Information report for AT5G42390
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes. DOI: 10.1046/j.1365-313x.2002.01416.x ; PMID: 12383089
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Mammalian cell entry genes in Streptomyces may provide clues to the evolution of bacterial virulence. DOI: 10.1038/srep01109 ; PMID: 23346366
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The CLP and PREP protease systems coordinate maturation and degradation of the chloroplast proteome in Arabidopsis thaliana. DOI: 10.1111/nph.18426 ; PMID: 35946374
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
Gene Resources
- UniProt: A0A1P8BEG1
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BEG1
- EnsemblPlants: AT5G42390.2
- Gramene: AT5G42390.2
- ExpressionAtlas: AT5G42390
- InterPro: IPR007863, IPR011249, IPR011765
- PANTHER: PTHR43690, PTHR43690:SF33
- SUPFAM: SSF63411
- Gene3D: 3.30.830.10
- SWISS-MODEL: A0A1P8BEG1
Sequences
cDNA Sequence
- >AT5G42390.2
GAGTTTAACAAAATAAAAATCAGGAAGGAGAAGACAATAAACGTAGCTAACCTCATCTCCCTCTTCTTTTTTTTTTGTTCTTTAATAGTTTCCGTCTCTCTTTTTCTCCTCCACCTCTCCTTTGTCCTCAATAGCCGACGATGGCTTCATCGTCCTCTTCCATTTTCACCGGTGTTAAGTTCTCTCCGATCTTAGCTCCCTTTAACTCCGGAGATAGCCGCCGCTCTCGATATCTAAAAGATAGCCGGAATAAAGTTAGGTTTAATCCATCGTCGCCGCGTCTCACTCCTCATCGTGTTCGCGTCGAAGCTCCGTCTTTAATTCCCTATAATGGTCTTTGGGCGGCGCAGCCAAATTCGCATAAGGGACGTTTAAAGAGGAACATTGTTTCGGGAAAAGAAGCTACCGGGATATCACTTTCTCAAGGACGTAATTTCTGTCTTACTTGTAAAAGGAATCAAGCTGGAATCAGAAGAGCATTACCTAGTGCCTTTGTGGATAGAACTGCATTTAGTTTGTCGAGGTCGAGTTTGACATCTTCTCTGAGGAAACATTCTCAGATTGTGAATGCAACTCTTGGACCAGATGAGCCACATGCTGCTGGTACAGCTTGGCCTGATGGTATTGTTGCGGAGAGACAAGATCTCGACTTATTGCCTCCTGAGATTGATAGTGCAGAGCTAGAAGCGTTTCTTGGTTGTGAACTTCCTTCTCATCCAAAGTTGCACCGGGGTCAATTGAAAAATGGGCTTCGATATCTTATTTTGCCAAACAAAGTTCCACCGAACAGATTTGAGGCACACATGGAAGTTCATGTAGGATCGATTGATGAGGAAGAAGATGAGCAAGGGATTGCTCATATGATAGAACATGTTGCTTTCCTTGGGAGCAAGAAACGTGAGAAACTTCTTGGTACAGGTGCCCGCTCTAATGCCTACACCGATTTCCACCATACAGTATTTCATATTCATTCTCCAACCCACACGAAGGACTCTGAGGATGACCTCTTCCCATCTGTGCTCGATGCCTTAAATGAGATAGCCTTTCACCCAAAATTTCTCTCTTCTCGAGTTGAGAAAGAAAGGCGGGCCATACTTTCAGAACTTCAGATGATGAATACAATTGAGTATCGTGTTGACTGCCAGTTGTTGCAACATCTACATTCTGAGAACAAGCTGGGTAGGAGGTTCCCTATTGGATTGGAAGAGCAGATTAAGAAGTGGGATGTTGACAAAATTAGAAAATTTCATGAGCGATGGTACTTCCCAGCCAATGCCACTCTATATATTGTGGGAGATATTGACAACATACCTCGGATAGTCCACAATATTGAAGCTGTGTTTGGAAAAAATGGTTTGGATAATGAATCAACACCCAGTTCTCCTAGTCCTGGTGCCTTCGGTGCCATGGCTAATTTTCTCGTTCCAAAGCTGCCAGCTGGTCTTGGTGGTACCTTTTCAAATGAGAAAACAAATACTGCTGATCAGTCTAAGATGATTAAAAGAGAAAGACATGCAATTCGTCCCCCGGTTGAGCATAATTGGTCGCTTCCTGGAACAAGTGTTGATCTAAAGCCTCCACAGATATTTAAGCACGAGCTTCTTCAGAATTTTGCAATCAACATGTTTTGCAAGATACCTGTTAGCAAGGTTCAGACATTTGGAGACCTGCGAAATGTTCTGATGAAAAGAATATTTCTCTCTGCTCTACATTTTCGAATTAATACGAGATACAAGAGTTCAAACCCACCATTTACGTCTGTTGAACTGGACCATAGTGATTCGGGAAGGGAAGGATGCACTGTTACGACTCTTACTGTCACCGCAGAGCCCCAAAATTGGCAAAATGCAGTCAAAGTTGCTGTCCAAGAGGTTCGAAGACTTAAAGAATTTGGTGTCACCAGGGGTGAACTTACACGTTACATGGATGCTCTTCTAAAAGATAGTGAACATCTTGCAGCTATGATAGATAATGTGTCTTCTGTTGATAACCTGGATTTTATCATGGAAAGTGATGCACTAAGCCACACGGTTATGGATCAGACGCAAGGACATGAGACCTTGGTTGCTGTAGCTGGAACTGTTACTCTTGAAGAGGTAAACACTGTTGGCGCCAAGGTGCTAGAATTTATTTCTGATTTCGGAAGACCCACTGCCCCTCTTCCCGCAGCAATAGTTGCTTGTGTTCCCACTAAGGTGCATGTTGATGGGGTTGGTGAGAGTGATTTCAATATATCTCCTGATGAAATAATAGAGTCTGTCAAATCAGGATTATTAGCACCCATTGAAGCTGAGCCTGAGCTCGAGGTGCCAAAAGAATTGATCTCTCAATCACAATTGAAAGAGTTAACCTTGCAGAGAAATCCATGTTTTGTCCCTATTCCTGGGTCAGGTTTAACCAAATTGCATGACAAAGAGACTGGGATCACTCAGCTTCGGTTATCCAATGGGATAGCTGTAAATTACAAGAAATCTACGACCGAATCCCGGGCAGGTGTCATGCGGCTCATTGTTGGTGGTGGACGAGCTGCTGAAACATCTGATTCCAAAGGAGCTGTGGTTGTTGGTGTTCGTACACTCAGCGAGGGTGGTCGAGTTGGAGACTTTTCAAGGGAGCAGGTGGAGCTGTTCTGTGTAAATCATTTGATAAACTGTTCGTTGGAGTCAACTGAGGAGTTCATTGCCATGGAATTCCGGTTTACTCTGAGAGACAATGGAATGCAAGCGGCTTTTCAGCTGCTTCACATGGTGCTTGAGCGTAGTGTCTGGTTGGAAGATGCATTTGATCGAGCAAGGCAGCTATATCTTTCGTATTTTCGATCAATTCCTAAAAGCTTGGAGCGTGCGACTGCTCATAAACTTATGATCGCTATGCTGAACGGTGATGAGCGTTTTGTTGAGCCGACACCTAAGTCACTACAGAGCTTGAATCTAGAATCTGTGAAAGATGCGGTCATGAGTCATTTTGTTGGGGACAATATGGAGGTAAGCATTGTGGGGGACTTTTCAGAGGAGGAAATCGAGCGTTGCATCCTTGATTACCTTGGTACAGTTAAAGCTAGCCATGATTCTGCAAAACCACCAGGATCTGAGCCTATCTTGTTTCGCCAACCTACAGCTGGCTTGCAATTTCAACAGGTATTCTTGAAGGATACTGATGAGAGAGCATGTGCATACATTGCGGGACCAGCGCCAAATCGATGGGGCTTTACAGTTGACGGGGATGACCTTTTTCAGTCTGTTAGCAAACTTCCTGTTGCTCATGATGGACTTTTGAAATCGGAGGAACAATTGCTAGAGGGAGGAGACAGGGAGTTGCAAAAGAAGCTTCGTGCCCACCCTCTTTTCTTTGGAGTTACAATGGGTCTTCTGGCCGAAATCATAAACTCAAGAATTTGTTGAGGAACTAACTGCCAGAATGAAGCACTGCTTAGAAAATGAACGTCATCGTGTGTCAACAAACGTTTGAATTTTAAGAGAATGCCTTTTTAGACCTCTGATTGTATTTTTGCTTCAGACCGGAGCCTGTCTACTTGCTATCTACCTATTATTTTACATGTATATATATATATTCTGCCA - >AT5G42390.1
GAGTTTAACAAAATAAAAATCAGGAAGGAGAAGACAATAAACGTAGCTAACCTCATCTCCCTCTTCTTTTTTTTTTGTTCTTTAATAGTTTCCGTCTCTCTTTTTCTCCTCCACCTCTCCTTTGTCCTCAATAGCCGACGATGGCTTCATCGTCCTCTTCCATTTTCACCGGTGTTAAGTTCTCTCCGATCTTAGCTCCCTTTAACTCCGGAGATAGCCGCCGCTCTCGATATCTAAAAGATAGCCGGAATAAAGTTAGGTTTAATCCATCGTCGCCGCGTCTCACTCCTCATCGTGTTCGCGTCGAAGCTCCGTCTTTAATTCCCTATAATGGTCTTTGGGCGGCGCAGCCAAATTCGCATAAGGGACGTTTAAAGAGGAACATTGTTTCGGGAAAAGAAGCTACCGGGATATCACTTTCTCAAGGACGTAATTTCTGTCTTACTTGTAAAAGGAATCAAGCTGGAATCAGAAGAGCATTACCTAGTGCCTTTGTGGATAGAACTGCATTTAGTTTGTCGAGGTCGAGTTTGACATCTTCTCTGAGGAAACATTCTCAGATTGTGAATGCAACTCTTGGACCAGATGAGCCACATGCTGCTGGTACAGCTTGGCCTGATGGTATTGTTGCGGAGAGACAAGATCTCGACTTATTGCCTCCTGAGATTGATAGTGCAGAGCTAGAAGCGTTTCTTGGTTGTGAACTTCCTTCTCATCCAAAGTTGCACCGGGGTCAATTGAAAAATGGGCTTCGATATCTTATTTTGCCAAACAAAGTTCCACCGAACAGATTTGAGGCACACATGGAAGTTCATGTAGGATCGATTGATGAGGAAGAAGATGAGCAAGGGATTGCTCATATGATAGAACATGTTGCTTTCCTTGGGAGCAAGAAACGTGAGAAACTTCTTGGTACAGGTGCCCGCTCTAATGCCTACACCGATTTCCACCATACAGTATTTCATATTCATTCTCCAACCCACACGAAGGACTCTGAGGATGACCTCTTCCCATCTGTGCTCGATGCCTTAAATGAGATAGCCTTTCACCCAAAATTTCTCTCTTCTCGAGTTGAGAAAGAAAGGCGGGCCATACTTTCAGAACTTCAGATGATGAATACAATTGAGTATCGTGTTGACTGCCAGTTGTTGCAACATCTACATTCTGAGAACAAGCTGGGTAGGAGGTTCCCTATTGGATTGGAAGAGCAGATTAAGAAGTGGGATGTTGACAAAATTAGAAAATTTCATGAGCGATGGTACTTCCCAGCCAATGCCACTCTATATATTGTGGGAGATATTGACAACATACCTCGGATAGTCCACAATATTGAAGCTGTGTTTGGAAAAAATGGTTTGGATAATGAATCAACACCCAGTTCTCCTAGTCCTGGTGCCTTCGGTGCCATGGCTAATTTTCTCGTTCCAAAGCTGCCAGCTGGTCTTGGTGGTACCTTTTCAAATGAGAAAACAAATACTGCTGATCAGTCTAAGATGATTAAAAGAGAAAGACATGCAATTCGTCCCCCGGTTGAGCATAATTGGTCGCTTCCTGGAACAAGTGTTGATCTAAAGCCTCCACAGATATTTAAGCACGAGCTTCTTCAGAATTTTGCAATCAACATGTTTTGCAAGATACCTGTTAGCAAGGTTCAGACATTTGGAGACCTGCGAAATGTTCTGATGAAAAGAATATTTCTCTCTGCTCTACATTTTCGAATTAATACGAGATACAAGAGTTCAAACCCACCATTTACGTCTGTTGAACTGGACCATAGTGATTCGGGAAGGGAAGGATGCACTGTTACGACTCTTACTGTCACCGCAGAGCCCCAAAATTGGCAAAATGCAGTCAAAGTTGCTGTCCAAGAGGTTCGAAGACTTAAAGAATTTGGTGTCACCAGGGGTGAACTTACACGTTACATGGATGCTCTTCTAAAAGATAGTGAACATCTTGCAGCTATGATAGATAATGTGTCTTCTGTTGATAACCTGGATTTTATCATGGAAAGTGATGCACTAAGCCACACGGTTATGGATCAGACGCAAGGACATGAGACCTTGGTTGCTGTAGCTGGAACTGTTACTCTTGAAGAGGTAAACACTGTTGGCGCCAAGGTGCTAGAATTTATTTCTGATTTCGGAAGACCCACTGCCCCTCTTCCCGCAGCAATAGTTGCTTGTGTTCCCACTAAGGTGCATGTTGATGGGGTTGGTGAGAGTGATTTCAATATATCTCCTGATGAAATAATAGAGTCTGTCAAATCAGGATTATTAGCACCCATTGAAGCTGAGCCTGAGCTCGAGGTGCCAAAAGAATTGATCTCTCAATCACAATTGAAAGAGTTAACCTTGCAGAGAAATCCATGTTTTGTCCCTATTCCTGGGTCAGGTTTAACCAAATTGCATGACAAAGAGACTGGGATCACTCAGCTTCGGTTATCCAATGGGATAGCTGTAAATTACAAGAAATCTACGACCGAATCCCGGGCAGGTGTCATGCGGCTCATTGTTGGTGGTGGACGAGCTGCTGAAACATCTGATTCCAAAGGAGCTGTGGTTGTTGGTGTTCGTACACTCAGCGAGGGTGGTCGAGTTGGAGACTTTTCAAGGGAGCAGGTGGAGCTGTTCTGTGTAAATCATTTGATAAACTGTTCGTTGGAGTCAACTGAGGAGTTCATTGCCATGGAATTCCGGTTTACTCTGAGAGACAATGGAATGCAAGCGGCTTTTCAGCTGCTTCACATGGTGCTTGAGCGTAGTGTCTGGTTGGAAGATGCATTTGATCGAGCAAGGCAGCTATATCTTTCGTATTTTCGATCAATTCCTAAAAGCTTGGAGCGTGCGACTGCTCATAAACTTATGATCGCTATGCTGAACGGTGATGAGCGTTTTGTTGAGCCGACACCTAAGTCACTACAGAGCTTGAATCTAGAATCTGTGAAAGATGCGGTCATGAGTCATTTTGTTGGGGACAATATGGAGGTAAGCATTGTGGGGGACTTTTCAGAGGAGGAAATCGAGCGTTGCATCCTTGATTACCTTGGTACAGTTAAAGCTAGCCATGATTCTGCAAAACCACCAGGATCTGAGCCTATCTTGTTTCGCCAACCTACAGCTGGCTTGCAATTTCAACAGGTATTCTTGAAGGATACTGATGAGAGAGCATGTGCATACATTGCGGGACCAGCGCCAAATCGATGGGGCTTTACAGTTGACGGGGATGACCTTTTTCAGTCTGTTAGCAAACTTCCTGTTGCTCATGATGGACTTTTGAAATCGGAGGAACAATTGCTAGAGGGAGGAGACAGGGAGTTGCAAAAGAAGCTTCGTGCCCACCCTCTTTTCTTTGGAGTTACAATGGGTCTTCTGGCCGAAATCATAAACTCAAGAATTTGTTGAGGAACTAACTGCCAGAATGAAGCACTGCTTAGAAAATGAACGTCATCGTGTGTCAACAAACGTTTGAATTTTAAGAGAATGCCTTTTTAGACCTCTGATTGTATTTTTGCTTCAGACCGGAGCCTGTCTACTTGCTATCTACCTATTATTTTACATGTATATATATATATTCTGCCA
CDS Sequence
Protein Sequence