Information report for AT5G41520
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis. DOI: 10.1186/1471-2229-12-160 ; PMID: 22963533
- Late ribosomal protein localization in Arabidopsis thaliana differs to that in Saccharomyces cerevisiae. DOI: 10.1002/2211-5463.12487 ; PMID: 30186745
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A178UD67
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UD67
- EnsemblPlants: AT5G41520.1
- Gramene: AT5G41520.1
- KEGG: ath:AT5G41520
- Orthologous matrix: NWQHLYF
- ExpressionAtlas: AT5G41520
- InterPro: IPR005326, IPR036388, IPR037447
- PANTHER: PTHR12146, PTHR12146:SF28
- Gene3D: 1.10.10.10
- OrthoDB: A0A178UD67
- SWISS-MODEL: A0A178UD67
Sequences
cDNA Sequence
- >AT5G41520.1
GCGGCTTCAGTCGAAATTAGGGTTTCGCGTTAGGAGAAGAAGTTAAAGCAAAACACATACAAACGCAGTCACCTTCTCTATCGCCTCCTTCTTCAATCTCATCGCAATCATGATCATATCAGAGACTAACCGCCGTGAGATCTCCAAGTACCTCTTCAAAGAGGGTGTTTTGTTTGCTAAAAAGGATTTCAACTTACCACAACATCCTTTGATTGAGAGTGTTCCAAATCTGCAAGTTATCAAGTTGATGCAGAGTTTCAAATCTAAGGAATATGTGAGAGAGACCTTTGCTTGGATGCATTACTACTGGTTCCTCACAAATGAAGGTATTGACTTTCTCAGGACTTACCTTAATCTCCCATCTGAGATTGTTCCTGCTACTTTGAAGAAGCAACAGAAGCCTCTTGGTCGACCTTTTGGAGGTGGTGGTGACCGTCCCCGTGGCCCTCCTCGTGGTGATGGAGAGAGGAGGTTTGGTGACAGAGATGGATACCGTGGAGGTCCTAAATCAGGTGGAGAGTATGGTGACAAGGCTGGAGCACCTGCTGATTACCAGCCTGGCTTCAGGGGTGGAGCTGGTGGAGCTAGGCAAGGGTTTGGTCGTGGAGCTGGTGGTTTCGGTGGTGGTGCTGCTGGATCTGATCTTCCTTGAAAAGGACTTTCTTGTTTCTTTTTGGTCTTATTTAAGGTTACATAGTACCTTTGATTTGAGAACGAATGTGTCTTTTGGAACTTTGTTTCTTTCTCTAAAACCATCTCACAATATGATTGTTTTTTACGTTAGAATTTTATGAAGAAATGTTGGATCGTTACATGAATCTTTTTACACTGTCCTCCATTTTAAATTCTCCTATTTAGTTTTTTTTCGCAGCTTACAAGTGACGTGTATATATAAAGTTCTGTTAAAACTGTTGTATGAATAATCATGAAAAATATCGATATTACTGAAATCTAGATGTTGAAATTTTACACTCATATGCACAAAACAACGTAAAAGAGAAACCCAAC - >AT5G41520.2
GCGGCTTCAGTCGAAATTAGGGTTTCGCGTTAGGAGAAGAAGTTAAAGCAAAACACATACAAACGCAGTCACCTTCTCTATCGCCTCCTTCTTCAATCTCATCGCAATCATGATCATATCAGAGACTAACCGCCGTGAGATCTCCAAGTACCTCTTCAAAGAGGGTGTTTTGTTTGCTAAAAAGGATTTCAACTTACCACAACATCCTTTGATTGAGAGTGTTCCAAATCTGCAAGTTATCAAGTTGATGCAGAGTTTCAAATCTAAGGAATATGTGAGAGAGACCTTTGCTTGGATGCATTACTACTGGTTCCTCACAAATGAAGGTATTGACTTTCTCAGGACTTACCTTAATCTCCCATCTGAGATTGTTCCTGCTACTTTGAAGAAGCAACAGAAGCCTCTTGGTCGACCTTTTGGAGGTGGTGGTGACCGTCCCCGTGGCCCTCCTCGTGGTGATGGAGAGAGGAGGTTTGGTGACAGAGATGGATACCGTGGAGGTCCTAAATCAGGTGGAGAGTATGGTGACAAGGCTGGAGCACCTGCTGATTACCAGCCTGGCTTCAGGGGTGGAGCTGGTGGAGCTAGGCAAGGGTTTGGTCGTGGAGCTGGTGGTTTCGGTGGTGGTGCTGCTGGATCTGATCTTCCTTGAAAAGGACTTTCTTGTTTCTTTTTGGTCTTATTTAAGGTTACATAGTACCTTTGATTTGAGAACGAATGTGTCTTTTGGAACTTTGTTTCTTTCTCTAAAACCATCTCACAATATGATTGTTTTTTACGTTAGAATTTTATGAAGAAATGTTGGATCGTTACATGAATCTTTTTACACTGTCCTCCATTTTAAATTCTCCTATTTAGTTTTTTTTCGCAGCTTACAAGTGACGTGTATATATAAAGTTCTGTTAAAACTGTTGTATGAATAATCATGAAAAATATCGATATTACTGAAATCTAGATGTTGAAATTTTACACTCATATGCACAAAACAACGTAAAAGAGAAACCCAAC
CDS Sequence
Protein Sequence