Information report for AT5G43710
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Class I alpha-mannosidases are required for N-glycan processing and root development in Arabidopsis thaliana. DOI: 10.1105/tpc.109.072363 ; PMID: 20023195
- Arabidopsis Class I α-Mannosidases MNS4 and MNS5 Are Involved in Endoplasmic Reticulum-Associated Degradation of Misfolded Glycoproteins. DOI: 10.1105/tpc.114.123216 ; PMID: 24737672
- A context-independent N-glycan signal targets the misfolded extracellular domain of Arabidopsis STRUBBELIG to endoplasmic-reticulum-associated degradation. DOI: 10.1042/BJ20141057 ; PMID: 25251695
- A Predominant Role of AtEDEM1 in Catalyzing a Rate-Limiting Demannosylation Step of an Arabidopsis Endoplasmic Reticulum-Associated Degradation Process. DOI: 10.3389/fpls.2022.952246 ; PMID: 35874007
Gene Resources
- UniProt: A0A1P8BC90
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BC90
- EnsemblPlants: AT5G43710.2
- Gramene: AT5G43710.2
- Orthologous matrix: HNYHRVW
- ExpressionAtlas: AT5G43710
- InterPro: IPR001382, IPR012341, IPR036026
- PANTHER: PTHR45679, PTHR45679:SF6
- SUPFAM: SSF48225
- Gene3D: 1.50.10.10
- SWISS-MODEL: A0A1P8BC90
Sequences
cDNA Sequence
- >AT5G43710.2
GATTTGTTGAATTGTGATTGAAGGACGAGGCACCGAGTGACGCAGTTGAAAAACTCAAGAATCTCCTCGGACAAGAGCAGAGATCCAGAGTGATGTCTGAGAAGATTCATTCAACACATTAACGAAACTCCCCAAAATAGCTTTTATTGATGGACTCAAATTTCAAGTGGCTTTTGTTTGCCATCTTGATCTCTCTGACATTTTCGGGTTTTGTTCTTCACCATGGAGTTCTCGCTGAAAGTGTTAAGCCTGATGAAGCTAAACAGCTTAGAGACGAGGTACGTGGGATGTTTTATCATGCCTTTGATGGATATATGAACAATGCGTTTCCACTCGATGAATTGAGACCGTTATCTTGCCAAGGAGAAGATACTCTTGGAGGCTATGCGTTGACTCTGATTGACTCGTTGGATACATTAGCTTTACTTGGTGACCGAGAGCGCTTCACTTCTTCTGTTGAATGGATTGGTAAAAATCTTCAGTTTAATATAAATAAAACAGTCTCTGTGTTTGAGACAACTATCCGAGTCCTTGGGGGGTTACTATCTGCTCATCTGATTGCAAGTGATTATGCAACGGGCATGAGAATTCCATCTTACAACAATGAATTACTAGTTTTGGCTGAGAATTTGGCACGGAGAATGCTTCCTGCATTTGATACACCGACTGGAATCCCATTTGGATCTGTGAATTTGATGTACGGTGTTGACAAACATGAAAGCAAGATAACATCAACTGCCGGTGGTGGTACTTTGTCTTTAGAGTTTGGCGTGCTTAGTCGTTTAACAAATGATCCTGTTTTCGAACAAGTTGCAAAGAATGCGGTGAGGGGACTATGGGCACGTCGTTCAAATCTCGACTTGGTTGGTGCTCACATCAATGTCTTTACAGGTGAATGGACACAGAAGGATGCTGGTATAGGAACAAGCATTGATTCCTTCTATGAGTATCTACTCAAGGCTTATATACTATTTGGGGATGAGGAATATCTATACATTTTTCAAGAAGCTTATAGATCTGCAATGCAGTACCTTCACAAGGATCCTTGGTATGTAGAAGTCAATATGGATTCCGCAGCTATTGTCTGGCCAGTATTTAACAGCCTTCAAGCTTTCTGGCCAGGACTTCAGGTTTTAGCTGGAGACGTTGATCCAGCAATAAGAACTCACACTGCCTTCTTTAGCGTCTGGAAACGATATGGTTTCACCCCTGAGGGTTTTAATCTTGCTACACTTAGTGTCCAGTATGGGCAAAAGAGTTATCCCTTAAGGCCGGAATTAATCGAGAGTACATACTGGTTGTACAAAGCTACCAGAGATCCCAGGTATCTTGATGCAGGACGTGACTTTGTGGCTAGTTTGCAATACGGGGCAAAATGTCCTTGCGGTTATTGTCACATCACAGATGTAGAACTGCATAAACAAGAAGATCACATGGAGAGCTTCTTCCTCGCAGAAACGGTGAAGTACTTATGGCTACTCTTTGACTTAGCTGTTGACTCGGATAACCTCGTAGACAATGGCCCTTACAAGTACATCTTCAGTACTGAGGGTCATCTCTTACCAATAACACCACAAATATCTCTAGCTCGGGAACATTGCTCTTACTTTGGTGGATACTGTCCAAGCAATTCCACAAAACTAGAACAAGAAGTCCTTGGAGAAGACAGTAGTAACGATGATCACAGTAACGATTATCCTTACCACGAATCTTTTCCAGTTACCGGTTTGATAAAGGCCAGTACCAGAAATAAAAATATTTCTTTCTTTCATCAAAGTCAGTTTCTTTTGTTTTGGGGTTTTTGTAGGGTTTATGTCCAGGACTAACACATGCTCAGAAATATGGTTTTTCGTATGTTCTACCGGAGAAGACAGATCGTGAAGATGTTAATCAACCTAAACCGGTAGTTACAAGCAGTTCAATTGTGTTAATCTCGGATCAAACAGTGGAGAAGAGACCACAGGAAGAAGAAGGATTTACTTCTCAGTCTGAACCAATAATGACAATCTCTGGTGGTAGTAGCAACGACCAAACAGGTCAAGAGCTAACCTTGTTAGAGTCAGAAACTGATGATCAAAGATCATACTCTTCTTAAATCTCTCATTTATATATATGTTCCACAGAAGAAGATTACAAAAACTTTTGTTAGAAATATAGATTCAGTTTTCCAATCTCATCAAGAATCTTGAATCCTTCTTTTGTTGATCGATTGTTGTCTCATCATAATCATCATCATCATCATCG - >AT5G43710.1
GATTTGTTGAATTGTGATTGAAGGACGAGGCACCGAGTGACGCAGTTGAAAAACTCAAGAATCTCCTCGGACAAGAGCAGAGATCCAGAGTGATGTCTGAGAAGATTCATTCAACACATTAACGAAACTCCCCAAAATAGCTTTTATTGATGGACTCAAATTTCAAGTGGCTTTTGTTTGCCATCTTGATCTCTCTGACATTTTCGGGTTTTGTTCTTCACCATGGAGTTCTCGCTGAAAGTGTTAAGCCTGATGAAGCTAAACAGCTTAGAGACGAGGTACGTGGGATGTTTTATCATGCCTTTGATGGATATATGAACAATGCGTTTCCACTCGATGAATTGAGACCGTTATCTTGCCAAGGAGAAGATACTCTTGGAGGCTATGCGTTGACTCTGATTGACTCGTTGGATACATTAGCTTTACTTGGTGACCGAGAGCGCTTCACTTCTTCTGTTGAATGGATTGGTAAAAATCTTCAGTTTAATATAAATAAAACAGTCTCTGTGTTTGAGACAACTATCCGAGTCCTTGGGGGGTTACTATCTGCTCATCTGATTGCAAGTGATTATGCAACGGGCATGAGAATTCCATCTTACAACAATGAATTACTAGTTTTGGCTGAGAATTTGGCACGGAGAATGCTTCCTGCATTTGATACACCGACTGGAATCCCATTTGGATCTGTGAATTTGATGTACGGTGTTGACAAACATGAAAGCAAGATAACATCAACTGCCGGTGGTGGTACTTTGTCTTTAGAGTTTGGCGTGCTTAGTCGTTTAACAAATGATCCTGTTTTCGAACAAGTTGCAAAGAATGCGGTGAGGGGACTATGGGCACGTCGTTCAAATCTCGACTTGGTTGGTGCTCACATCAATGTCTTTACAGGTGAATGGACACAGAAGGATGCTGGTATAGGAACAAGCATTGATTCCTTCTATGAGTATCTACTCAAGGCTTATATACTATTTGGGGATGAGGAATATCTATACATTTTTCAAGAAGCTTATAGATCTGCAATGCAGTACCTTCACAAGGATCCTTGGTATGTAGAAGTCAATATGGATTCCGCAGCTATTGTCTGGCCAGTATTTAACAGCCTTCAAGCTTTCTGGCCAGGACTTCAGGTTTTAGCTGGAGACGTTGATCCAGCAATAAGAACTCACACTGCCTTCTTTAGCGTCTGGAAACGATATGGTTTCACCCCTGAGGGTTTTAATCTTGCTACACTTAGTGTCCAGTATGGGCAAAAGAGTTATCCCTTAAGGCCGGAATTAATCGAGAGTACATACTGGTTGTACAAAGCTACCAGAGATCCCAGGTATCTTGATGCAGGACGTGACTTTGTGGCTAGTTTGCAATACGGGGCAAAATGTCCTTGCGGTTATTGTCACATCACAGATGTAGAACTGCATAAACAAGAAGATCACATGGAGAGCTTCTTCCTCGCAGAAACGGTGAAGTACTTATGGCTACTCTTTGACTTAGCTGTTGACTCGGATAACCTCGTAGACAATGGCCCTTACAAGTACATCTTCAGTACTGAGGGTCATCTCTTACCAATAACACCACAAATATCTCTAGCTCGGGAACATTGCTCTTACTTTGGTGGATACTGTCCAAGCAATTCCACAAAACTAGAACAAGAAGTCCTTGGAGAAGACAGTAGTAACGATGATCACAGTAACGATTATCCTTACCACGAATCTTTTCCAGTTACCGGTTTGATAAAGGCCAGTACCAGAAATAAAAATATTTCTTTCTTTCATCAAAGTCAGTTTCTTTTGTTTTGGGGTTTTTGTAGGGTTTATGTCCAGGACTAACACATGCTCAGAAATATGGTTTTTCGTATGTTCTACCGGAGAAGACAGATCGTGAAGATGTTAATCAACCTAAACCGGTAGTTACAAGCAGTTCAATTGTGTTAATCTCGGATCAAACAGTGGAGAAGAGACCACAGGAAGAAGAAGGATTTACTTCTCAGTCTGAACCAATAATGACAATCTCTGGTGGTAGTAGCAACGACCAAACAGGTCAAGAGCTAACCTTGTTAGAGTCAGAAACTGATGATCAAAGATCATACTCTTCTTAAATCTCTCATTTATATATATGTTCCACAGAAGAAGATTACAAAAACTTTTGTTAGAAATATAGATTCAGTTTTCCAATCTCATCAAGAATCTTGAATCCTTCTTTTGTTGATCGATTGTTGTCTCATCATAATCATCATCATCATCATCG - >AT5G43710.3
GATTTGTTGAATTGTGATTGAAGGACGAGGCACCGAGTGACGCAGTTGAAAAACTCAAGAATCTCCTCGGACAAGAGCAGAGATCCAGAGTGATGTCTGAGAAGATTCATTCAACACATTAACGAAACTCCCCAAAATAGCTTTTATTGATGGACTCAAATTTCAAGTGGCTTTTGTTTGCCATCTTGATCTCTCTGACATTTTCGGGTTTTGTTCTTCACCATGGAGTTCTCGCTGAAAGTGTTAAGCCTGATGAAGCTAAACAGCTTAGAGACGAGGTACGTGGGATGTTTTATCATGCCTTTGATGGATATATGAACAATGCGTTTCCACTCGATGAATTGAGACCGTTATCTTGCCAAGGAGAAGATACTCTTGGAGGCTATGCGTTGACTCTGATTGACTCGTTGGATACATTAGCTTTACTTGGTGACCGAGAGCGCTTCACTTCTTCTGTTGAATGGATTGGTAAAAATCTTCAGTTTAATATAAATAAAACAGTCTCTGTGTTTGAGACAACTATCCGAGTCCTTGGGGGGTTACTATCTGCTCATCTGATTGCAAGTGATTATGCAACGGGCATGAGAATTCCATCTTACAACAATGAATTACTAGTTTTGGCTGAGAATTTGGCACGGAGAATGCTTCCTGCATTTGATACACCGACTGGAATCCCATTTGGATCTGTGAATTTGATGTACGGTGTTGACAAACATGAAAGCAAGATAACATCAACTGCCGGTGGTGGTACTTTGTCTTTAGAGTTTGGCGTGCTTAGTCGTTTAACAAATGATCCTGTTTTCGAACAAGTTGCAAAGAATGCGGTGAGGGGACTATGGGCACGTCGTTCAAATCTCGACTTGGTTGGTGCTCACATCAATGTCTTTACAGGTGAATGGACACAGAAGGATGCTGGTATAGGAACAAGCATTGATTCCTTCTATGAGTATCTACTCAAGGCTTATATACTATTTGGGGATGAGGAATATCTATACATTTTTCAAGAAGCTTATAGATCTGCAATGCAGTACCTTCACAAGGATCCTTGGTATGTAGAAGTCAATATGGATTCCGCAGCTATTGTCTGGCCAGTATTTAACAGCCTTCAAGCTTTCTGGCCAGGACTTCAGGTTTTAGCTGGAGACGTTGATCCAGCAATAAGAACTCACACTGCCTTCTTTAGCGTCTGGAAACGATATGGTTTCACCCCTGAGGGTTTTAATCTTGCTACACTTAGTGTCCAGTATGGGCAAAAGAGTTATCCCTTAAGGCCGGAATTAATCGAGAGTACATACTGGTTGTACAAAGCTACCAGAGATCCCAGGTATCTTGATGCAGGACGTGACTTTGTGGCTAGTTTGCAATACGGGGCAAAATGTCCTTGCGGTTATTGTCACATCACAGATGTAGAACTGCATAAACAAGAAGATCACATGGAGAGCTTCTTCCTCGCAGAAACGGTGAAGTACTTATGGCTACTCTTTGACTTAGCTGTTGACTCGGATAACCTCGTAGACAATGGCCCTTACAAGTACATCTTCAGTACTGAGGGTCATCTCTTACCAATAACACCACAAATATCTCTAGCTCGGGAACATTGCTCTTACTTTGGTGGATACTGTCCAAGCAATTCCACAAAACTAGAACAAGAAGTCCTTGGAGAAGACAGTAGTAACGATGATCACAGTAACGATTATCCTTACCACGAATCTTTTCCAGTTACCGGTTTGATAAAGGCCAGTACCAGAAATAAAAATATTTCTTTCTTTCATCAAAGTCAGTTTCTTTTGTTTTGGGGTTTTTGTAGGGTTTATGTCCAGGACTAACACATGCTCAGAAATATGGTTTTTCGTATGTTCTACCGGAGAAGACAGATCGTGAAGATGTTAATCAACCTAAACCGGTAGTTACAAGCAGTTCAATTGTGTTAATCTCGGATCAAACAGTGGAGAAGAGACCACAGGAAGAAGAAGGATTTACTTCTCAGTCTGAACCAATAATGACAATCTCTGGTGGTAGTAGCAACGACCAAACAGGTCAAGAGCTAACCTTGTTAGAGTCAGAAACTGATGATCAAAGATCATACTCTTCTTAAATCTCTCATTTATATATATGTTCCACAGAAGAAGATTACAAAAACTTTTGTTAGAAATATAGATTCAGTTTTCCAATCTCATCAAGAATCTTGAATCCTTCTTTTGTTGATCGATTGTTGTCTCATCATAATCATCATCATCATCATCG
CDS Sequence
Protein Sequence