Information report for AT5G42740
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0097367 — enables — carbohydrate derivative binding
- GO:1901135 — involved in — carbohydrate derivative metabolic process
- GO:0009790 — involved in — embryo development
- GO:0006096 — involved in — glycolytic process
- GO:0005737 — located in — cytoplasm
- GO:0009556 — involved in — microsporogenesis
- GO:0006094 — involved in — gluconeogenesis
- GO:0004347 — enables — glucose-6-phosphate isomerase activity
- GO:0005829 — is active in — cytosol
- GO:0048029 — enables — monosaccharide binding
- GO:0009536 — located in — plastid
- GO:0051156 — involved in — glucose 6-phosphate metabolic process
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- Subdivision and haplotype structure in natural populations of Arabidopsis lyrata. DOI: 10.1046/j.1365-294x.2003.01743.x ; PMID: 12694288
- Characterization of a radish introgression carrying the Ogura fertility restorer gene Rfo in rapeseed, using the Arabidopsis genome sequence and radish genetic mapping. DOI: 10.1007/s00122-003-1381-2 ; PMID: 12942173
- Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. DOI: 10.1002/rcm.1376 ; PMID: 15052571
- Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. DOI: 10.1002/pmic.200401282 ; PMID: 16254930
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Proteomic analysis of differentially expressed proteins in fungal elicitor-treated Arabidopsis cell cultures. DOI: 10.1093/jxb/erj149 ; PMID: 16547123
- Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana. DOI: 10.1186/gb-2008-9-8-r129 ; PMID: 18710526
- Proteomics of the response of Arabidopsis thaliana to infection with Alternaria brassicicola. DOI: 10.1016/j.jprot.2009.10.005 ; PMID: 19857612
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A1P8BG38
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BG38
- EnsemblPlants: AT5G42740.3
- Gramene: AT5G42740.3
- Orthologous matrix: DWYRQLW
- ExpressionAtlas: AT5G42740
- InterPro: IPR001672, IPR018189, IPR023096
- PANTHER: PTHR11469, PTHR11469:SF1
- SUPFAM: SSF53697
- PROSITE: PS00174, PS00765, PS51463
- Gene3D: 1.10.1390.10, 3.40.50.10490
- OrthoDB: A0A1P8BG38
- SWISS-MODEL: A0A1P8BG38
- Conserved Domain Database: cd05015, cd05016
Sequences
cDNA Sequence
- >AT5G42740.3
GGATTTTCTCTTTTCTTAGTTTGTCAATGGTGGTTTGTGTAGAGAAGTGATTTGGGATTGTTTTGGTAATTTGGCAGGGACATGTAGAAGATATTAAGAAGACTCATTTGCGTGATTTGATGAGTGATGCTAATAGATGCCAGTCCATGATGATGGAGTTTGATGGGTTGCTGTTGGATTATTCTCGACAGCGTGCAACTGTTGAGACAATGGACAAGCTTTTGAACTTGGCAAAGGCTTCTCAATTGACAGAGAAGATCAGCCGCATGTTCAATGGGGAGCATATTAACAGTACAGAGAACAGATCAGTTCTTCATGTTGCGCTCCGTGCTCCAAAGGATGCAGTTATCAAGGCTGATGGAATGAATGTGGTTCCAGAAGTGTGGAACGTTCTAGATAAGATCAAGGAATTTTCTGACAAAATTCGCTCTGGTTCATGGGTTGGAGCCACTGGCAAACCGCTGAAAGATGTCATTGCGATTGGTATTGGTGGTAGCTTCTTAGGTCCACTGTTTGTCCACACGGCTCTCCAAACAGATCCTGAAGCTCTAGAGTCTGCTAAAGGACGCCAGCTGCGATTTCTTGCAAATATTGATCCTGTTGATGTTGCTAGAAATATCAGTGGACTAAATCCAGAAACTACTCTAGTTGTGGTGGTCTCGAAAACGTTTACAACAGCTGAAACAATGCTTAACGCCAGAACATTGAGGGAATGGATAACAGCTGCTCTTGGGGCTTCAGCTGTTGCAAAACATATGGTTGCTGTCAGCACTAATCTTGCGTTAGTAGAGAAGTTTGGTATTGACCCGAACAATGCATTTGCATTTTGGGACTGGGTTGGTGGAAGGTACAGTGTTTGCAGTGCGGTTGGAGTCTTACCTTTGTCTCTGCAGTATGGCTTCTCCATGGTTGAGAAGTTTTTGAAGGGAGCTTCAAGCATTGATCAGCATTTCCAGTCCACACCGTTCGAGAAGAATATACCTGTGCTTTTAGGGTTGTTGAGTGTATGGAATGTATCATTTCTTGGATATCCTGCTAGGGCCATCTTACCTTATTCGCAAGCCCTTGAGAAATTTGCTCCACACATTCAACAGGTTAGTATGGAGAGTAATGGAAAGGGAGTCTCAATTGATGGTCTACCTCTCCCGTTCGAGACTGGTGAGATTGATTTTGGTGAACCTGGAACAAATGGTCAACACAGCTTTTACCAACTCATTCACCAGGGACGCGTAATCCCTTGTGATTTCATTGGCATTGTGAAGAGTCAGCAACCTGTGTACCTTAAGGGAGAGGTGGTCAGTAACCACGACGAGCTCATGTCAAACTTTTTTGCACAGCCTGATGCTCTTGCATATGGAAAAACTCCTGAACAGCTGCAGAAAGAGAATGTTTCAGAAAATCTCATTCCCCATAAGACATTCTCTGGAAATCGACCTTCTCTTAGCCTTCTACTTCCAGAATTGACTGCTTACAATGTTGGCCAGTTGTTGGCTATCTATGAACACAGAGTAGCAGTTCAAGGCTTTGTGTGGGGTATCAATTCGTTTGACCAGTGGGGCGTTGAGCTAGGAAAAGTTCTGGCTACTCAGGTCAGGAAACAGCTTCATTCATCACGCACTCAAGGAACCGCTCCCGAGGGATTCAATTACAGTACCACCACACTTTTGAAACGATATCTCGAGACAAGTTCCGAGCCCCAGATGTGATGACCAAGCCCAAGTTTCTCTCCTTCGACCAAACGTGAACCATTTGAGCATTTTTCACCCTTGTTCTTCTTTTTTTCACTGTCCCTGATCAGAGTATACTTTATCGGCACTCATAAATTATCTAAAAATGGGTACTAATAATCCAAACCCCATAAAATCAGAATTGGGAGCATAATATCAGAGGAGCTTTTTTTCTCTAAATTATATGCACATAAAATGATTTAAGAATAGTCGGCAGCCTTTTCGTATCCGAAAATCAACGTCGAGTGACTATGTACTTCGATCGAGTGTTTTGATGCTTAACGTGTACGATCAAAAACTTAACATCCTTAAAAGAACGCACGACTTAGGATACTTTCTCTTATTGCTCATCAGAATTTCATAAACCATAGAAACAGCATTTTTCAAGCTTGCATGGCAATCCGGTTATTCCGAAAGATATTGTATCTGATTAATGATTATATACGTAACTATTCACTTTAGATTTTGTAGAATAGCATTCATGTACCTCTGTTTACGGTTATTGTATATAACATACCTCTTAAAACAAA - >AT5G42740.2
GGATTTTCTCTTTTCTTAGTTTGTCAATGGTGGTTTGTGTAGAGAAGTGATTTGGGATTGTTTTGGTAATTTGGCAGGGACATGTAGAAGATATTAAGAAGACTCATTTGCGTGATTTGATGAGTGATGCTAATAGATGCCAGTCCATGATGATGGAGTTTGATGGGTTGCTGTTGGATTATTCTCGACAGCGTGCAACTGTTGAGACAATGGACAAGCTTTTGAACTTGGCAAAGGCTTCTCAATTGACAGAGAAGATCAGCCGCATGTTCAATGGGGAGCATATTAACAGTACAGAGAACAGATCAGTTCTTCATGTTGCGCTCCGTGCTCCAAAGGATGCAGTTATCAAGGCTGATGGAATGAATGTGGTTCCAGAAGTGTGGAACGTTCTAGATAAGATCAAGGAATTTTCTGACAAAATTCGCTCTGGTTCATGGGTTGGAGCCACTGGCAAACCGCTGAAAGATGTCATTGCGATTGGTATTGGTGGTAGCTTCTTAGGTCCACTGTTTGTCCACACGGCTCTCCAAACAGATCCTGAAGCTCTAGAGTCTGCTAAAGGACGCCAGCTGCGATTTCTTGCAAATATTGATCCTGTTGATGTTGCTAGAAATATCAGTGGACTAAATCCAGAAACTACTCTAGTTGTGGTGGTCTCGAAAACGTTTACAACAGCTGAAACAATGCTTAACGCCAGAACATTGAGGGAATGGATAACAGCTGCTCTTGGGGCTTCAGCTGTTGCAAAACATATGGTTGCTGTCAGCACTAATCTTGCGTTAGTAGAGAAGTTTGGTATTGACCCGAACAATGCATTTGCATTTTGGGACTGGGTTGGTGGAAGGTACAGTGTTTGCAGTGCGGTTGGAGTCTTACCTTTGTCTCTGCAGTATGGCTTCTCCATGGTTGAGAAGTTTTTGAAGGGAGCTTCAAGCATTGATCAGCATTTCCAGTCCACACCGTTCGAGAAGAATATACCTGTGCTTTTAGGGTTGTTGAGTGTATGGAATGTATCATTTCTTGGATATCCTGCTAGGGCCATCTTACCTTATTCGCAAGCCCTTGAGAAATTTGCTCCACACATTCAACAGGTTAGTATGGAGAGTAATGGAAAGGGAGTCTCAATTGATGGTCTACCTCTCCCGTTCGAGACTGGTGAGATTGATTTTGGTGAACCTGGAACAAATGGTCAACACAGCTTTTACCAACTCATTCACCAGGGACGCGTAATCCCTTGTGATTTCATTGGCATTGTGAAGAGTCAGCAACCTGTGTACCTTAAGGGAGAGGTGGTCAGTAACCACGACGAGCTCATGTCAAACTTTTTTGCACAGCCTGATGCTCTTGCATATGGAAAAACTCCTGAACAGCTGCAGAAAGAGAATGTTTCAGAAAATCTCATTCCCCATAAGACATTCTCTGGAAATCGACCTTCTCTTAGCCTTCTACTTCCAGAATTGACTGCTTACAATGTTGGCCAGTTGTTGGCTATCTATGAACACAGAGTAGCAGTTCAAGGCTTTGTGTGGGGTATCAATTCGTTTGACCAGTGGGGCGTTGAGCTAGGAAAAGTTCTGGCTACTCAGGTCAGGAAACAGCTTCATTCATCACGCACTCAAGGAACCGCTCCCGAGGGATTCAATTACAGTACCACCACACTTTTGAAACGATATCTCGAGACAAGTTCCGAGCCCCAGATGTGATGACCAAGCCCAAGTTTCTCTCCTTCGACCAAACGTGAACCATTTGAGCATTTTTCACCCTTGTTCTTCTTTTTTTCACTGTCCCTGATCAGAGTATACTTTATCGGCACTCATAAATTATCTAAAAATGGGTACTAATAATCCAAACCCCATAAAATCAGAATTGGGAGCATAATATCAGAGGAGCTTTTTTTCTCTAAATTATATGCACATAAAATGATTTAAGAATAGTCGGCAGCCTTTTCGTATCCGAAAATCAACGTCGAGTGACTATGTACTTCGATCGAGTGTTTTGATGCTTAACGTGTACGATCAAAAACTTAACATCCTTAAAAGAACGCACGACTTAGGATACTTTCTCTTATTGCTCATCAGAATTTCATAAACCATAGAAACAGCATTTTTCAAGCTTGCATGGCAATCCGGTTATTCCGAAAGATATTGTATCTGATTAATGATTATATACGTAACTATTCACTTTAGATTTTGTAGAATAGCATTCATGTACCTCTGTTTACGGTTATTGTATATAACATACCTCTTAAAACAAA - >AT5G42740.1
GGATTTTCTCTTTTCTTAGTTTGTCAATGGTGGTTTGTGTAGAGAAGTGATTTGGGATTGTTTTGGTAATTTGGCAGGGACATGTAGAAGATATTAAGAAGACTCATTTGCGTGATTTGATGAGTGATGCTAATAGATGCCAGTCCATGATGATGGAGTTTGATGGGTTGCTGTTGGATTATTCTCGACAGCGTGCAACTGTTGAGACAATGGACAAGCTTTTGAACTTGGCAAAGGCTTCTCAATTGACAGAGAAGATCAGCCGCATGTTCAATGGGGAGCATATTAACAGTACAGAGAACAGATCAGTTCTTCATGTTGCGCTCCGTGCTCCAAAGGATGCAGTTATCAAGGCTGATGGAATGAATGTGGTTCCAGAAGTGTGGAACGTTCTAGATAAGATCAAGGAATTTTCTGACAAAATTCGCTCTGGTTCATGGGTTGGAGCCACTGGCAAACCGCTGAAAGATGTCATTGCGATTGGTATTGGTGGTAGCTTCTTAGGTCCACTGTTTGTCCACACGGCTCTCCAAACAGATCCTGAAGCTCTAGAGTCTGCTAAAGGACGCCAGCTGCGATTTCTTGCAAATATTGATCCTGTTGATGTTGCTAGAAATATCAGTGGACTAAATCCAGAAACTACTCTAGTTGTGGTGGTCTCGAAAACGTTTACAACAGCTGAAACAATGCTTAACGCCAGAACATTGAGGGAATGGATAACAGCTGCTCTTGGGGCTTCAGCTGTTGCAAAACATATGGTTGCTGTCAGCACTAATCTTGCGTTAGTAGAGAAGTTTGGTATTGACCCGAACAATGCATTTGCATTTTGGGACTGGGTTGGTGGAAGGTACAGTGTTTGCAGTGCGGTTGGAGTCTTACCTTTGTCTCTGCAGTATGGCTTCTCCATGGTTGAGAAGTTTTTGAAGGGAGCTTCAAGCATTGATCAGCATTTCCAGTCCACACCGTTCGAGAAGAATATACCTGTGCTTTTAGGGTTGTTGAGTGTATGGAATGTATCATTTCTTGGATATCCTGCTAGGGCCATCTTACCTTATTCGCAAGCCCTTGAGAAATTTGCTCCACACATTCAACAGGTTAGTATGGAGAGTAATGGAAAGGGAGTCTCAATTGATGGTCTACCTCTCCCGTTCGAGACTGGTGAGATTGATTTTGGTGAACCTGGAACAAATGGTCAACACAGCTTTTACCAACTCATTCACCAGGGACGCGTAATCCCTTGTGATTTCATTGGCATTGTGAAGAGTCAGCAACCTGTGTACCTTAAGGGAGAGGTGGTCAGTAACCACGACGAGCTCATGTCAAACTTTTTTGCACAGCCTGATGCTCTTGCATATGGAAAAACTCCTGAACAGCTGCAGAAAGAGAATGTTTCAGAAAATCTCATTCCCCATAAGACATTCTCTGGAAATCGACCTTCTCTTAGCCTTCTACTTCCAGAATTGACTGCTTACAATGTTGGCCAGTTGTTGGCTATCTATGAACACAGAGTAGCAGTTCAAGGCTTTGTGTGGGGTATCAATTCGTTTGACCAGTGGGGCGTTGAGCTAGGAAAAGTTCTGGCTACTCAGGTCAGGAAACAGCTTCATTCATCACGCACTCAAGGAACCGCTCCCGAGGGATTCAATTACAGTACCACCACACTTTTGAAACGATATCTCGAGACAAGTTCCGAGCCCCAGATGTGATGACCAAGCCCAAGTTTCTCTCCTTCGACCAAACGTGAACCATTTGAGCATTTTTCACCCTTGTTCTTCTTTTTTTCACTGTCCCTGATCAGAGTATACTTTATCGGCACTCATAAATTATCTAAAAATGGGTACTAATAATCCAAACCCCATAAAATCAGAATTGGGAGCATAATATCAGAGGAGCTTTTTTTCTCTAAATTATATGCACATAAAATGATTTAAGAATAGTCGGCAGCCTTTTCGTATCCGAAAATCAACGTCGAGTGACTATGTACTTCGATCGAGTGTTTTGATGCTTAACGTGTACGATCAAAAACTTAACATCCTTAAAAGAACGCACGACTTAGGATACTTTCTCTTATTGCTCATCAGAATTTCATAAACCATAGAAACAGCATTTTTCAAGCTTGCATGGCAATCCGGTTATTCCGAAAGATATTGTATCTGATTAATGATTATATACGTAACTATTCACTTTAGATTTTGTAGAATAGCATTCATGTACCTCTGTTTACGGTTATTGTATATAACATACCTCTTAAAACAAA
CDS Sequence
Protein Sequence