Information report for AT5G43890
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Literature and News
- Interaction of auxin and ERECTA in elaborating Arabidopsis inflorescence architecture revealed by the activation tagging of a new member of the YUCCA family putative flavin monooxygenases. DOI: 10.1104/pp.105.063495 ; PMID: 16126863
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- ATHB4 and HAT3, two class II HD-ZIP transcription factors, control leaf development in Arabidopsis. DOI: 10.4161/psb.21824 ; PMID: 22918502
- A survey of dominant mutations in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2012.08.006 ; PMID: 22995285
- Auxin overproduction in shoots cannot rescue auxin deficiencies in Arabidopsis roots. DOI: 10.1093/pcp/pcu039 ; PMID: 24562917
- The importance of localized auxin production for morphogenesis of reproductive organs and embryos in Arabidopsis. DOI: 10.1093/jxb/erv256 ; PMID: 26019252
- YUCCA-mediated auxin biogenesis is required for cell fate transition occurring during de novo root organogenesis in Arabidopsis. DOI: 10.1093/jxb/erw213 ; PMID: 27255928
- Local Transcriptional Control of YUCCA Regulates Auxin Promoted Root-Growth Inhibition in Response to Aluminium Stress in Arabidopsis. DOI: 10.1371/journal.pgen.1006360 ; PMID: 27716807
- YUCCA auxin biosynthetic genes are required for Arabidopsis shade avoidance. DOI: 10.7717/peerj.2574 ; PMID: 27761349
- An Improved Recombineering Toolset for Plants. DOI: 10.1105/tpc.19.00431 ; PMID: 31666295
- Physiological, Metabolic, and Transcriptomic Analyses Reveal the Responses of Arabidopsis Seedlings to Carbon Nanohorns. DOI: 10.1021/acs.est.9b07133 ; PMID: 32182044
- The viral suppressor HCPro decreases DNA methylation and activates auxin biosynthesis genes. DOI: 10.1016/j.virol.2020.04.003 ; PMID: 32452413
- High temperature perception in leaves promotes vascular regeneration and graft formation in distant tissues. DOI: 10.1242/dev.200079 ; PMID: 35217857
- Tonoplast proton pumps regulate nuclear spacing of female gametophytes via mediating polar auxin transport in Arabidopsis. DOI: 10.3389/fpls.2022.1006735 ; PMID: 36176689
Gene Resources
- UniProt: A0A178UK83
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UK83
- EnsemblPlants: AT5G43890.1
- Gramene: AT5G43890.1
- KEGG: ath:AT5G43890
- Orthologous matrix: AYKIEDH
- ExpressionAtlas: AT5G43890
- InterPro: IPR020946, IPR036188, IPR050982
- PANTHER: PTHR43539, PTHR43539:SF74
- SUPFAM: SSF51905
- Gene3D: 3.50.50.60
- OrthoDB: A0A178UK83
- SWISS-MODEL: A0A178UK83
Sequences
cDNA Sequence
- >AT5G43890.1
CTAATCACAAGATCACATGCAAGTTCCTCTTACTTCGTCCACTATATAAACACATCCACCATTACTTCTTCCTCCAAACACATTCCAAAGCATCTCATTCCTCTATCAACAAACAAACAAAAAAAAAGCTTATTCAATTTCACTACCTATTCTTTTGATTCGATCAAAATCATCTTCTAAAGATACCTAAACTATTCCATTTTCACTACTTGTAATCTTGATTCGATCAAACTCACCCCTAAAGATGGAGAACATGTTTAGGCTCATGGGAAGTGAAGATTCCTCCGACAGAAGACGGTGCATTTGGGTTAACGGTCCTGTAATCGTCGGAGCCGGGCCATCGGGGCTAGCCACGGCAGCCTGCCTCCGCGAGGAAGGTGTTCCCTTTGTGGTATTGGAGAGAGCAGATTGCATAGCTTCACTATGGCAAAAACGAACTTACGATAGAATCAAACTTCATTTACCAAAGAAAGTTTGTCAATTACCCAAAATGCCCTTCCCGGAAGACTACCCGGAATATCCAACAAAACGACAGTTCATCGAGTACCTTGAGTCCTACGCAAACAAATTCGAAATTACTCCTCAGTTCAACGAGTGTGTCCAGTCTGCTCGATACGACGAGACAAGTGGTCTCTGGCGCATCAAGACAACATCTTCCTCTTCCTCGGGGTCGGAGATGGAATATATCTGCCGGTGGTTAGTGGTGGCGACGGGAGAAAACGCGGAGAAAGTTGTTCCAGAGATCGATGGGCTCACAACGGAGTTTGAAGGCGAGGTGATCCACTCGTGTGAGTACAAATCCGGCGAGAAATACAGAGGAAAGAGTGTTCTTGTCGTCGGATGTGGAAACTCCGGCATGGAAGTCTCTCTTGATCTCGCAAATCACAATGCTAATGCATCCATGGTTGTTCGTAGCTCGGTTCATGTGTTACCAAGAGAGATTTTAGGCAAATCTAGTTTTGAAATCTCCATGATGTTGATGAAGTGGTTTCCTCTGTGGCTAGTAGACAAGATTCTACTGATTCTTGCATGGCTGATTTTAGGAAATTTGACAAAGTATGGCCTAAAGAGGCCCACGATGGGCCCAATGGAGCTCAAGATTGTTTCAGGTAAGACTCCAGTTCTAGACATCGGAGCTATGGAGAAAATCAAATCCGGTGAAGTAGAAATCGTCCCGGGAATTAAACGGTTCTCTCGTAGTCACGTGGAGCTAGTAGACGGTCAGAGATTAGATCTCGATGCGGTGGTTCTGGCCACGGGTTACCGTAGCAACGTCCCATCATGGCTCCAAGAAAATGATCTGTTTTCGAAAAACGGGTTCCCGAAATCGCCGTTTCCAAACGCGTGGAAAGGGAAATCGGGACTTTACGCGGCTGGATTCACAAGGAAAGGATTGGCTGGAGCATCAGCAGACGCCGTTAACATCGCTCAAGATATTGGAAACGTGTGGAGAGAAGAAACCAAACGACAGAAAATGAGAACACGAGTGGGTCACCGCAGATGCATTTCAGTTGCTTAGGGCTCAAGTTAGGGCTCATACCATTATTTATTTTATTTTACCAAAGAGTGTTTATTCATTATTTCATTTTTTTTTGTAAACAAAGTATAAAGATACAAAGAGAGCCCTCTCCTGAAGACCCAACGGTGTTGTTTTTGAAGGCTGATTGGGCGTTTTGTATAACTTAGGATGACGTGGCATTTCTCTTCATTATTATTTTCTCTTCTGTTTTTCACTTTTTTAAAAAATCTATGTAATAATAAAAGATTCATACTCATAATTAAATGTCCTTTTCTTTTTAA
CDS Sequence
Protein Sequence