Information report for AT5G42800
Gene Details
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Functional Descriptions
- GO:0009718 — acts upstream of or within — anthocyanin-containing compound biosynthetic process
- GO:0009718 — involved in — anthocyanin-containing compound biosynthetic process
- GO:0045552 — enables — dihydrokaempferol 4-reductase activity
- GO:0047890 — enables — flavanone 4-reductase activity
- GO:0042406 — located in — extrinsic component of endoplasmic reticulum membrane
- GO:0005515 — enables — protein binding
Functional Keywords
Literature and News
- The BANYULS gene encodes a DFR-like protein and is a marker of early seed coat development. DOI: 10.1046/j.1365-313x.1999.00529.x ; PMID: 10504561
- Effects of ionizing radiation on a plant genome: analysis of two Arabidopsis transparent testa mutations. DOI: 10.1105/tpc.4.3.333 ; PMID: 1354004
- The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques. DOI: 10.1105/tpc.12.10.1863 ; PMID: 11041882
- Regulation of anthocyanin biosynthesis in UV-A-irradiated cell cultures of carrot and in organs of intact carrot plants. DOI: 10.1016/s0168-9452(01)00408-3 ; PMID: 11448762
- Cloning and molecular analysis of structural genes involved in flavonoid and stilbene biosynthesis in grape (Vitis vinifera L.). DOI: 10.1007/BF00029856 ; PMID: 8193299
- Molecular cloning and characterization of Rosa hybrida dihydroflavonol 4-reductase gene. DOI: 10.1093/oxfordjournals.pcp.a078844 ; PMID: 8528604
- Levels of active oxygen species are controlled by ascorbic acid and anthocyanin in Arabidopsis. DOI: 10.1021/jf026179+ ; PMID: 12720382
- Sucrose-specific induction of the anthocyanin biosynthetic pathway in Arabidopsis. DOI: 10.1104/pp.105.072579 ; PMID: 16384906
- MAX1, a regulator of the flavonoid pathway, controls vegetative axillary bud outgrowth in Arabidopsis. DOI: 10.1073/pnas.0509463102 ; PMID: 16387852
- Over-expression of a flower-specific transcription factor gene AtMYB24 causes aberrant anther development. DOI: 10.1007/s00299-006-0229-z ; PMID: 16972096
- BEN1, a gene encoding a dihydroflavonol 4-reductase (DFR)-like protein, regulates the levels of brassinosteroids in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03129.x ; PMID: 17521414
- AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03565.x ; PMID: 18532977
- Architectural phenotypes in the transparent testa mutants of Arabidopsis thaliana. DOI: 10.1093/jxb/ern323 ; PMID: 19129166
- Transparent Testa Glabra 1 (TTG1) and TTG1-like genes in Matthiola incana R. Br. and related Brassicaceae and mutation in the WD-40 motif. DOI: 10.1111/j.1438-8677.2008.00099.x ; PMID: 19228327
- The endogenous GL3, but not EGL3, gene is necessary for anthocyanin accumulation as induced by nitrogen depletion in Arabidopsis rosette stage leaves. DOI: 10.1007/s00425-009-0978-3 ; PMID: 19621239
- Molecular mechanism for jasmonate-induction of anthocyanin accumulation in Arabidopsis. DOI: 10.1093/jxb/erp223 ; PMID: 19596700
- Features of anthocyanin biosynthesis in pap1-D and wild-type Arabidopsis thaliana plants grown in different light intensity and culture media conditions. DOI: 10.1007/s00425-010-1142-9 ; PMID: 20309578
- Auxin and ethylene induce flavonol accumulation through distinct transcriptional networks. DOI: 10.1104/pp.111.172502 ; PMID: 21427279
- Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor. DOI: 10.1105/tpc.111.084525 ; PMID: 21487097
- Brassinosteroid enhances jasmonate-induced anthocyanin accumulation in Arabidopsis seedlings. DOI: 10.1111/j.1744-7909.2011.01042.x ; PMID: 21545406
- Characterization of the regulatory network of BoMYB2 in controlling anthocyanin biosynthesis in purple cauliflower. DOI: 10.1007/s00425-012-1665-3 ; PMID: 22644767
- Regulation of anthocyanin biosynthesis in Arabidopsis thaliana red pap1-D cells metabolically programmed by auxins. DOI: 10.1007/s00425-013-2011-0 ; PMID: 24370633
- Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed. DOI: 10.1111/nph.12620 ; PMID: 24299194
- A R2R3-MYB transcription factor, GmMYB12B2, affects the expression levels of flavonoid biosynthesis genes encoding key enzymes in transgenic Arabidopsis plants. DOI: 10.1016/j.gene.2013.09.015 ; PMID: 24060295
- The miR156-SPL9-DFR pathway coordinates the relationship between development and abiotic stress tolerance in plants. DOI: 10.1111/tpj.12712 ; PMID: 25345491
- Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis. DOI: 10.1016/j.bbrc.2014.10.059 ; PMID: 25450360
- AtROS1 overexpression provides evidence for epigenetic regulation of genes encoding enzymes of flavonoid biosynthesis and antioxidant pathways during salt stress in transgenic tobacco. DOI: 10.1093/jxb/erv304 ; PMID: 26116024
- Phytochrome-interacting factors PIF4 and PIF5 negatively regulate anthocyanin biosynthesis under red light in Arabidopsis seedlings. DOI: 10.1016/j.plantsci.2015.06.001 ; PMID: 26259175
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The Arabidopsis Transcription Factor ANAC032 Represses Anthocyanin Biosynthesis in Response to High Sucrose and Oxidative and Abiotic Stresses. DOI: 10.3389/fpls.2016.01548 ; PMID: 27790239
- Calmodulin-binding protein CBP60g functions as a negative regulator in Arabidopsis anthocyanin accumulation. DOI: 10.1371/journal.pone.0173129 ; PMID: 28253311
- GA-DELLA pathway is involved in regulation of nitrogen deficiency-induced anthocyanin accumulation. DOI: 10.1007/s00299-017-2102-7 ; PMID: 28275852
- Protective role of anthocyanins in plants under low nitrogen stress. DOI: 10.1016/j.bbrc.2018.03.087 ; PMID: 29548824
- The Peroxidative Cleavage of Kaempferol Contributes to the Biosynthesis of the Benzenoid Moiety of Ubiquinone in Plants. DOI: 10.1105/tpc.18.00688 ; PMID: 30429224
- Diversity of genetic lesions characterizes new Arabidopsis flavonoid pigment mutant alleles from T-DNA collections. DOI: 10.1016/j.plantsci.2019.110335 ; PMID: 31928687
- SPX4 interacts with both PHR1 and PAP1 to regulate critical steps in phosphorus-status-dependent anthocyanin biosynthesis. DOI: 10.1111/nph.17139 ; PMID: 33617039
- Fibrillin2 in chloroplast plastoglobules participates in photoprotection and jasmonate-induced senescence. DOI: 10.1093/plphys/kiac166 ; PMID: 35404409
- MYB3 plays an important role in lignin and anthocyanin biosynthesis under salt stress condition in Arabidopsis. DOI: 10.1007/s00299-022-02878-7 ; PMID: 35562569
- PHR1 positively regulates phosphate starvation-induced anthocyanin accumulation through direct upregulation of genes F3'H and LDOX in Arabidopsis. DOI: 10.1007/s00425-022-03952-w ; PMID: 35842503
- Effects of ionizing radiation on a plant genome: analysis of two Arabidopsis transparent testa mutations. DOI: 10.1105/tpc.4.3.333 ; PMID: 1354004
- Sucrose-specific induction of the anthocyanin biosynthetic pathway in Arabidopsis. DOI: 10.1104/pp.105.072579 ; PMID: 16384906
Gene Resources
- UniProt: B1GV15
- EMBL: AM887597, AM887599, AM887603
- AlphaFoldDB: B1GV15
- EnsemblPlants: AT5G42800.1
- Gramene: AT5G42800.1
- KEGG: ath:AT5G42800
- Orthologous matrix: NEAHYTI
- ExpressionAtlas: AT5G42800
- InterPro: IPR001509, IPR036291, IPR050425
- PANTHER: PTHR10366, PTHR10366:SF564
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- SWISS-MODEL: B1GV15
- Conserved Domain Database: cd08958
Sequences
cDNA Sequence
- >AT5G42800.1
GTTGGTACTCACGTGACCGGCAGCTTCTCGTTCTTATTATCTGTTTTCTTCAATAACGATTCATAATCTCTAGTGTCTTATTTATAATGTCTTCACATCACAAAGATTTGTACCGAACATACATAGTTGAATCTTTCCCAAAGCACAATCTATCATATAACCACAAAAATGGTTAGTCAGAAAGAGACCGTGTGTGTAACCGGCGCTTCGGGTTTCATCGGTTCATGGCTAGTGATGCGATTACTAGAACGTGGTTACTTTGTTCGTGCCACCGTTCGAGATCCCGGTAATTTGAAGAAAGTACAACATCTTCTTGATTTGCCAAACGCCAAGACGCTACTCACTTTATGGAAGGCTGATTTATCTGAGGAAGGAAGCTACGATGATGCCATAAACGGATGTGACGGTGTTTTCCACGTGGCAACACCCATGGATTTTGAATCAAAAGATCCTGAGAACGAAGTGATAAAGCCGACAGTGAATGGAATGTTGGGGATAATGAAAGCATGTGTTAAGGCAAAGACCGTACGAAGATTCGTATTTACTTCATCTGCCGGAACCGTTAATGTAGAAGAACATCAGAAGAATGTCTATGATGAAAATGATTGGAGTGATCTTGAGTTTATCATGTCCAAAAAGATGACAGGATGGATGTATTTCGTGTCAAAAACGTTAGCGGAGAAAGCAGCGTGGGATTTCGCCGAAGAGAAAGGATTAGATTTCATTAGTATTATTCCAACATTGGTGGTCGGTCCATTCATCACAACGTCTATGCCGCCTAGCCTTATCACCGCGCTCTCTCCTATCACTCGGAACGAGGCGCATTACTCGATCATAAGACAAGGACAGTATGTGCATTTGGACGACTTATGCAACGCTCATATCTTCTTATACGAACAAGCAGCCGCCAAGGGACGTTATATTTGTTCCTCTCATGATGCAACCATTCTTACTATCTCCAAATTTCTCAGGCCAAAATACCCCGAATATAACGTACCTTCAACGTTTGAAGGTGTTGATGAGAATCTAAAGAGCATTGAATTCAGTTCCAAGAAGCTGACGGACATGGGGTTTAACTTCAAGTATAGTCTCGAGGAAATGTTTATTGAATCTATTGAGACATGTCGTCAAAAGGGTTTTCTCCCGGTTTCATTATCGTACCAATCCATATCGGAGATCAAGACTAAGAATGAAAACATTGACGTCAAAACCGGAGATGGTTTAACCGATGGTATGAAGCCATGTAACAAGACAGAAACGGGGATAACCGGCGAGAGAACCGATGCTCCCATGCTAGCACAACAGATGTGTGCCTAGAAAATTCAACTGTTATATTATCATATCGTTTTACTATTGGAGGTGTGATTTGGGTTTATCATTATGTTAATCATAATTTATCATTGGCAAATGATATGAAATGATTTTGTATCGCGTGTGATTGTAACGGTATGAATTAACCTATTTACGTATTTAAAGAGTGCTGTCTTTGAATCGACCGAACTTTGCAAGTTATATTTGTT
CDS Sequence
Protein Sequence