Information report for AT5G42090
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors. DOI: 10.1186/gb-2006-7-10-r96 ; PMID: 17064408
- Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling. DOI: 10.1186/gb-2008-9-7-r120 ; PMID: 18671868
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- A G protein-coupled receptor-like module regulates cellulose synthase secretion from the endomembrane system in Arabidopsis. DOI: 10.1016/j.devcel.2021.03.031 ; PMID: 33878345
Gene Resources
- UniProt: Q9FHX6
- EMBL: AB017067, AY059846, AY093263
- AlphaFoldDB: Q9FHX6
- EnsemblPlants: AT5G42090.1
- Gramene: AT5G42090.1
- KEGG: ath:AT5G42090
- Orthologous matrix: FANCHPQ
- ExpressionAtlas: AT5G42090
- InterPro: IPR009637, IPR053937, IPR054103
- PANTHER: PTHR21229, PTHR21229:SF22
Sequences
cDNA Sequence
- >AT5G42090.1
TCGGTTGGAATCGGTGAATTGGTGAAATTTTTGTTTCTAGAAATCAACTAATCCGTCAAAGATGGTTTATTCCCTTAATGATGAAGGAAAATGGGTTCTCTTGTTGCTAATAAAATAATGGTATTTATTTTGTTTCTTAGAAAGAAAAAAAAGACTAATTTAATTTGGTTGGTCACACACAACCGTTTTCATCGGAAGAAGAACAAGTTGGATTGATTTTGCTTTGGATCTCACATCTGAGATCAGATTAATCTCTCTGTGAAGTCGAAGAACGAAACCCTAGTTCCCATGGATCTCTCTTCACGCTTCTCATCGATCCTTATCCTTCTCTTGATCTCCATCTCCATAGCTTCGGCTGAGATTCGTAAATCAGAGATCCGATCCGATGATCGTCCAATCATCCCTTTAGACGAATTCGGTTTCACTCACAGCGGTCGTCTTGAGCTTGACGCTTCCAAGATCTGGCTTTCCAACAGCAATCCCGATCTCGATCTCTCCAAAGTGGGCTTCTTTCTCTGCACTAGAGACGCTTGGGTTCATGTGATCCAACAGCTTGAAGAAGAAGAGATCACGTGCGCTCTACAATCAGATCTCGTTAAGCATGTGTTCACCTTCAACAATCTCAAGGGAGGAGATAAGAGCAGATTCTCCACCGTATTCACCGAGAACGATGCGGATCAGTACTCTCTCGTCTTCGCTAATTGTCTCCAACAGGTCAAAATCAGTATGGATGTTAGATCCGCTATGTATAACCTTGAAGGTAAAAAGGGAGGTCGTGATTATCTCTCTGCTGGAAGAACTGTTCTTCCTAAGGTCTATTTCTTATTCTCTGTTATCTATTTCTCTCTCGCCGCCACGTGGATCTACGTTCTCTATAAGAAACGTCTCACTGTTTTCGCAATCCATTTCTTCATGTTGGGAGTTGTTGTCTTGAAAGCTTTGAACCTTCTTTGTGAGGCTGAGGATAAGTCGTACATTAAGAAAACTGGAACTGCTCATGGTTGGGATGTCTTGTTCTACATTTTCAATTTCCTTAAGGGTATCACTCTTTTCACTTTGATCGTCTTGATCGGCACCGGTTGGTCTTTCTTGAAGCCCTACTTGCAGGACAAGGAAAAGAAGGTCTTGATGATTGTCATTCCTCTCCAGGTTGTCGCTAACTTTGCTCAGGTGGTTATCGATGAGACTGGACCGTATGGCCAAGATTGGGTCACGTGGAAACAGATCTTTTTGCTTGTTGATGTCGTCTGTTGCTGTGCTGTTCTGTTTCCCATTGTCTGGTCCATCAAAAACTTGCGTGAGGCGGCTAAGACTGACGGGAAGGCTGCTGTGAACCTCGTTAAGTTAACTCTGTTTAGGCAGTACTACATTGTGGTTATCTGCTACATCTACTTCACTCGTGTTGTTGTGTATGCACTGGAGACCATTACCTCTTACAAGTATATGTGGACTAGTGTTGTTGCCAGCGAGTTAGCCACACTTGCCTTCTATCTGTTTACTGGCTACAAGTTCAGGCCAGAGGTGCATAACCCGTACTTTGTTGTTGACGATGAGGAAGAAGAGGCTGCTGCTGAGGCTCTGAAGCTTGAAGACGAGTTTGAATTGTAAGTCATCACTGGAATAATCGTGTCACGTGTGAGTCAGTAAAAAGAAACATACTTTGTTTGACAGGATGATTGAGAGTAAACCGGATCATCAGCTGCCTGCTAAACCGCCTTCTCTTCTTTGGTTTTTTCCTCTTGTTATCTTTATTAGAATGCAATACCTGTTTTGTTTTTACTTGAATTGTTAGGATACTTATATAGACTCTATGAATGTCTTGTCCCCCAATGCATAGTATGTGTATTACTGGTAACATAAAACGCTTGGTGCTGCTCGTTATACTTAATCTGAGTCTCTGCTTTTCATTTGATAGACAAAATGGCTGATTAGAAAAGTTGCTTAAGGAAGCAAACTTTGTTCACTACTATTTGCCTTGTTGGATCTGTATTTATATCTTTGTCTGAAGTGACAGACGAAAGAATTGGTATAGTGTGTGGAGGTGGAAGAGATTAACATTGAATGTTTGGTGGACCATAGAGATTGATTGGTCACATAAATACAAAAAGTTTGGCGGAAATTAGGTGTACGAATGCGGAGGTGATTTATTGAAGGGAATACATATTTTGGACCTTGAAAAACCGGATCTGTACCGGTTTGGGAAGGAAGGGTTACCGTCCAGTGTATCGGATTGCTTCTTCAGAATCCGGTGCCGTCGATGTGCTTGTTGGGGGGACTAGCTTTCTGGGAGTCTTGTGGTGGGTTGGTGCGCCGGTGGGGTTGATTCGAGGACGAAAACCGGTCTCTTTCGTCGGAGTTTCTCGAGCATCGGTTGCGGCCTCGAAACTGTAGGGCTTGAGCCCGCCGGATCTAATGCTCCGGTCTCTCTGCTAGCTTCCATCAACAAGCGGCGATCTTCCTTCTTTGCCGACATGTTTTCCGATTTGCTAATTTTGTAACTGGATTTGATGTTGTTTTTGTTGCGGCCCAAGCCCATTTGGGATGAGGATTAATAATATTT
CDS Sequence
Protein Sequence