Information report for AT5G42940
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. DOI: 10.1038/s41598-022-14429-x ; PMID: 35787631
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
Sequences
cDNA Sequence
- >AT5G42940.1
AAAATCTTTACACATTGAATTATTAGTTTTTGTTTATTCGTTGATTTAGGCATTTAGCAATTCAATTCAGTCTTTGGAAACTGTTCTTATGACTGACCCTTTTTAACTTTTTGATTCAATTTCCTTAAAATATTAGTTTTTATTTTGGGTTATATGGTAAATTACACATTGCCGTCTCGTCCTAATAATCCTCTTTTCTGTTCCCATTTGTGTTGTTGTGCTTTGCTTCCTTCCTTTTTCCTCATTCTCTCTTCTTCTCCTTCTTCCTTCTCCTCCACCACAAAGCGGTAGGTTTCTCTCTTCAACAATCGTCTCCCCATTAGGCACATTGTTGAGGGCAGGGTAGTCTCGTGAGTTCTCTTCTCCTGAGTGTAACTGTGGTTAAAAGCTTAGCCAAGATGCAGGGGGAGAGGGCCAGTCTTGGCTATTTATCAGAGGCCTTGAACTTTGAGCATGGTTCTTCTTCAAGTAATGGTGTGATAGATCATTGGGAGAATATTCACAGTCTTGGTGATAATGACTTGCAGGATTACATGATTGCAAATTCTGAATCAAATACTTCGCTTGCAAACTCAGTTTATCACGAGCAACAGGGTTTACGCAGATTTAGCCTTGGTGAGGCTAGCTCTAGTGGCACGAAGGATGAAGCTTCCAGTCACAATGAGCAACGAATGGAAACAAGATGCTTTGACGGACGAGGAAATGAAATAATTGATTTAGACCCAGTGTTTGCGCAGCCATCAGGCACAAATCAACCTGTTCAGAATGTCAATCTGAATGCAGAGTATATAGAAATTCACGAGGATATTAATCCATATAGAGGTCGGTCTGGCTTCATAGAAGCTAATGGACCAGGGACCAGGGTCTCACAACCTGGCAGATCTTTTGAAGAGAACGGTGTTGGAACAGGTTCTTCTGTAGAGGGACGTCGTGCATCCTGCAAAAGAAAAGCTCTTGAAGGCAGTATTAGTCAATCTTCTTCAGGAGGTTATCATGATTTCCAGCGTGGAGAAAGCAGTTCGTGGACCCCAGGTTCTACGGTTTTTAGGCCAGGAAATGGTTTAAACATATCTGGCTCCCTTGACAATGGACCAAGAGGAATGGTCTCCGGTACTGTACCAAATTTTCCTGTTTCTGCACCAAATTTTCCTGTTTCTGCCATTGCAGAGAGCTCCAGTAGAAATATATGCGTCAGGAGTAATCCCTCAGATCATCAAGAAACTGTAAACCCATCTACCTTTGCTGCGGGAACTGTTGTCAGGCGGCCTGTCCCTCCATCCCAGTTGAACTTGTCAAGACACTTACCAGCAGATCAGCATTCATTGGACTTGAGACCTGGACAGTCTTTTGTCGTTTCTCGTAACCCAAATTCTACTCCTGTGAGCATACCACCTGGTTCAAGGACTATGCTACCACCATTTCGGTGGACTGGGAGCTCACTAGTGGGTGGAACATCGAACTCTACTGCGCCCGTTGAGAGAAATCTTCATCTAGATGAAACCAGGTCAAGAAGCATACCCGGGAATACTCTTGAGATTCCCATGTTTGCAGCTCCTGAGGTAGGAAATTTTGCCCGTAGTCAGAGTAGCAGAAATGTAACAAATGGAAACCTGAATAGTGCATCATCAGTGTCCAGGACAGGCTCAACAACAAGTGTTCCACCACCACCACCACCATCTTCTAATCTAGCGTGGACTTCTTACCAGAATTCACCACATTATCAAAGAAGAAGGACTGAAAGGTCTGAACTTGCACGTAGGTCCTTGCTTTCTTCCCTTGCAGCAGATGCTACAAACCAGAGATCTGGTGATCATCCAACACTTCGTTCGTTGGCCCCTCCTGCCTCTTCGGATGGGCTTGTGCTTCAGCCTGGTGGTGATAATAGTCAGATGCATAATCGGGCTTACTCGAGAGCAGGTCCGTTGTTTGATAGGCAAGGGGATAGTGTGGTTGGTATTCCTCATCCTTTGCGGGCCTTGGCAGCTGCAAGCAGAGGAAGAAGCAGACTTATGGTGTCCCAGATGCAGAATGTCTTGGATGTCATGCGTAGGGATGCTAATAATAACAACTTGCGGCTTGAGGACGTTATGCTTCTAAATCACTCAGTACTATTTGATGGGGCTACTGGTCATGACCGGTATAGAGACATGCGACTTGATGTGGACAACATGTCATATGAGGAATTGTTGGCACTAGAAGAGCGGATTGGAGATGTTTGTACCGGTGTAAACGAGGAAACCATATCAAACCGGTTAAAGCAACGAAAATACAAAAGCAACACAAAATCTCCACAAGATGCAGAGCCATGCTGTGTTTGTCAGGAGGAATACACCGAAGGAGAAGACATGGGGACACTAGAATGTGGGCATGAATTCCATAGCCAATGCATTAAAGAATGGCTGAAACAGAAGAATCTTTGCCCAATCTGCAAGACTACAGGCTTGAACACCGCGAAGAAGCGGAGGATAGCATGATGATTTCTCGAAAGAGCTTTTTTTTTTTCTTAACTATTCAATTTTATAATCAAAAATGAAAGAAACAGAAGGTACCCTCAAGCCCCCACACCATTGCAGAGCCAGGCAAGTTTGTCCCCAATTTTTTTTAAAAAAAAGATAGAATTTGTTCGTATTTATAATCTGAGTATGAAAGATGGAAAGATTTGGATTGAAGGGAAAAGATAAAGGGTGGTAGGGAAATGTTGTTTTTTTCTTTTATGGATTTGTTTGGATAATTTAATTTTACCCATTGTCAATTAAGTTTATGAATCCTTTGAAAGAAGCAGGAAGTTGAATCA - >AT5G42940.2
AAAATCTTTACACATTGAATTATTAGTTTTTGTTTATTCGTTGATTTAGGCATTTAGCAATTCAATTCAGTCTTTGGAAACTGTTCTTATGACTGACCCTTTTTAACTTTTTGATTCAATTTCCTTAAAATATTAGTTTTTATTTTGGGTTATATGGTAAATTACACATTGCCGTCTCGTCCTAATAATCCTCTTTTCTGTTCCCATTTGTGTTGTTGTGCTTTGCTTCCTTCCTTTTTCCTCATTCTCTCTTCTTCTCCTTCTTCCTTCTCCTCCACCACAAAGCGGTAGGTTTCTCTCTTCAACAATCGTCTCCCCATTAGGCACATTGTTGAGGGCAGGGTAGTCTCGTGAGTTCTCTTCTCCTGAGTGTAACTGTGGTTAAAAGCTTAGCCAAGATGCAGGGGGAGAGGGCCAGTCTTGGCTATTTATCAGAGGCCTTGAACTTTGAGCATGGTTCTTCTTCAAGTAATGGTGTGATAGATCATTGGGAGAATATTCACAGTCTTGGTGATAATGACTTGCAGGATTACATGATTGCAAATTCTGAATCAAATACTTCGCTTGCAAACTCAGTTTATCACGAGCAACAGGGTTTACGCAGATTTAGCCTTGGTGAGGCTAGCTCTAGTGGCACGAAGGATGAAGCTTCCAGTCACAATGAGCAACGAATGGAAACAAGATGCTTTGACGGACGAGGAAATGAAATAATTGATTTAGACCCAGTGTTTGCGCAGCCATCAGGCACAAATCAACCTGTTCAGAATGTCAATCTGAATGCAGAGTATATAGAAATTCACGAGGATATTAATCCATATAGAGGTCGGTCTGGCTTCATAGAAGCTAATGGACCAGGGACCAGGGTCTCACAACCTGGCAGATCTTTTGAAGAGAACGGTGTTGGAACAGGTTCTTCTGTAGAGGGACGTCGTGCATCCTGCAAAAGAAAAGCTCTTGAAGGCAGTATTAGTCAATCTTCTTCAGGAGGTTATCATGATTTCCAGCGTGGAGAAAGCAGTTCGTGGACCCCAGGTTCTACGGTTTTTAGGCCAGGAAATGGTTTAAACATATCTGGCTCCCTTGACAATGGACCAAGAGGAATGGTCTCCGGTACTGTACCAAATTTTCCTGTTTCTGCACCAAATTTTCCTGTTTCTGCCATTGCAGAGAGCTCCAGTAGAAATATATGCGTCAGGAGTAATCCCTCAGATCATCAAGAAACTGTAAACCCATCTACCTTTGCTGCGGGAACTGTTGTCAGGCGGCCTGTCCCTCCATCCCAGTTGAACTTGTCAAGACACTTACCAGCAGATCAGCATTCATTGGACTTGAGACCTGGACAGTCTTTTGTCGTTTCTCGTAACCCAAATTCTACTCCTGTGAGCATACCACCTGGTTCAAGGACTATGCTACCACCATTTCGGTGGACTGGGAGCTCACTAGTGGGTGGAACATCGAACTCTACTGCGCCCGTTGAGAGAAATCTTCATCTAGATGAAACCAGGTCAAGAAGCATACCCGGGAATACTCTTGAGATTCCCATGTTTGCAGCTCCTGAGGTAGGAAATTTTGCCCGTAGTCAGAGTAGCAGAAATGTAACAAATGGAAACCTGAATAGTGCATCATCAGTGTCCAGGACAGGCTCAACAACAAGTGTTCCACCACCACCACCACCATCTTCTAATCTAGCGTGGACTTCTTACCAGAATTCACCACATTATCAAAGAAGAAGGACTGAAAGGTCTGAACTTGCACGTAGGTCCTTGCTTTCTTCCCTTGCAGCAGATGCTACAAACCAGAGATCTGGTGATCATCCAACACTTCGTTCGTTGGCCCCTCCTGCCTCTTCGGATGGGCTTGTGCTTCAGCCTGGTGGTGATAATAGTCAGATGCATAATCGGGCTTACTCGAGAGCAGGTCCGTTGTTTGATAGGCAAGGGGATAGTGTGGTTGGTATTCCTCATCCTTTGCGGGCCTTGGCAGCTGCAAGCAGAGGAAGAAGCAGACTTATGGTGTCCCAGATGCAGAATGTCTTGGATGTCATGCGTAGGGATGCTAATAATAACAACTTGCGGCTTGAGGACGTTATGCTTCTAAATCACTCAGTACTATTTGATGGGGCTACTGGTCATGACCGGTATAGAGACATGCGACTTGATGTGGACAACATGTCATATGAGGAATTGTTGGCACTAGAAGAGCGGATTGGAGATGTTTGTACCGGTGTAAACGAGGAAACCATATCAAACCGGTTAAAGCAACGAAAATACAAAAGCAACACAAAATCTCCACAAGATGCAGAGCCATGCTGTGTTTGTCAGGAGGAATACACCGAAGGAGAAGACATGGGGACACTAGAATGTGGGCATGAATTCCATAGCCAATGCATTAAAGAATGGCTGAAACAGAAGAATCTTTGCCCAATCTGCAAGACTACAGGCTTGAACACCGCGAAGAAGCGGAGGATAGCATGATGATTTCTCGAAAGAGCTTTTTTTTTTTCTTAACTATTCAATTTTATAATCAAAAATGAAAGAAACAGAAGGTACCCTCAAGCCCCCACACCATTGCAGAGCCAGGCAAGTTTGTCCCCAATTTTTTTTAAAAAAAAGATAGAATTTGTTCGTATTTATAATCTGAGTATGAAAGATGGAAAGATTTGGATTGAAGGGAAAAGATAAAGGGTGGTAGGGAAATGTTGTTTTTTTCTTTTATGGATTTGTTTGGATAATTTAATTTTACCCATTGTCAATTAAGTTTATGAATCCTTTGAAAGAAGCAGGAAGTTGAATCA
CDS Sequence
Protein Sequence