Information report for AT5G43760
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0006504 — leaf trichome — tricoma de hoja (Spanish, exact), 葉毛（毛茸、糸状体） (Japanese, exact), phyllid trichome (narrow)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020148 — shoot apical meristem — SAM (exact), meristema apical del epiblasto (epiblastema) (Spanish, exact), 茎頂分裂組織 (Japanese, exact), primary shoot meristem (related), promeristem (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- root , cauline leaf , rosette leaf , leaf trichome , fruit , flower , stem , anther , cotyledon , shoot apical meristem , guard cell
Literature and News
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Members of the Arabidopsis FAE1-like 3-ketoacyl-CoA synthase gene family substitute for the Elop proteins of Saccharomyces cerevisiae. DOI: 10.1074/jbc.M507723200 ; PMID: 16449229
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases. DOI: 10.1016/j.bbrc.2006.05.162 ; PMID: 16765910
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- The VLCFA elongase gene family in Arabidopsis thaliana: phylogenetic analysis, 3D modelling and expression profiling. DOI: 10.1007/s11103-008-9339-z ; PMID: 18465198
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Two Arabidopsis 3-ketoacyl CoA synthase genes, KCS20 and KCS2/DAISY, are functionally redundant in cuticular wax and root suberin biosynthesis, but differentially controlled by osmotic stress. DOI: 10.1111/j.1365-313X.2009.03973.x ; PMID: 19619160
- Inhibition of saturated very-long-chain fatty acid biosynthesis by mefluidide and perfluidone, selective inhibitors of 3-ketoacyl-CoA synthases. DOI: 10.1016/j.phytochem.2011.12.023 ; PMID: 22284369
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- AP2/ERF transcription factors orchestrate very long chain fatty acid biosynthesis during Arabidopsis lateral root development. DOI: 10.1016/j.molp.2021.01.004 ; PMID: 33450371
- Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. DOI: 10.3389/fpls.2023.1107333 ; PMID: 36798704
- A jojoba beta-Ketoacyl-CoA synthase cDNA complements the canola fatty acid elongation mutation in transgenic plants. DOI: 10.1105/tpc.8.2.281 ; PMID: 8742713
- Profiling candidate genes involved in wax biosynthesis in Arabidopsis thaliana by microarray analysis. DOI: 10.1016/j.bbalip.2005.04.002 ; PMID: 15914083
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A178UE45
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UE45
- EnsemblPlants: AT5G43760.1
- Gramene: AT5G43760.1
- KEGG: ath:AT5G43760
- Orthologous matrix: HTVRTHS
- ExpressionAtlas: AT5G43760
- InterPro: IPR012392, IPR013601, IPR013747
- PANTHER: PTHR31561
- SUPFAM: SSF53901
- Gene3D: 3.40.47.10
- OrthoDB: A0A178UE45
- SWISS-MODEL: A0A178UE45
- Conserved Domain Database: cd00831
Sequences
cDNA Sequence
- >AT5G43760.1
GTACTGTCCTAAACAAAATTGCTTGACTAGATTGAACAGAAAATGTTTTTGATGTCTTACTAGTTTGAACAATTTATTTGCTAACATTATTCTCTTTGTATATTTCTTAAAAACCCATATTTTTTCCTTAAATATTTCCCATTTCCCCTAACTACATTCAATAGCTAAGTCTCTCTCTCCCTCTCTCTTTCTCTCTCACTCAAAAATTTCCCATTAAATTCTCAAATTTTCTCCAACTTTTTAGGCCATTCTCTTTTCTCCTCTCTCTCTCTCTCACACAACACAAACAACTCTTGAGAGAGAGAAACAAATCTTTCACTTGACACTTCTCTCCAAATCCTCATCTCATTCTTCATCCTAAACATTTGCTCATTCTCACGATGAGCCATAACCAAAACCAACCTCACCGGCCAGTCCCGGTCCATGTCACAAACGCCGAGCCAAACCCTAACCCAAACAACCTCCCAAACTTTCTATTATCCGTCCGTCTCAAATACGTAAAACTCGGTTACCACTACCTAATCTCCAACGCTCTCTACATCCTCCTCCTTCCTCTCCTCGCCGCAACAATCGCTAACCTCTCTTCTTTCACCATCAACGACCTCTCTCTCCTCTACAACACACTCCGTTTCCATTTCCTCTCCGCCACACTCGCCACCGCACTCTTAATCTCTCTCTCCACCGCTTACTTCACCACCCGTCCCCGCCGTGTCTTCCTCCTCGACTTCTCGTGTTACAAACCAGACCCTTCACTGATCTGCACTCGTGAAACATTCATGGACAGATCTCAACGTGTAGGCATCTTCACAGAAGACAACTTAGCTTTCCAACAAAAGATCCTCGAAAGATCCGGTCTAGGTCAGAAAACTTACTTCCCTGAAGCTCTTCTTCGTGTTCCTCCTAATCCTTGTATGGAAGAAGCGAGAAAAGAGGCAGAAACAGTTATGTTCGGAGCTATTGACGCGGTTCTTGAGAAGACCGGTGTGAAACCTAAAGATATTGGAATCCTTGTGGTGAATTGTAGCTTGTTTAATCCAACACCGTCACTTTCTGCTATGATTGTGAATAAGTATAAGCTTAGAGGCAACATTTTGAGCTATAATCTTGGTGGAATGGGATGTAGTGCTGGCCTTATCTCCATTGATCTCGCTAAACAGATGCTTCAGGTGCAACCAAACTCATACGCACTAGTGGTGAGCACAGAGAACATAACCCTAAACTGGTACTTAGGCAACGACCGATCAATGCTTCTATCTAACTGTATCTTCCGTATGGGCGGAGCCGCGGTACTTCTCTCGAACCGCTCCTCTGATCGCAGCCGTTCAAAATATCAGCTCATCCATACCGTCCGTACCCACAAAGGAGCTGATGACAACGCATTTGGCTGTGTTTACCAACGAGAAGACAACAACGCAGAAGAAACCGGCAAAATCGGAGTGTCCCTCTCTAAAAACCTAATGGCGATAGCTGGAGAAGCTCTCAAGACAAACATCACAACTCTCGGACCACTAGTTCTACCAATGTCCGAACAACTTCTCTTTTTCGCGACTCTTGTGGCCCGAAAAGTCTTCAAAGTCAAGAAAATAAAGCCTTACATTCCTGATTTCAAGCTAGCTTTCGAGCATTTCTGTATCCACGCGGGAGGTAGAGCCGTGCTCGACGAGATTGAGAAGAACTTGGATTTATCCGAATGGCACATGGAGCCATCGAGGATGACGTTGAACCGGTTTGGTAACACTTCGAGTAGCTCACTTTGGTATGAGCTTGCGTATAGTGAAGCTAAAGGAAGGATTAAGAGAGGAGATAGGACTTGGCAGATTGCTTTTGGATCGGGTTTTAAGTGTAATAGTGCAGTTTGGAAAGCTTTGAGAACGATTGATCCAATGGACGAGAAGACTAATCCATGGATTGATGAGATTGATGACTTTCCTGTTCAAGTTCCTAGGATCACTCCCATTACATCGTCGTAGTGTTTTAAATTCTTTTGGAGAACTAATTTGTTATGTTTTATTAAATGTAATAACTTACGTGATTTGATATTTTTTTATTATCTTAATATATATGATTGCCAATTTGCCATATGTGAGTTCGAGATTAGTGATGTGTAACATGAGTTTATTCATTCACACAAGAAGAGTCTTGTGTCACATTTGGTACTTTGCCACGTTGTTTGATTGCATGTTAAACCACAAGGCAACGTATATGGTTCTTGGTGCC
CDS Sequence
Protein Sequence