Information report for AT5G42100
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- root , cauline leaf , rosette leaf , fruit , flower , stem
Literature and News
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Expression of beta-galactosidase and beta-xylosidase genes during microspore and pollen development. DOI: 10.1007/s00425-004-1409-0 ; PMID: 15517348
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Chilling of dormant buds hyperinduces FLOWERING LOCUS T and recruits GA-inducible 1,3-beta-glucanases to reopen signal conduits and release dormancy in Populus. DOI: 10.1105/tpc.110.081307 ; PMID: 21282527
- Analysis of a novel mutant allele of GSL8 reveals its key roles in cytokinesis and symplastic trafficking in Arabidopsis. DOI: 10.1186/s12870-018-1515-y ; PMID: 30466394
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A plasmodesmata-associated beta-1,3-glucanase in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02986.x ; PMID: 17270015
- Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins. DOI: 10.1074/mcp.M300079-MCP200 ; PMID: 14517339
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins. DOI: 10.1074/mcp.M300079-MCP200 ; PMID: 14517339
Gene Resources
- UniProt: F4K020
- EMBL: CP002688
- AlphaFoldDB: F4K020
- EnsemblPlants: AT5G42100.2
- Gramene: AT5G42100.2
- Orthologous matrix: ECITPIL
- ExpressionAtlas: AT5G42100
Sequences
cDNA Sequence
- >AT5G42100.2
ATCACTGCCTCCTCTATCATCTTGCTCACAACCACTCACTACGCTCTCTCTCTCTCTCTCTCACTTCATCTATGGCTTCTTCTTCTCTGCAGTCTCTCTTCTCTCTGTTTTGCCTTGCTCTGTTCTCTCTTCCTCTCATCGTCTCCTCCATCGGCATCAACTATGGCCAGGTCGCTAACAACCTTCCTCCCCCTAAAAACGTCATCCCTCTCCTCAAGTCTGTGGGAGCTACAAAAGTCAAGCTCTATGACGCCGATCCACAAGCCCTACGTGCCTTCGCCGGCTCCGGCTTCGAGCTCACCGTGGCCCTCGGTAACGAGTACCTGGCTCAGATGAGCGACCCTATTAAAGCCCAAGGCTGGGTGAAGGAGAACGTCCAAGCTTACCTCCCAAACACCAAGATCGTGGCCATCGTAGTGGGAAACGAAGTCCTCACCTCAAACCAGTCAGCCCTCACGGCAGCCCTCTTCCCGGCTATGCAAAGCATCCACGGTGCTCTGGTGGATTGTGGCCTAAACAAGCAGATCTTTGTGACGACGGCTCACTCACTAGCCATCTTGGATGTATCCTACCCTCCCTCGGCCACTTCCTTCCGCCGCGACCTCCTCGGCTCCCTCACTCCCATCTTGGACTTCCACGTCAAGACTGGCTCACCAATCCTCATCAACGCCTACCCTTTCTTCGCCTACGAAGAAAACCCCAAACACGTTTCTCTCGACTTCGTACTCTTCCAACCAAATCAAGGCTTCACCGATCCTGGCTCTAATTTCCACTACGACAACATGCTCTTCGCTCAGGTCGACGCAGTCTATCACGCTCTTGACGCTGTCGGCATCAGCTACAAGAAAGTTCCCATTGTCGTCTCCGAGACCGGATGGCCTTCCAACGGTGACCCGCAAGAAGTCGGAGCCACCTGCGACAATGCTCGCAAGTACAATGGGAATCTGATCAAGATGATGATGAGCAAGAAGATGAGGACGCCTATACGACCTGAGTGCGATCTCACCATCTTCGTCTTTGCTCTCTTTAACGAGAACATGAAGCCTGGACCAACCTCCGAGAGGAACTACGGTCTCTTCAACCCTGACGGAACTCCGGTTTACTCACTTGGGATCAAGACCTCTTCCACTCATAGTAGTGGTAGTGGTAGCAGCAACTCCACTGGTGGTAGTAGCAGTGGCGGTGGCGGTAACACTGGTGGCTCTTCCAGCGGTGGTGGCATCTATCAGCCAGTCACGGGTAACCCATCACCGGATTACATGTCCATTTCCTCCGCCGGGGTAACGTTTTCGACTTTACACTTCATTTGTTGTTTTACTTTGACAATTTTCGTAGACATTTAGGACTAGAAGGTCGTTACTGTTAAGTTGCATATTTAGACATATTTTGTCACTCTATTTATCTGTTTTGTTTCATTTAAACAATAAATTTAGTGGTAAAAGAAAAAAAAATCACAAAGCTCGAATAAGGAAGGATTAACATTGTGGTAAAGTTAGTGACTTTTGGTTAAAAAGTTGGAATCTTTATTATAAACTCGAAAAACTGTGACAATGTGTTTTGGATTGGTTATCACGTGGAGATGACTCTTGTTTTGTTACTTTTGTCTGAAAATATAATTGATTTAGAGTGCCTCACTTTTTGACTTGTTGACCTCTTGAATAAACGAATTAAAGGAGTGTGACATAGGCAATGCTTGTTGACGTTTTTGCAGGGAAAAGGCAGATTCGTTGAGTG - >AT5G42100.1
ATCACTGCCTCCTCTATCATCTTGCTCACAACCACTCACTACGCTCTCTCTCTCTCTCTCTCACTTCATCTATGGCTTCTTCTTCTCTGCAGTCTCTCTTCTCTCTGTTTTGCCTTGCTCTGTTCTCTCTTCCTCTCATCGTCTCCTCCATCGGCATCAACTATGGCCAGGTCGCTAACAACCTTCCTCCCCCTAAAAACGTCATCCCTCTCCTCAAGTCTGTGGGAGCTACAAAAGTCAAGCTCTATGACGCCGATCCACAAGCCCTACGTGCCTTCGCCGGCTCCGGCTTCGAGCTCACCGTGGCCCTCGGTAACGAGTACCTGGCTCAGATGAGCGACCCTATTAAAGCCCAAGGCTGGGTGAAGGAGAACGTCCAAGCTTACCTCCCAAACACCAAGATCGTGGCCATCGTAGTGGGAAACGAAGTCCTCACCTCAAACCAGTCAGCCCTCACGGCAGCCCTCTTCCCGGCTATGCAAAGCATCCACGGTGCTCTGGTGGATTGTGGCCTAAACAAGCAGATCTTTGTGACGACGGCTCACTCACTAGCCATCTTGGATGTATCCTACCCTCCCTCGGCCACTTCCTTCCGCCGCGACCTCCTCGGCTCCCTCACTCCCATCTTGGACTTCCACGTCAAGACTGGCTCACCAATCCTCATCAACGCCTACCCTTTCTTCGCCTACGAAGAAAACCCCAAACACGTTTCTCTCGACTTCGTACTCTTCCAACCAAATCAAGGCTTCACCGATCCTGGCTCTAATTTCCACTACGACAACATGCTCTTCGCTCAGGTCGACGCAGTCTATCACGCTCTTGACGCTGTCGGCATCAGCTACAAGAAAGTTCCCATTGTCGTCTCCGAGACCGGATGGCCTTCCAACGGTGACCCGCAAGAAGTCGGAGCCACCTGCGACAATGCTCGCAAGTACAATGGGAATCTGATCAAGATGATGATGAGCAAGAAGATGAGGACGCCTATACGACCTGAGTGCGATCTCACCATCTTCGTCTTTGCTCTCTTTAACGAGAACATGAAGCCTGGACCAACCTCCGAGAGGAACTACGGTCTCTTCAACCCTGACGGAACTCCGGTTTACTCACTTGGGATCAAGACCTCTTCCACTCATAGTAGTGGTAGTGGTAGCAGCAACTCCACTGGTGGTAGTAGCAGTGGCGGTGGCGGTAACACTGGTGGCTCTTCCAGCGGTGGTGGCATCTATCAGCCAGTCACGGGTAACCCATCACCGGATTACATGTCCATTTCCTCCGCCGGGGTAACGTTTTCGACTTTACACTTCATTTGTTGTTTTACTTTGACAATTTTCGTAGACATTTAGGACTAGAAGGTCGTTACTGTTAAGTTGCATATTTAGACATATTTTGTCACTCTATTTATCTGTTTTGTTTCATTTAAACAATAAATTTAGTGGTAAAAGAAAAAAAAATCACAAAGCTCGAATAAGGAAGGATTAACATTGTGGTAAAGTTAGTGACTTTTGGTTAAAAAGTTGGAATCTTTATTATAAACTCGAAAAACTGTGACAATGTGTTTTGGATTGGTTATCACGTGGAGATGACTCTTGTTTTGTTACTTTTGTCTGAAAATATAATTGATTTAGAGTGCCTCACTTTTTGACTTGTTGACCTCTTGAATAAACGAATTAAAGGAGTGTGACATAGGCAATGCTTGTTGACGTTTTTGCAGGGAAAAGGCAGATTCGTTGAGTG
CDS Sequence
Protein Sequence