Information report for AT5G42050
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance. DOI: 10.1046/j.1365-313x.2003.01867.x ; PMID: 14535883
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis. DOI: 10.1104/pp.105.070508 ; PMID: 16500996
- Use of differential display for the identification of touch-induced genes from an ethylene-insensitive Arabidopsis mutant and partial characterization of these genes. DOI: 10.1016/j.jplph.2005.12.005 ; PMID: 16533544
- Rapid transcriptome changes induced by cytosolic Ca2+ transients reveal ABRE-related sequences as Ca2+-responsive cis elements in Arabidopsis. DOI: 10.1105/tpc.106.042713 ; PMID: 16980540
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. DOI: 10.1007/s12192-012-0398-3 ; PMID: 23334891
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Functional and regulatory conservation of the soybean ER stress-induced DCD/NRP-mediated cell death signaling in plants. DOI: 10.1186/s12870-016-0843-z ; PMID: 27405371
- The asparagine-rich protein NRP interacts with the Verticillium effector PevD1 and regulates the subcellular localization of cryptochrome 2. DOI: 10.1093/jxb/erx192 ; PMID: 28633330
- The Asparagine-Rich Protein NRP Facilitates the Degradation of the PP6-type Phosphatase FyPP3 to Promote ABA Response in Arabidopsis. DOI: 10.1016/j.molp.2017.11.006 ; PMID: 29175650
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
- Abscisic acid employs NRP-dependent PIN2 vacuolar degradation to suppress auxin-mediated primary root elongation in Arabidopsis. DOI: 10.1111/nph.17783 ; PMID: 34618941
- Stress response proteins NRP1 and NRP2 are pro-survival factors that inhibit cell death during ER stress. DOI: 10.1093/plphys/kiab335 ; PMID: 34618053
- Phytochrome B Positively Regulates Red Light-Mediated ER Stress Response in Arabidopsis. DOI: 10.3389/fpls.2022.846294 ; PMID: 35283886
Gene Resources
- UniProt: A0A178UIL7
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178UIL7
- EnsemblPlants: AT5G42050.1
- Gramene: AT5G42050.1
- KEGG: ath:AT5G42050
- Orthologous matrix: IDEDHQI
- ExpressionAtlas: AT5G42050
- InterPro: IPR013989, IPR044832
- PANTHER: PTHR46034, PTHR46034:SF37
- PROSITE: PS51222
- SWISS-MODEL: A0A178UIL7
Sequences
cDNA Sequence
- >AT5G42050.1
TATTTATTAGTATTCCTTATTTAATAAATTACTTTTCACTTAATCATCCAACTTTGTCAGATTCACACGCAACCTTGAAAAAATAAAATAGAATGGTATTGTGACTTTCGTGGAAATTTCTACTTAGATGACACAGTTGCTCCAATTAAAAGCTTACAACTTTTTCTTCATCTTTCTTTATATTTCTCACCCATTTTTCACCAATTTCTCTCCACTTAAAACCAACCCCAATTCTCACCAAAAATCGCAAAAAAGATTTCAACTTTCGATAAACCCAGATCGAAAAATCAGATTTTTCCAGATCAATCAGAGAGTTAGAGATGGAGTATAATAACAACAATCAGCAATCTTTTTGGCAGTTCAGCGACCAGCTGAGAGTTCAGACACCGAATCTAGCGAATCTGTCTCTCAACGACTCGATCTGGAGCACAAACTCTGTCTTCAAAGAGCGTCGAAACTTAGACATAGCCGCCACCACCGACAAGAACAACAACCAGATCGACTATTATCAGAAGAAGACAACTTCCGACAACATCAATTCCAACTGGAACTGGAAGTCTTCTGGTTCAAACAACGACATGGGTTTAGGATTCGGACCTGTGGGTTCAAAATCCACCGTCGATTTAAACCCAATCGACAAATTCAACTCACCGTTCAACGACACGTGGAAATTCAACTCAGTCAACGTTAACGTTAACGGTTACTCACCGTCAAGCGCCGTTAACGGAGATTTCAACAAAGGGGTTTACACGTCGATGAAGAAGTATGGGTACAACGTCAATCTAAAGAACAACAACAAGAACAAAGGAATCGATGAAGATCATCAGATTCAGAAAGGTGGGAAGAAGAACAGAAAGAATCAGCAGAACAATAATAACCAGAGGAACGAAGACGACAAGAACAATGGTTTGGACAAGAGGTTTAAGACTCTTCCTCCAGCAGAAGCTTTGCCAAGAAACGAAACCATTGGTGGTTACATCTTTGTCTGCAACAACGATACCATGGAAGAGAATCTCAAACGCCAGCTTTTCGGATTGCCACCAAGATACAGGGACTCGGTTAGAGCGATAACTCCAGGACTTCCTCTGTTTCTTTACAACTACTCCACTCACCAACTTCATGGAATCTACGAGGCAGCTAGCTTCGGAGGAACAAACATTGAGTTGAATGCTTTTGAAGACAAGAAATGTCCTGGCGAATCTCGTTTCCCTGCTCAGGTGAGGGCCATAACGAGGAAAGTATGTTTGCCACTGGAAGAAGATTCTTTCCGACCCATTTTGCACCACTACGACGGTCCTAAGTTCCGACTCGAACTCAGTGTCCCTGAGGTGCTTTCTCTATTGGACATTTTTGCTGACCAAAACCCTTGAATTGGGTAATACCAATGAAGAACACAAAACAGTGGTTTGTTACTTCAAATCCAGAAAGAGAGAGATACCCCATTATACATATATGATTATAAGGAGGAGTATTAATAATAATTGTCTGAAGAAATGGTATTTTACTAGTTTATACAGTTTCTTTCTTAAGTATATTCCCAGGAGATATGGGATAAATAGAAGATGTGCTATTTTTGTGTGGGTGGATGAAGAATAGATCTCATCTCCGCGCTTTTTTCTTTTTGTAAATTATATAAAATAACATATGTACAACCCCAAAAATAGGGAGAAATGAGATGATGAACTCTTATCAATTTGTGTTTGATATTTTTATTATTGCTCCTATTCACTTCTTGCCCAATTCTATCTTGAATTTCATTTATACTAGTCGGAATAAACCGGCCA
CDS Sequence
Protein Sequence