Gene Details:
- Gene ID: AT5G42200
- Gene Symbol: ATL23
- Gene Name: Arabidopsis Toxicos en Levadura 23
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation. DOI: 10.1111/j.1365-313X.2005.02403.x ; PMID: 15918878
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation. DOI: 10.1093/aob/mci217 ; PMID: 16081496
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
Sequences:
cDNA Sequence
- >AT5G42200.1
CGAAAAGAAACAAAATCATAACAATAATAGTTTAACCTAAACCCTGATATTTGGCTCTACCGTGTCCTAGCCTCTCCTCTTTGTATAAATAGCCGTTACTCTTTTTCACATGATTTTCACTACCAACAACACTTAGAGAACAAGCAGAGGAATATAACTTTTTTTTTCTTTTTCCTTTTTGCTTTTTTACAACCAAAAAAATAAAGCAAGCCGTAGAGAGCAAGAGACGGTGTAAAGATGCACTACACACGCATCTCGCCGGCTTTAGTACCATCTCTATCACCAACCGCCGCGGCTGAATCTAGCGGTGGTGGGACGATGATAGCTACTGTTTTCATGGCCCTTCTCCTCCCCTGCGTCGGCATGTGCATCGTCTTCCTAATCTATCTATTCCTCTTGTGGTGCTCCACACGGCGTCGTATCGAACGCCTTCGATTTGCTGAACCGGTTAAACCGGTCACAGGTAAAGGCCTTTCGGTGTTGGAGCTCGAGAAAATCCCTAAACTCACCGGAAGAGAGCTAGCCGTAATAGCTAGATCAACGGAATGTGCTGTTTGCCTTGAAGATATAGAGAGTGGTCAATCGACTCGTCTAGTTCCCGGTTGCAACCATGGGTTTCACCAATTATGTGCTGATACGTGGCTATCTAACCACACGGTTTGTCCAGTTTGCCGCGCCGAGCTGGCTCCGAACCTACCTCAATGTAATGAAAATCAAAGTCCATGTTAGAAACAGAATTTTCAAAAACATTCTTTCCTTCTTTTTTACTCGTTTTGTGTACTTCTCTTGTTTTTCCCTTTTCTTAGTTTTGTGTAAGCGTTATAGAGAGAGAAGTTTCCAGGTTGTAACTAGCCTTGTTGTTTTTTTTTGTACATGAAATTAGTTTTAGAGTAAATTACGAAATTTACAGTTATGTCATTGTATTTACAACAATTTTTCTTCAACCATTACAATAAGTATATCAATGATAGAGTTAAACTTTGGGTCCAACAAAAAATAAATAAA
CDS Sequence
Protein Sequence