Gene Details:

• Gene ID: AT5G42820
• Gene Symbol: AtC3H60, ATU2AF35B, U2AF35B
• Gene Name:
• Description: Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)
• TAIR Accession: locus:2165447
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G42820.1     AT5G42820.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000282  — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0020001  — plant ovary placenta — placenta de ovario (Spanish, exact), 子房胎座 (Japanese, exact), Poaceae ovary placenta (narrow), Zea ovary placenta (narrow)
• PO:0020006  — funicle — funículo (Spanish, exact), funiculi (exact, plural), 珠柄 (Japanese, exact), funiculus (related), Poaceae funicle (narrow), Zea funicle (narrow)
• PO:0020127  — primary root — raíz primaria (Spanish, exact), tap root (exact), 一次根 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0000398  — involved in — mRNA splicing, via spliceosome
• GO:0005681  — part of — spliceosomal complex
• GO:0089701  — part of — U2AF complex
• GO:0005634  — located in — nucleus
• GO:0005515  — enables — protein binding
• GO:0048573  — acts upstream of or within — photoperiodism, flowering
• GO:0017108  — enables — pre-mRNA 3-splice site binding

Function-related keywords:

• root ,  trichome ,  vascular leaf ,  stamen ,  flower ,  plant ovary placenta ,  funicle ,  primary root ,  plant sperm cell ,  guard cell

Literature:

• Molecular characterization and phylogeny of U2AF35 homologs in plants.   DOI:  10.1104/pp.105.073858 ;  PMID:  16407443
• Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.   DOI:  10.1186/1471-2164-9-44 ;  PMID:  18221561
• The C3H-type zinc finger protein GDS1/C3H42 is a nuclear-speckle-localized protein that is essential for normal growth and development in Arabidopsis.   DOI:  10.1016/j.plantsci.2016.06.010 ;  PMID:  27457991
• The Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms.   DOI:  10.1007/s00299-017-2142-z ;  PMID:  28432478
• AtU2AF65b functions in abscisic acid mediated flowering via regulating the precursor messenger RNA splicing of ABI5 and FLC in Arabidopsis.   DOI:  10.1111/nph.15756 ;  PMID:  30790290

Sequences: