Gene Details:
- Gene ID: AT5G43560
- Gene Symbol: MUSE14, TRAF1a
- Gene Name: Tumor necrosis factor Receptor-Associated Factor 1a
- Description: TRAF-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Function-related keywords:
Literature:
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Plant TRAF Proteins Regulate NLR Immune Receptor Turnover. DOI: 10.1016/j.chom.2016.01.005 ; PMID: 26867179
- TRAF Family Proteins Regulate Autophagy Dynamics by Modulating AUTOPHAGY PROTEIN6 Stability in Arabidopsis. DOI: 10.1105/tpc.17.00056 ; PMID: 28351989
- SCF(SNIPER4) controls the turnover of two redundant TRAF proteins in plant immunity. DOI: 10.1111/tpj.13965 ; PMID: 29770510
- The phosphatidylinositol 3-phosphate effector FYVE3 regulates FYVE2-dependent autophagy in Arabidopsis thaliana. DOI: 10.3389/fpls.2023.1160162 ; PMID: 37008475
Sequences:
cDNA Sequence
- >AT5G43560.1
GCTCTTTCTTCAATCATCTCCAGGTTTGCTTCGATCTACACGGCGTCGTTTACACGTCTCCTTCAAATCTTTCTTCCTTACTTCTCCGATTTCAATTTCGTGCCGTTTTTTTTTTGAGTTTTCCGATCGCTGATTTCTTCAAATATTTATCGAATTTTTTTTCAATGTTTTCTGTTTGTAAATTCTCTGTAATTCAATTAATTGAATCGAATAATTTTGTCTCTCTTGCATTTCCTCAGCTCCAGCTTTTGTTTTTATTAGTTTCTAAGATTGCTTTTTGTTTTTAGGGTTTATTCTCAATTCTTATATAGTTTTTGAGGTTTTTGGTGTATTGATTTGATTCATGTGAGTGAGTGATTGATTTAGAATCTTTGTTGAGCTGTGACTGTGATTTAGATTTGATTCACTTCAGCTATAATTCTTTGTTTTGATGATGATTATGATAAATTCGTAATTTTGAGCTTATTTGAATTCATTAACTAATTTAGTATGATGAAATCTTAATCAGGGGAATGTCAGAGAGTACTAATGAAGATAGTGGAGCAGGAAGATCATCACTGGAAGAGAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGCAATCGCTGAGTGGCGTTCTTCTGAACAAGTTGAGAATGGAACTCCTTCTACATCTCCACCGTATTGGGACATCGATGATGATGACGATTTTGGATCAAAACCATCTCAACTATTTGGGAAAAATACTTGGACGATTGAGAAATTTTCAGATATCAACAAACGAGAGCTCCGCGGCGATGTTTTTGAAGTCGGGGGTTACAAATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTATGTGTTGCACACCATGAAAAGCTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTGTCGAATAAAGATCCGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTGGAAGAAAGAGCATGATTGGGGTTGGAAGAAATTTATTGAGTTACCTAAATTGAAGGAAGGGTTTATAGATGATTCTGGTTGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGAGAGTGGACCGACCTTTTCGCTGCCTTCATTATAAATATAGGGAGGAACTTGTTAGGGTGTATTTGGGAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTGGTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACACTTCTTTGTCGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATAGTGGATTGAAGGCTCTTGAAGGCCAAAATAAGAACAAGGAGAGTAGGCCGAGACTAATGGATACTGAAGAATCCACAGCTCCAATTGTTAGCGTGGACAAAGATTCGTTTGCATTAGTTGATGATGTGTTATTACTCTTAGAGAAGGCTGCTCTGGAGCCATTGCCTAAAAAAGAGGAAAAGAGTTCTCAAAACCGTACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCCGTTGAGCGTGATGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTTCTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAAAGGCAAGAAGAACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAGGGCAAAAGAGGAGCATCTGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAAAAGAACAAAAACAAAGGAAAGGAAATGAGGAAAGAAGACAAGGTGAGAACCCAAACAGAAGAAAGGGAAATTGAGAAAGAGGAATGTGTGAGAGCGATAGCAGAATCGTCAGCTGAAAAACCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGATAGTTCAGCTGAAATACTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATGGATGCCTCAGAGGTTCATCCTCCTTCTGCAGGAGACACTAGCAGAGGAAGAGGCAATTCTTTTTCTATACCTAATGGAGTTGCAGAAAGAAAGGGTCTGTCCACAATGGATGATAGTTCTTCAACCTGTTCTAATGACTCGATTCAATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTATTAAATTGCCAAAGCCAAAAGTGGTTTAGCAATGGAAAAATACAACCAGGAAAAGTATCTGATTCCAACAGTTTAGCCAGTGAAAAAGAGCATCAACCTTCAAGACTTGCATCTGACCCTAAAAATCAGAGCCATTCTTCTGATATACGCAGAGTTGGTGAAGCTGACATAGTTATCTCCCACATTCAAAAACCAGAGAGCCCTAAGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGATTCAGATGAAAGAGAAAAGTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCCTCCGTCTCCAGTGCAAGCAAAACCGGAGAAAAAGGGTGTTTCAAATGTAGAGGCGGTTCCAAACAGGAAAGTCATATCTGTTAAATCACCTTCATCACATCATGCATCACCATCTCGTGAAGCTCAGTTGCAAACAGTGGGTCCTAGAGCTGATATACAGAAAATCGCTTCTCCGAAACCTGTGGAACAACCAGCACCTCCTATGTCAAGGCCTTTGAGTGCTCCTATAATCCCTCCAACGCAAGCTGCACCTGTAATATCTGCTGTTCAAACCTCGACTGCGTCCCTTGCTCGTTCAATGAGCTCAACAGGGCGTTTAGGTTCACCGACACATAGCCAAGCTTACAATCCTCAATCCTACAAACATGCCATAGTGGGTTCATCTGGTTTCACCCACCCAAGCTCTCAATCGAGTGGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAATCAGTCTGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTATTGTGGACCGGTGGTTCGAGTTCAACCAGAGATACAACAACAACCATCAGCGGGAATCACAAAACAAACACTTACAACGCACCCGTAGTAACTACCAGCATCAGGCCTACTAATGTTCAGATAGGGAGAACGGCACAGAGTCTGATGACCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGCAGACGAACACGGTACAATGGATAATAGCGTATACCGTGTACCACAACAGTTCAACAACCAGTACTCATATCATGGCGGTGCGGATCTCGGGATCTCTAGCAGGTCTAGGAGTTACAGTGATGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGCTTCTTCCTCGCCATATGGTAATGGGCAAACACAATCGCAATGGCAGATGGCAAATATGGATTTCTCTTTACCGGCTATGAGGAACCAAGACGATGTATCAGCATCAGCAACAGCTACTTACTCTTACTTTGATTTAGATTCATCAAACCCGAATTTGTCTGGAATCAACGGCTATAGGGACTTCAGGCCATCGAACGGACACTGAGGTTTGGGTTTAAAGAGTGGCATTGCATTGTAATGTTTATTATATAAAGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAATCCTTTTTTCTCT - >AT5G43560.2
GCTCTTTCTTCAATCATCTCCAGGTTTGCTTCGATCTACACGGCGTCGTTTACACGTCTCCTTCAAATCTTTCTTCCTTACTTCTCCGATTTCAATTTCGTGCCGTTTTTTTTTTGAGTTTTCCGATCGCTGATTTCTTCAAATATTTATCGAATTTTTTTTCAATGTTTTCTGTTTGTAAATTCTCTGTAATTCAATTAATTGAATCGAATAATTTTGTCTCTCTTGCATTTCCTCAGCTCCAGCTTTTGTTTTTATTAGTTTCTAAGATTGCTTTTTGTTTTTAGGGTTTATTCTCAATTCTTATATAGTTTTTGAGGTTTTTGGTGTATTGATTTGATTCATGTGAGTGAGTGATTGATTTAGAATCTTTGTTGAGCTGTGACTGTGATTTAGATTTGATTCACTTCAGCTATAATTCTTTGTTTTGATGATGATTATGATAAATTCGTAATTTTGAGCTTATTTGAATTCATTAACTAATTTAGTATGATGAAATCTTAATCAGGGGAATGTCAGAGAGTACTAATGAAGATAGTGGAGCAGGAAGATCATCACTGGAAGAGAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGCAATCGCTGAGTGGCGTTCTTCTGAACAAGTTGAGAATGGAACTCCTTCTACATCTCCACCGTATTGGGACATCGATGATGATGACGATTTTGGATCAAAACCATCTCAACTATTTGGGAAAAATACTTGGACGATTGAGAAATTTTCAGATATCAACAAACGAGAGCTCCGCGGCGATGTTTTTGAAGTCGGGGGTTACAAATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTATGTGTTGCACACCATGAAAAGCTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTGTCGAATAAAGATCCGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTGGAAGAAAGAGCATGATTGGGGTTGGAAGAAATTTATTGAGTTACCTAAATTGAAGGAAGGGTTTATAGATGATTCTGGTTGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGAGAGTGGACCGACCTTTTCGCTGCCTTCATTATAAATATAGGGAGGAACTTGTTAGGGTGTATTTGGGAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTGGTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACACTTCTTTGTCGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATAGTGGATTGAAGGCTCTTGAAGGCCAAAATAAGAACAAGGAGAGTAGGCCGAGACTAATGGATACTGAAGAATCCACAGCTCCAATTGTTAGCGTGGACAAAGATTCGTTTGCATTAGTTGATGATGTGTTATTACTCTTAGAGAAGGCTGCTCTGGAGCCATTGCCTAAAAAAGAGGAAAAGAGTTCTCAAAACCGTACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCCGTTGAGCGTGATGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTTCTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAAAGGCAAGAAGAACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAGGGCAAAAGAGGAGCATCTGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAAAAGAACAAAAACAAAGGAAAGGAAATGAGGAAAGAAGACAAGGTGAGAACCCAAACAGAAGAAAGGGAAATTGAGAAAGAGGAATGTGTGAGAGCGATAGCAGAATCGTCAGCTGAAAAACCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGATAGTTCAGCTGAAATACTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATGGATGCCTCAGAGGTTCATCCTCCTTCTGCAGGAGACACTAGCAGAGGAAGAGGCAATTCTTTTTCTATACCTAATGGAGTTGCAGAAAGAAAGGGTCTGTCCACAATGGATGATAGTTCTTCAACCTGTTCTAATGACTCGATTCAATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTATTAAATTGCCAAAGCCAAAAGTGGTTTAGCAATGGAAAAATACAACCAGGAAAAGTATCTGATTCCAACAGTTTAGCCAGTGAAAAAGAGCATCAACCTTCAAGACTTGCATCTGACCCTAAAAATCAGAGCCATTCTTCTGATATACGCAGAGTTGGTGAAGCTGACATAGTTATCTCCCACATTCAAAAACCAGAGAGCCCTAAGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGATTCAGATGAAAGAGAAAAGTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCCTCCGTCTCCAGTGCAAGCAAAACCGGAGAAAAAGGGTGTTTCAAATGTAGAGGCGGTTCCAAACAGGAAAGTCATATCTGTTAAATCACCTTCATCACATCATGCATCACCATCTCGTGAAGCTCAGTTGCAAACAGTGGGTCCTAGAGCTGATATACAGAAAATCGCTTCTCCGAAACCTGTGGAACAACCAGCACCTCCTATGTCAAGGCCTTTGAGTGCTCCTATAATCCCTCCAACGCAAGCTGCACCTGTAATATCTGCTGTTCAAACCTCGACTGCGTCCCTTGCTCGTTCAATGAGCTCAACAGGGCGTTTAGGTTCACCGACACATAGCCAAGCTTACAATCCTCAATCCTACAAACATGCCATAGTGGGTTCATCTGGTTTCACCCACCCAAGCTCTCAATCGAGTGGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAATCAGTCTGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTATTGTGGACCGGTGGTTCGAGTTCAACCAGAGATACAACAACAACCATCAGCGGGAATCACAAAACAAACACTTACAACGCACCCGTAGTAACTACCAGCATCAGGCCTACTAATGTTCAGATAGGGAGAACGGCACAGAGTCTGATGACCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGCAGACGAACACGGTACAATGGATAATAGCGTATACCGTGTACCACAACAGTTCAACAACCAGTACTCATATCATGGCGGTGCGGATCTCGGGATCTCTAGCAGGTCTAGGAGTTACAGTGATGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGCTTCTTCCTCGCCATATGGTAATGGGCAAACACAATCGCAATGGCAGATGGCAAATATGGATTTCTCTTTACCGGCTATGAGGAACCAAGACGATGTATCAGCATCAGCAACAGCTACTTACTCTTACTTTGATTTAGATTCATCAAACCCGAATTTGTCTGGAATCAACGGCTATAGGGACTTCAGGCCATCGAACGGACACTGAGGTTTGGGTTTAAAGAGTGGCATTGCATTGTAATGTTTATTATATAAAGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAATCCTTTTTTCTCT
CDS Sequence
Protein Sequence