Information report for AT5G43270
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Molecular characterisation of the Arabidopsis SBP-box genes. DOI: 10.1016/s0378-1119(99)00308-x ; PMID: 10524240
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. DOI: 10.1016/s1534-5807(03)00025-x ; PMID: 12586064
- The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing. DOI: 10.1016/j.cub.2004.01.035 ; PMID: 14972688
- A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors. DOI: 10.1016/j.jmb.2004.01.015 ; PMID: 15001351
- A systemic small RNA signaling system in plants. DOI: 10.1105/tpc.104.023614 ; PMID: 15258266
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- The microRNA regulated SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis. DOI: 10.1007/s11103-008-9310-z ; PMID: 18278578
- Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana. DOI: 10.1105/tpc.108.058180 ; PMID: 18492871
- Arabidopsis SBP-box genes SPL10, SPL11 and SPL2 control morphological change in association with shoot maturation in the reproductive phase. DOI: 10.1093/pcp/pcp148 ; PMID: 19880401
- miR156-targeted and nontargeted SBP-box transcription factors act in concert to secure male fertility in Arabidopsis. DOI: 10.1105/tpc.110.079343 ; PMID: 21177480
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Differential SPL gene expression patterns reveal candidate genes underlying flowering time and architectural differences in Mimulus and Arabidopsis. DOI: 10.1016/j.ympev.2014.01.029 ; PMID: 24508602
- Arabidopsis miR156 Regulates Tolerance to Recurring Environmental Stress through SPL Transcription Factors. DOI: 10.1105/tpc.114.123851 ; PMID: 24769482
- Interaction between two timing microRNAs controls trichome distribution in Arabidopsis. DOI: 10.1371/journal.pgen.1004266 ; PMID: 24699192
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Developmental Functions of miR156-Regulated SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) Genes in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1006263 ; PMID: 27541584
- SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 controls floral organ development and plant fertility by activating ASYMMETRIC LEAVES 2 in Arabidopsis thaliana. DOI: 10.1007/s11103-016-0536-x ; PMID: 27605094
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Arabidopsis Transcription Factors SPL1 and SPL12 Confer Plant Thermotolerance at Reproductive Stage. DOI: 10.1016/j.molp.2017.03.010 ; PMID: 28400323
- Alterations of plant architecture and phase transition by the phytoplasma virulence factor SAP11. DOI: 10.1093/jxb/ery318 ; PMID: 30165491
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- AP2/ERF Transcription Factors Integrate Age and Wound Signals for Root Regeneration. DOI: 10.1105/tpc.19.00378 ; PMID: 31649122
- Distinct function of SPL genes in age-related resistance in Arabidopsis. DOI: 10.1371/journal.ppat.1011218 ; PMID: 36947557
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A5S9YAG8
- EMBL: CACSHJ010000096
- AlphaFoldDB: A0A5S9YAG8
- EnsemblPlants: AT5G43270.1, AT5G43270.2, AT5G43270.3
- Gramene: AT5G43270.1, AT5G43270.2, AT5G43270.3
- KEGG: ath:AT5G43270
- Orthologous matrix: MEWEIDG
- ExpressionAtlas: AT5G43270
- InterPro: IPR004333, IPR036893, IPR044817
- PANTHER: PTHR31251, PTHR31251:SF74
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: A0A5S9YAG8
- SWISS-MODEL: A0A5S9YAG8
Sequences
cDNA Sequence
- >AT5G43270.2
TCGGTAATGAAATGAATCGTCCAAAAAAGTGGAAGCTGATGAAAGTAGTTTGACCCCTCCACATCTCCCAACTTGGTACTTAGCGTCGCACACACCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTCCTTTCTCTTTGTATCTCTTCTCTCTTATGCTAAGCCAAAAATGGAAGCTTTACTCTATTGAAGACGAGATCCTTCTCTAATTTACAGATTTTGGTGGTCAGTGTCTGATGGAGTGTAATGCAAAGCCACCGTTTCAATGGGAATTGGAAAACTTGATATCTTTTGGCACTTCTACAGCTGAAGTTCCTAGAAAGCTAAAACCAATGGAGTGGGAAATTGATGGATTTGATTGCACCTCTCTGTATTCTTCAAGCTTTGCCTATGCTGGTAGTTCAGGTTCTGATATAGCTCATGCTTTCTCTAAAAGCTCAAAGTCAACTTCCATTAGCTCTTCATCAGCTGAAGTAAGAACACACAATTTTACATCCGAAACTGGTGAAAGTCTTCCTGGAGAATTTGCAAAGGGGATTGATACTTCTCCAAGTCTTGAACTTTCTTTTGGCTCTGGTGATCCGGTTCTCGGTTTAAAGCTTGGTAAACGAACGTACTTTGAAGACTTTTGGGAAGTGGAGAATGCTAAAGGTTTGGGACTTCCAGTGACTCTGGCTTCATCTTCTGTTTCTCCCGTGAAGAAATCGAAATCCATTCCTCAGAGGTTACAAACTCCTCACTGTCAAGTTGAAGGCTGTAATCTTGATCTTTCATCAGCTAAAGACTATCATCGGAAACATAGGATTTGTGAAAATCATTCAAAGTTTCCTAAAGTCGTTGTGAGTGGCGTAGAGCGTCGGTTCTGCCAACAATGTAGCAGGTTCCACTGTCTCTCTGAGTTTGATGAGAAGAAACGTAGCTGTCGCCGACGTCTCTCAGATCACAATGCAAGACGTCGCAAGCCAAATCCTGGAAGGACATATGATGGGAAACCACAGGTGGATTTTGTATGGAACAGATTTGCACTTATCCATCCAAGAAGTGAGGAAAAGTTTATATGGCCAAGTTCGAAGCACGTACCATCAAGAGTGTTAATGCCGCAACCTGCAAAGACTGAGATTTCCGATACCGAGCACAATAGATTTGGATTGTTGGACCCCAAAACCAAAACCGCAAGAGCCGAGTTATTCAGTAAAGAAAAGGTCACAATCTCTTCACACATGGGTGCTTCTCAAGATCTTGATGGTGCTCTCTCTCTTCTGTCAAATTCAACAACATGGGTTTCTTCCTCTGACCAACCAAGGCGTTTTACCCTTGATCACCATCCCTCAAGCAACCTCCAACCCGTAGCTCACCGGTCTGCGGCTCAACTCAATTCAGTTTCCGGCTATTGGCAGCCGGACCCACCCGCAGTTGAAGGCCCGACCGCTCTGCATAGAAATGGGGTAGGCCAGTTTAATGAAAACTACTTCAGCTTGAACCAGTTTTATAACTGAAAATTGTATGCCTTTAAATCCTAATAAGATATTTGATGTTAAAGGATCAAGCAAGCTAGTGATAAGTTAAGATAGGAGCTTTGAAACTTGCAAGACACCAAATCCTCTCTTGTTTTTTTGTCCAAATATTTTCATGGGTTAGAGAGCTTTGACAATTGTCTTAATATCATCTTTGTCGTGTTATACATTAGGATTATAAATCTTGATGGTGTACTACGAAATTGATCAAACGCA - >AT5G43270.1
TCGGTAATGAAATGAATCGTCCAAAAAAGTGGAAGCTGATGAAAGTAGTTTGACCCCTCCACATCTCCCAACTTGGTACTTAGCGTCGCACACACCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTCCTTTCTCTTTGTATCTCTTCTCTCTTATGCTAAGCCAAAAATGGAAGCTTTACTCTATTGAAGACGAGATCCTTCTCTAATTTACAGATTTTGGTGGTCAGTGTCTGATGGAGTGTAATGCAAAGCCACCGTTTCAATGGGAATTGGAAAACTTGATATCTTTTGGCACTTCTACAGCTGAAGTTCCTAGAAAGCTAAAACCAATGGAGTGGGAAATTGATGGATTTGATTGCACCTCTCTGTATTCTTCAAGCTTTGCCTATGCTGGTAGTTCAGGTTCTGATATAGCTCATGCTTTCTCTAAAAGCTCAAAGTCAACTTCCATTAGCTCTTCATCAGCTGAAGTAAGAACACACAATTTTACATCCGAAACTGGTGAAAGTCTTCCTGGAGAATTTGCAAAGGGGATTGATACTTCTCCAAGTCTTGAACTTTCTTTTGGCTCTGGTGATCCGGTTCTCGGTTTAAAGCTTGGTAAACGAACGTACTTTGAAGACTTTTGGGAAGTGGAGAATGCTAAAGGTTTGGGACTTCCAGTGACTCTGGCTTCATCTTCTGTTTCTCCCGTGAAGAAATCGAAATCCATTCCTCAGAGGTTACAAACTCCTCACTGTCAAGTTGAAGGCTGTAATCTTGATCTTTCATCAGCTAAAGACTATCATCGGAAACATAGGATTTGTGAAAATCATTCAAAGTTTCCTAAAGTCGTTGTGAGTGGCGTAGAGCGTCGGTTCTGCCAACAATGTAGCAGGTTCCACTGTCTCTCTGAGTTTGATGAGAAGAAACGTAGCTGTCGCCGACGTCTCTCAGATCACAATGCAAGACGTCGCAAGCCAAATCCTGGAAGGACATATGATGGGAAACCACAGGTGGATTTTGTATGGAACAGATTTGCACTTATCCATCCAAGAAGTGAGGAAAAGTTTATATGGCCAAGTTCGAAGCACGTACCATCAAGAGTGTTAATGCCGCAACCTGCAAAGACTGAGATTTCCGATACCGAGCACAATAGATTTGGATTGTTGGACCCCAAAACCAAAACCGCAAGAGCCGAGTTATTCAGTAAAGAAAAGGTCACAATCTCTTCACACATGGGTGCTTCTCAAGATCTTGATGGTGCTCTCTCTCTTCTGTCAAATTCAACAACATGGGTTTCTTCCTCTGACCAACCAAGGCGTTTTACCCTTGATCACCATCCCTCAAGCAACCTCCAACCCGTAGCTCACCGGTCTGCGGCTCAACTCAATTCAGTTTCCGGCTATTGGCAGCCGGACCCACCCGCAGTTGAAGGCCCGACCGCTCTGCATAGAAATGGGGTAGGCCAGTTTAATGAAAACTACTTCAGCTTGAACCAGTTTTATAACTGAAAATTGTATGCCTTTAAATCCTAATAAGATATTTGATGTTAAAGGATCAAGCAAGCTAGTGATAAGTTAAGATAGGAGCTTTGAAACTTGCAAGACACCAAATCCTCTCTTGTTTTTTTGTCCAAATATTTTCATGGGTTAGAGAGCTTTGACAATTGTCTTAATATCATCTTTGTCGTGTTATACATTAGGATTATAAATCTTGATGGTGTACTACGAAATTGATCAAACGCA - >AT5G43270.3
TCGGTAATGAAATGAATCGTCCAAAAAAGTGGAAGCTGATGAAAGTAGTTTGACCCCTCCACATCTCCCAACTTGGTACTTAGCGTCGCACACACCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTCCTTTCTCTTTGTATCTCTTCTCTCTTATGCTAAGCCAAAAATGGAAGCTTTACTCTATTGAAGACGAGATCCTTCTCTAATTTACAGATTTTGGTGGTCAGTGTCTGATGGAGTGTAATGCAAAGCCACCGTTTCAATGGGAATTGGAAAACTTGATATCTTTTGGCACTTCTACAGCTGAAGTTCCTAGAAAGCTAAAACCAATGGAGTGGGAAATTGATGGATTTGATTGCACCTCTCTGTATTCTTCAAGCTTTGCCTATGCTGGTAGTTCAGGTTCTGATATAGCTCATGCTTTCTCTAAAAGCTCAAAGTCAACTTCCATTAGCTCTTCATCAGCTGAAGTAAGAACACACAATTTTACATCCGAAACTGGTGAAAGTCTTCCTGGAGAATTTGCAAAGGGGATTGATACTTCTCCAAGTCTTGAACTTTCTTTTGGCTCTGGTGATCCGGTTCTCGGTTTAAAGCTTGGTAAACGAACGTACTTTGAAGACTTTTGGGAAGTGGAGAATGCTAAAGGTTTGGGACTTCCAGTGACTCTGGCTTCATCTTCTGTTTCTCCCGTGAAGAAATCGAAATCCATTCCTCAGAGGTTACAAACTCCTCACTGTCAAGTTGAAGGCTGTAATCTTGATCTTTCATCAGCTAAAGACTATCATCGGAAACATAGGATTTGTGAAAATCATTCAAAGTTTCCTAAAGTCGTTGTGAGTGGCGTAGAGCGTCGGTTCTGCCAACAATGTAGCAGGTTCCACTGTCTCTCTGAGTTTGATGAGAAGAAACGTAGCTGTCGCCGACGTCTCTCAGATCACAATGCAAGACGTCGCAAGCCAAATCCTGGAAGGACATATGATGGGAAACCACAGGTGGATTTTGTATGGAACAGATTTGCACTTATCCATCCAAGAAGTGAGGAAAAGTTTATATGGCCAAGTTCGAAGCACGTACCATCAAGAGTGTTAATGCCGCAACCTGCAAAGACTGAGATTTCCGATACCGAGCACAATAGATTTGGATTGTTGGACCCCAAAACCAAAACCGCAAGAGCCGAGTTATTCAGTAAAGAAAAGGTCACAATCTCTTCACACATGGGTGCTTCTCAAGATCTTGATGGTGCTCTCTCTCTTCTGTCAAATTCAACAACATGGGTTTCTTCCTCTGACCAACCAAGGCGTTTTACCCTTGATCACCATCCCTCAAGCAACCTCCAACCCGTAGCTCACCGGTCTGCGGCTCAACTCAATTCAGTTTCCGGCTATTGGCAGCCGGACCCACCCGCAGTTGAAGGCCCGACCGCTCTGCATAGAAATGGGGTAGGCCAGTTTAATGAAAACTACTTCAGCTTGAACCAGTTTTATAACTGAAAATTGTATGCCTTTAAATCCTAATAAGATATTTGATGTTAAAGGATCAAGCAAGCTAGTGATAAGTTAAGATAGGAGCTTTGAAACTTGCAAGACACCAAATCCTCTCTTGTTTTTTTGTCCAAATATTTTCATGGGTTAGAGAGCTTTGACAATTGTCTTAATATCATCTTTGTCGTGTTATACATTAGGATTATAAATCTTGATGGTGTACTACGAAATTGATCAAACGCA
CDS Sequence
Protein Sequence