AT5G42820

Gene Details

Gene ID: AT5G42820
Gene Symbol: AtC3H60, ATU2AF35B, U2AF35B
Gene Name:
Description: Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)
TAIR Accession: locus:2165447
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0020001 — plant ovary placenta — placenta de ovario (Spanish, exact), 子房胎座 (Japanese, exact), Poaceae ovary placenta (narrow), Zea ovary placenta (narrow)
PO:0020006 — funicle — funículo (Spanish, exact), funiculi (exact, plural), 珠柄 (Japanese, exact), funiculus (related), Poaceae funicle (narrow), Zea funicle (narrow)
PO:0020127 — primary root — raíz primaria (Spanish, exact), tap root (exact), 一次根 (Japanese, exact)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

GO:0000398 — involved in — mRNA splicing, via spliceosome
GO:0005681 — part of — spliceosomal complex
GO:0089701 — part of — U2AF complex
GO:0005634 — located in — nucleus
GO:0005515 — enables — protein binding
GO:0048573 — acts upstream of or within — photoperiodism, flowering
GO:0017108 — enables — pre-mRNA 3-splice site binding

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT5G42820.2
ACTCTCTCTCTCTCTCCGGCTCACACGAGTCGCTAATCAAATAAACCTAAACCCTAGATCGTGATCGGCAACGGCACCTCCTCGTCGGCGATAGCTTCTCTTCCACTAAAAGAAAATCCTCTTCGGTGAGAATGGCAGAGCATTTAGCTTCAATCTTTGGTACTGAAAAGGATAGAGTGAATTGTCCGTTTTACTTTAAGATTGGTGCTTGTCGTCACGGTGACCGGTGCTCACGGCTTCATAACCGTCCCACCATCTCGCCGACGCTTCTCCTCTCGAACATGTACCAGAGACCTGACATGATAACTCCAGGTGTGGATCCTCAGGGACAGCCGTTAGACCCGAGTAAGATCCAAGACCACTTTGAGGATTTCTACGAAGATATTTTCGAAGAACTCAACAAGTTTGGTGAAGTGGAGAGTCTCAATGTTTGTGACAATCTTGCTGATCATATGATTGGGAATGTGTATGTTCTGTTTAAGGAGGAGGATCACGCAGCTGCTGCGTTGCAGGCTTTGCAGGGGAGATTTTATTCCGGTCGTCCTATCATTGCTGATTTCTCTCCTGTGACGGATTTTAGGGAAGCTACTTGTAGGCAGTATGAAGAAAACAGCTGTAACCGTGGTGGGTACTGTAATTTCATGCATGTGAAGCAGATTTCGAGGGAGCTTAGGAGGAAATTGTTTGGGAGGTATCGTCGTTCATACCGTCGGGGAAGCAGAAGTCGAAGCAGGAGTATAAGCCCTCGACGTAAGAGAGAGCATTCGCGAGAGCGAGAGAGAGGGGACGTTAGGGACCGTGACCGGCATGGAAATGGGAAAAGGAGCAGTGATAGATCAGAGAGGCATGATCGGGATGGTGGTGGAAGGAGGAGACATGGAAGCCCGAAACGGAGCAGAAGCCCACGAAATGTGAGAGAAGGAAGCGAGGAAAGGAGGGCGAGAATTGAGCAATGGAACCGAGAACGTGATGAGGGAGTTTAAGGGTATCGTTTGGGCTGATTACTTCATAAAAATCGTATGCCGCCAAAGAGATCTCATGGTTGTGATTCAGTGGGAGAGGAGGGACGGTCCATGGGTCTGCCACCCCAAAGATACTATCTTTTGTGAGAGAGTGGGGAGACAGTATATCGGAAAACCGCTGACAAAATTTTCCATAGAAGGAGCAACAACAGTGGCTAAGCTCCACCATCTTTGTATGTACAAGCAATTCTGGCAAAACTTGACAGAGAGCATTCTGGAACAGTAAAATATCTCCAGGCAACGGCTCCATGCCGAGAGAAGACCAGGGAGAGAAAGAGATATAGAGTGAAGGAGATATAGTTCCAACAAATTTTAAGTTTAAGAAATGAACATTCATCTTTTAGGGCTTTCTTTATTATGTTCTACAACAACAGTAACCAAAAAAAAGAGAGCTAGTGGTATTGAGACGATACATGACTTAGCTGTGGGAAGGTTTTGAGTTGCCGATTTGTTCTGCCGTGTTTTCGGCTTTC
>AT5G42820.1
ACTCTCTCTCTCTCTCCGGCTCACACGAGTCGCTAATCAAATAAACCTAAACCCTAGATCGTGATCGGCAACGGCACCTCCTCGTCGGCGATAGCTTCTCTTCCACTAAAAGAAAATCCTCTTCGGTGAGAATGGCAGAGCATTTAGCTTCAATCTTTGGTACTGAAAAGGATAGAGTGAATTGTCCGTTTTACTTTAAGATTGGTGCTTGTCGTCACGGTGACCGGTGCTCACGGCTTCATAACCGTCCCACCATCTCGCCGACGCTTCTCCTCTCGAACATGTACCAGAGACCTGACATGATAACTCCAGGTGTGGATCCTCAGGGACAGCCGTTAGACCCGAGTAAGATCCAAGACCACTTTGAGGATTTCTACGAAGATATTTTCGAAGAACTCAACAAGTTTGGTGAAGTGGAGAGTCTCAATGTTTGTGACAATCTTGCTGATCATATGATTGGGAATGTGTATGTTCTGTTTAAGGAGGAGGATCACGCAGCTGCTGCGTTGCAGGCTTTGCAGGGGAGATTTTATTCCGGTCGTCCTATCATTGCTGATTTCTCTCCTGTGACGGATTTTAGGGAAGCTACTTGTAGGCAGTATGAAGAAAACAGCTGTAACCGTGGTGGGTACTGTAATTTCATGCATGTGAAGCAGATTTCGAGGGAGCTTAGGAGGAAATTGTTTGGGAGGTATCGTCGTTCATACCGTCGGGGAAGCAGAAGTCGAAGCAGGAGTATAAGCCCTCGACGTAAGAGAGAGCATTCGCGAGAGCGAGAGAGAGGGGACGTTAGGGACCGTGACCGGCATGGAAATGGGAAAAGGAGCAGTGATAGATCAGAGAGGCATGATCGGGATGGTGGTGGAAGGAGGAGACATGGAAGCCCGAAACGGAGCAGAAGCCCACGAAATGTGAGAGAAGGAAGCGAGGAAAGGAGGGCGAGAATTGAGCAATGGAACCGAGAACGTGATGAGGGAGTTTAAGGGTATCGTTTGGGCTGATTACTTCATAAAAATCGTATGCCGCCAAAGAGATCTCATGGTTGTGATTCAGTGGGAGAGGAGGGACGGTCCATGGGTCTGCCACCCCAAAGATACTATCTTTTGTGAGAGAGTGGGGAGACAGTATATCGGAAAACCGCTGACAAAATTTTCCATAGAAGGAGCAACAACAGTGGCTAAGCTCCACCATCTTTGTATGTACAAGCAATTCTGGCAAAACTTGACAGAGAGCATTCTGGAACAGTAAAATATCTCCAGGCAACGGCTCCATGCCGAGAGAAGACCAGGGAGAGAAAGAGATATAGAGTGAAGGAGATATAGTTCCAACAAATTTTAAGTTTAAGAAATGAACATTCATCTTTTAGGGCTTTCTTTATTATGTTCTACAACAACAGTAACCAAAAAAAAGAGAGCTAGTGGTATTGAGACGATACATGACTTAGCTGTGGGAAGGTTTTGAGTTGCCGATTTGTTCTGCCGTGTTTTCGGCTTTC

CDS Sequence

Protein Sequence