Information report for AT5G42480
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
Functional Keywords
Literature and News
- The distinctive roles of five different ARC genes in the chloroplast division process in Arabidopsis. DOI: 10.1046/j.1365-313x.1999.00500.x ; PMID: 10417716
- Reduced gravitropism in inflorescence stems and hypocotyls, but not roots, of Arabidopsis mutants with large plastids. DOI: 10.1034/j.1399-3054.2002.1140417.x ; PMID: 11975738
- Cell and plastid division are coordinated through the prereplication factor AtCDT1. DOI: 10.1073/pnas.0502564102 ; PMID: 15928083
- Plastid division is mediated by combinatorial assembly of plastid division proteins. DOI: 10.1111/j.1365-313X.2005.02493.x ; PMID: 16146521
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Arabidopsis ARC6 coordinates the division machineries of the inner and outer chloroplast membranes through interaction with PDV2 in the intermembrane space. DOI: 10.1105/tpc.108.061440 ; PMID: 18812496
- Plastid chaperonin proteins Cpn60 alpha and Cpn60 beta are required for plastid division in Arabidopsis thaliana. DOI: 10.1186/1471-2229-9-38 ; PMID: 19344532
- Photosynthesis in Arabidopsis thaliana mutants with reduced chloroplast number. DOI: 10.1007/s11120-005-7708-x ; PMID: 16170638
- In vivo quantitative relationship between plastid division proteins FtsZ1 and FtsZ2 and identification of ARC6 and ARC3 in a native FtsZ complex. DOI: 10.1042/BJ20071354 ; PMID: 18284374
- Arabidopsis FtsZ2-1 and FtsZ2-2 are functionally redundant, but FtsZ-based plastid division is not essential for chloroplast partitioning or plant growth and development. DOI: 10.1093/mp/ssp077 ; PMID: 19995726
- Arabidopsis β-ketoacyl-[acyl carrier protein] synthase i is crucial for fatty acid synthesis and plays a role in chloroplast division and embryo development. DOI: 10.1105/tpc.110.075564 ; PMID: 21081696
- A J-like protein influences fatty acid composition of chloroplast lipids in Arabidopsis. DOI: 10.1371/journal.pone.0025368 ; PMID: 22028775
- Gibberellin indirectly promotes chloroplast biogenesis as a means to maintain the chloroplast population of expanded cells. DOI: 10.1111/j.1365-313X.2012.05118.x ; PMID: 23020316
- Roles of Arabidopsis PARC6 in Coordination of the Chloroplast Division Complex and Negative Regulation of FtsZ Assembly. DOI: 10.1104/pp.15.01460 ; PMID: 26527658
- PDV2 has a dosage effect on chloroplast division in Arabidopsis. DOI: 10.1007/s00299-016-2096-6 ; PMID: 27988788
- ARC6-mediated Z ring-like structure formation of prokaryote-descended chloroplast FtsZ in Escherichia coli. DOI: 10.1038/s41598-017-03698-6 ; PMID: 28615720
- The Arabidopsis arc5 and arc6 mutations differentially affect plastid morphology in pavement and guard cells in the leaf epidermis. DOI: 10.1371/journal.pone.0192380 ; PMID: 29466386
- MCD1 Associates with FtsZ Filaments via the Membrane-Tethering Protein ARC6 to Guide Chloroplast Division. DOI: 10.1105/tpc.18.00189 ; PMID: 29967285
- Moonlighting proteins: putting the spotlight on enzymes. DOI: 10.1080/15592324.2018.1517075 ; PMID: 30252596
- Arabidopsis PARC6 Is Critical for Plastid Morphogenesis in Pavement, Trichome, and Guard Cells in Leaf Epidermis. DOI: 10.3389/fpls.2019.01665 ; PMID: 32010156
- OR(His), a Natural Variant of OR, Specifically Interacts with Plastid Division Factor ARC3 to Regulate Chromoplast Number and Carotenoid Accumulation. DOI: 10.1016/j.molp.2020.03.007 ; PMID: 32222485
- FATTY ACID DESATURASE5 Is Required to Induce Autoimmune Responses in Gigantic Chloroplast Mutants of Arabidopsis. DOI: 10.1105/tpc.20.00016 ; PMID: 32796124
- Residue 49 of AtMinD1 Plays a Key Role in the Guidance of Chloroplast Division by Regulating the ARC6-AtMinD1 Interaction. DOI: 10.3389/fpls.2021.752790 ; PMID: 34880885
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A1P8BCR9
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BCR9
- EnsemblPlants: AT5G42480.2
- Gramene: AT5G42480.2
- ExpressionAtlas: AT5G42480
- InterPro: IPR036869, IPR044685
- PANTHER: PTHR33925, PTHR33925:SF1
- SUPFAM: SSF46565
- SWISS-MODEL: A0A1P8BCR9
Sequences
cDNA Sequence
- >AT5G42480.1
TTAGACGATTTAACATCATAAAGTCCGTGGCGACTGTAACATCATAGATTGTTTTTTATTTTTTTCAGTAGCTGGTGATGTTTTTTGATTTAACTTATACTACTCAAAATCAAAATTCCATAAACCCTAGACGACCAAACAGTCTCTTCAATATGTAAAACAGAACAAAGTTTTTGTAGTAGCCTAAAAAGACACTCCCATGGAAGCTCTGAGTCACGTCGGCATTGGTCTCTCCCCATTCCAATTATGCCGATTACCACCGGCGACGACAAAGCTCCGACGTAGCCACAACACCTCTACAACTATCTGCTCCGCCAGCAAATGGGCCGACCGTCTTCTCTCCGACTTCAATTTCACCTCCGATTCCTCCTCCTCCTCCTTCGCCACCGCCACCACCACCGCCACTCTCGTCTCTCCGCCACCATCTATTGATCGTCCCGAACGCCACGTCCCCATCCCCATTGATTTCTACCAGGTATTAGGAGCTCAAACACATTTCTTAACCGATGGAATCAGAAGAGCATTCGAAGCTAGGGTTTCGAAACCGCCGCAATTCGGTTTCAGCGACGACGCTTTAATCAGCCGGAGACAGATTCTTCAAGCTGCTTGCGAAACTCTGTCTAATCCTCGGTCTAGAAGAGAGTACAATGAAGGTCTTCTTGATGATGAAGAAGCTACAGTCATCACTGATGTTCCTTGGGATAAGGTTCCTGGTGCTCTCTGTGTATTGCAAGAAGGTGGTGAGACTGAGATAGTTCTTCGGGTTGGTGAGGCTCTGCTTAAGGAGAGGTTGCCTAAGTCGTTTAAGCAAGATGTGGTTTTAGTTATGGCGCTTGCGTTTCTCGATGTCTCGAGGGATGCTATGGCATTGGATCCACCTGATTTTATAACTGGTTATGAGTTTGTTGAGGAAGCTTTGAAGCTTTTACAGGAGGAAGGAGCAAGTAGCCTTGCACCGGATTTACGTGCACAAATTGATGAGACTTTGGAAGAGATCACTCCGCGTTATGTCTTGGAGCTACTTGGCTTACCGCTTGGTGATGATTACGCTGCGAAAAGACTAAATGGTTTAAGCGGTGTGCGGAATATTTTGTGGTCTGTTGGAGGAGGTGGAGCATCAGCTCTTGTTGGGGGTTTGACCCGTGAGAAGTTTATGAATGAGGCGTTTTTACGAATGACAGCTGCTGAGCAGGTTGATCTTTTTGTAGCTACCCCAAGCAATATTCCAGCAGAGTCATTTGAAGTTTACGAAGTTGCACTTGCTCTTGTGGCTCAAGCTTTTATTGGTAAGAAGCCACACCTTTTACAGGATGCTGATAAGCAATTCCAGCAACTTCAGCAGGCTAAGGTAATGGCTATGGAGATTCCTGCGATGTTGTATGATACACGGAATAATTGGGAGATAGACTTCGGTCTAGAAAGGGGACTCTGTGCACTGCTTATAGGCAAAGTTGATGAATGCCGTATGTGGTTGGGCTTAGACAGTGAGGATTCACAATATAGGAATCCAGCTATTGTGGAGTTTGTTTTGGAGAATTCAAATCGTGATGACAATGATGATCTCCCTGGACTATGCAAATTGTTGGAAACCTGGTTGGCAGGGGTTGTCTTTCCTAGGTTCAGAGACACCAAAGATAAAAAATTTAAACTCGGGGACTACTATGATGATCCTATGGTTTTGAGTTACTTGGAAAGAGTGGAGGTAGTTCAGGGTTCTCCTTTAGCTGCTGCTGCAGCTATGGCAAGGATTGGAGCCGAGCATGTGAAAGCTAGTGCTATGCAGGCACTGCAGAAAGTTTTTCCTTCCCGCTATACAGATAGAAACTCGGCTGAACCCAAGGATGTGCAAGAGACAGTGTTTAGTGTAGATCCTGTTGGTAACAATGTAGGCCGTGATGGTGAGCCTGGTGTCTTTATTGCAGAAGCTGTAAGACCCTCTGAAAACTTTGAAACTAATGATTATGCAATTCGAGCTGGGGTCTCAGAGAGTAGCGTTGATGAAACTACTGTTGAAATGTCCGTTGCTGATATGTTAAAGGAGGCAAGTGTGAAGATCCTAGCTGCTGGTGTGGCAATTGGACTGATTTCACTGTTCAGCCAGAAGTATTTTCTTAAAAGCAGCTCATCTTTTCAACGCAAGGATATGGTTTCTTCTATGGAATCTGATGTCGCTACCATAGGGTCAGTCAGAGCTGACGATTCAGAAGCACTTCCCAGAATGGATGCTAGGACTGCAGAGAATATAGTATCCAAGTGGCAGAAGATTAAGTCTCTGGCTTTTGGGCCTGATCACCGCATAGAAATGTTACCAGAGGTTTTGGATGGGCGAATGCTGAAGATTTGGACTGACAGAGCAGCTGAAACTGCGCAGCTTGGGTTGGTTTATGATTATACACTGTTGAAACTATCTGTTGACAGTGTGACAGTCTCAGCAGATGGAACCCGTGCTCTGGTGGAAGCAACTCTGGAGGAGTCTGCTTGTCTATCTGATTTGGTTCATCCAGAAAACAATGCTACTGATGTCAGAACCTACACAACAAGATACGAAGTTTTCTGGTCCAAGTCAGGGTGGAAAATCACTGAAGGCTCTGTTCTTGCATCATAATATACTCATATGTAGCATGTCTGAGCTTGCGAGATTCTCTTTGTTTTGTAAATTCTCTCTCTAAGTTAGTGTTTATAAATGAACACAAAAAAATTAACGTTCTTGGCACACCCTTTTCCTTGATCTAAACTATAACATAAGGGCTACAATTTTGGATTCTTTCGCAATCAGGTACAAGCAGAACTTGACTTATCTTACATTCAAGCCTTTCACAACTTAACTATCAGTGTTTGGAGACTTCTGTCTTGTTTATGTTTTATAATTGTGCTCTGGTTATCATCTGGTCAAGCGTATAGCAGAGAATGATTTGGTAAATCTCCAGCCAGATGATTTTACGTTTTCGGTTCTAGGTAACAAGCTGAGGCCAAACATTTCCTTCGGCATTCGACTTGGCTCAACAAATCCAAGCAGCTTAGCCACAAGAGAAGCACTTTCTTTTATGTGGTCCATATCTTGGGTGTTGG - >AT5G42480.2
TTAGACGATTTAACATCATAAAGTCCGTGGCGACTGTAACATCATAGATTGTTTTTTATTTTTTTCAGTAGCTGGTGATGTTTTTTGATTTAACTTATACTACTCAAAATCAAAATTCCATAAACCCTAGACGACCAAACAGTCTCTTCAATATGTAAAACAGAACAAAGTTTTTGTAGTAGCCTAAAAAGACACTCCCATGGAAGCTCTGAGTCACGTCGGCATTGGTCTCTCCCCATTCCAATTATGCCGATTACCACCGGCGACGACAAAGCTCCGACGTAGCCACAACACCTCTACAACTATCTGCTCCGCCAGCAAATGGGCCGACCGTCTTCTCTCCGACTTCAATTTCACCTCCGATTCCTCCTCCTCCTCCTTCGCCACCGCCACCACCACCGCCACTCTCGTCTCTCCGCCACCATCTATTGATCGTCCCGAACGCCACGTCCCCATCCCCATTGATTTCTACCAGGTATTAGGAGCTCAAACACATTTCTTAACCGATGGAATCAGAAGAGCATTCGAAGCTAGGGTTTCGAAACCGCCGCAATTCGGTTTCAGCGACGACGCTTTAATCAGCCGGAGACAGATTCTTCAAGCTGCTTGCGAAACTCTGTCTAATCCTCGGTCTAGAAGAGAGTACAATGAAGGTCTTCTTGATGATGAAGAAGCTACAGTCATCACTGATGTTCCTTGGGATAAGGTTCCTGGTGCTCTCTGTGTATTGCAAGAAGGTGGTGAGACTGAGATAGTTCTTCGGGTTGGTGAGGCTCTGCTTAAGGAGAGGTTGCCTAAGTCGTTTAAGCAAGATGTGGTTTTAGTTATGGCGCTTGCGTTTCTCGATGTCTCGAGGGATGCTATGGCATTGGATCCACCTGATTTTATAACTGGTTATGAGTTTGTTGAGGAAGCTTTGAAGCTTTTACAGGAGGAAGGAGCAAGTAGCCTTGCACCGGATTTACGTGCACAAATTGATGAGACTTTGGAAGAGATCACTCCGCGTTATGTCTTGGAGCTACTTGGCTTACCGCTTGGTGATGATTACGCTGCGAAAAGACTAAATGGTTTAAGCGGTGTGCGGAATATTTTGTGGTCTGTTGGAGGAGGTGGAGCATCAGCTCTTGTTGGGGGTTTGACCCGTGAGAAGTTTATGAATGAGGCGTTTTTACGAATGACAGCTGCTGAGCAGGTTGATCTTTTTGTAGCTACCCCAAGCAATATTCCAGCAGAGTCATTTGAAGTTTACGAAGTTGCACTTGCTCTTGTGGCTCAAGCTTTTATTGGTAAGAAGCCACACCTTTTACAGGATGCTGATAAGCAATTCCAGCAACTTCAGCAGGCTAAGGTAATGGCTATGGAGATTCCTGCGATGTTGTATGATACACGGAATAATTGGGAGATAGACTTCGGTCTAGAAAGGGGACTCTGTGCACTGCTTATAGGCAAAGTTGATGAATGCCGTATGTGGTTGGGCTTAGACAGTGAGGATTCACAATATAGGAATCCAGCTATTGTGGAGTTTGTTTTGGAGAATTCAAATCGTGATGACAATGATGATCTCCCTGGACTATGCAAATTGTTGGAAACCTGGTTGGCAGGGGTTGTCTTTCCTAGGTTCAGAGACACCAAAGATAAAAAATTTAAACTCGGGGACTACTATGATGATCCTATGGTTTTGAGTTACTTGGAAAGAGTGGAGGTAGTTCAGGGTTCTCCTTTAGCTGCTGCTGCAGCTATGGCAAGGATTGGAGCCGAGCATGTGAAAGCTAGTGCTATGCAGGCACTGCAGAAAGTTTTTCCTTCCCGCTATACAGATAGAAACTCGGCTGAACCCAAGGATGTGCAAGAGACAGTGTTTAGTGTAGATCCTGTTGGTAACAATGTAGGCCGTGATGGTGAGCCTGGTGTCTTTATTGCAGAAGCTGTAAGACCCTCTGAAAACTTTGAAACTAATGATTATGCAATTCGAGCTGGGGTCTCAGAGAGTAGCGTTGATGAAACTACTGTTGAAATGTCCGTTGCTGATATGTTAAAGGAGGCAAGTGTGAAGATCCTAGCTGCTGGTGTGGCAATTGGACTGATTTCACTGTTCAGCCAGAAGTATTTTCTTAAAAGCAGCTCATCTTTTCAACGCAAGGATATGGTTTCTTCTATGGAATCTGATGTCGCTACCATAGGGTCAGTCAGAGCTGACGATTCAGAAGCACTTCCCAGAATGGATGCTAGGACTGCAGAGAATATAGTATCCAAGTGGCAGAAGATTAAGTCTCTGGCTTTTGGGCCTGATCACCGCATAGAAATGTTACCAGAGGTTTTGGATGGGCGAATGCTGAAGATTTGGACTGACAGAGCAGCTGAAACTGCGCAGCTTGGGTTGGTTTATGATTATACACTGTTGAAACTATCTGTTGACAGTGTGACAGTCTCAGCAGATGGAACCCGTGCTCTGGTGGAAGCAACTCTGGAGGAGTCTGCTTGTCTATCTGATTTGGTTCATCCAGAAAACAATGCTACTGATGTCAGAACCTACACAACAAGATACGAAGTTTTCTGGTCCAAGTCAGGGTGGAAAATCACTGAAGGCTCTGTTCTTGCATCATAATATACTCATATGTAGCATGTCTGAGCTTGCGAGATTCTCTTTGTTTTGTAAATTCTCTCTCTAAGTTAGTGTTTATAAATGAACACAAAAAAATTAACGTTCTTGGCACACCCTTTTCCTTGATCTAAACTATAACATAAGGGCTACAATTTTGGATTCTTTCGCAATCAGGTACAAGCAGAACTTGACTTATCTTACATTCAAGCCTTTCACAACTTAACTATCAGTGTTTGGAGACTTCTGTCTTGTTTATGTTTTATAATTGTGCTCTGGTTATCATCTGGTCAAGCGTATAGCAGAGAATGATTTGGTAAATCTCCAGCCAGATGATTTTACGTTTTCGGTTCTAGGTAACAAGCTGAGGCCAAACATTTCCTTCGGCATTCGACTTGGCTCAACAAATCCAAGCAGCTTAGCCACAAGAGAAGCACTTTCTTTTATGTGGTCCATATCTTGGGTGTTGG
CDS Sequence
Protein Sequence