Gene Details:
- Gene ID: AT5G42890
- Gene Symbol: ATSCP2, SCP2
- Gene Name: STEROL CARRIER PROTEIN 2, sterol carrier protein 2
- Description: sterol carrier protein 2;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000003 — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0005660 — hydathode — hidatodo (Spanish, exact), 排水組織 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009074 — style — estilo (Spanish, exact), 花柱 (Japanese, exact), Poaceae style (narrow)
- PO:0009089 — endosperm — albumen (exact), endosperma (Spanish, exact), 内胚乳、胚乳 (Japanese, exact)
- PO:0020006 — funicle — funículo (Spanish, exact), funiculi (exact, plural), 珠柄 (Japanese, exact), funiculus (related), Poaceae funicle (narrow), Zea funicle (narrow)
Function-related keywords:
- root , pollen , plant sperm cell , whole plant , trichome , hydathode , plant embryo , portion of vascular tissue , anther , style , endosperm , funicle
Literature:
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- Genome-wide identification of genes expressed in Arabidopsis pistils specifically along the path of pollen tube growth. DOI: 10.1104/pp.105.060558 ; PMID: 15894741
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Arabidopsis sterol carrier protein-2 is required for normal development of seeds and seedlings. DOI: 10.1093/jxb/ern201 ; PMID: 18687588
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT5G42890.1
AAACAGTAATCATGAGGTAAGAATAAGCAAATAGGGAAGCGTGCCAGTCTCTAACAAAAATCTCAATCTTTCCATACTTATCGATCACGTCACCTCCTTTGTCTCTATTACCTAACTCCATCCTTAAAAATCCAATCTTTCACCTTTCTTCTCCGAGATTTCACTACACTGCGCAATAAAAAAATGGCGAATACCCAACTCAAATCCGATGCAATCATGGACATGATGAAGGAACATCTTTCCACCGACGCCGGGAAAGAGGTCACAGAGAAGATCGGTCTTGTTTATCAGATCAACATTGCTCCAAAGAAATTAGGGTTTGAAGAGGTTACTTACATCGTTGATCTGAAGAAAGGCGAAGTCACCAAAGGGAAATATGAAGGAGGGAAAGTGGATGCTACGTTCTCCTTCAAGGATGATGATTTTGTCAAAGTTGCCACTGGAAAGATGAATCCTCAGATGGCTTTCATTAGGGGTGCGATGAAGATCAAGGGTAGTCTCAGTGCTGCGCAGAAATTCACCCCTGACATCTTCCCTAAACCTTCAAAGTTGTGAACACCAAAAAGAGTGGTATGCAGCAAACCCTAAACTCAAGCTCAATTTATGTCTTCAAAGGGGTTGGCTTTTTAGTACAACTAGTCAGAAATAAAGTTCTCTTCAAAGTATCTTTGTATTCTCTTTTATCTTTGGAACAAAAATATTGGTATTGGGTTTTAATAATATGAATCTTCTCTTTGAACATCTTACTGTTGGCAAGTGTGTATCAATTCATTACCTTTATTTCCTATGAGTGAAATTAACATAATCATACATTGTAAAATAATTGTCCAAACTTAAGGAGTC
CDS Sequence
Protein Sequence