Information report for AT5G41000
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence. DOI: 10.1104/pp.103.030536 ; PMID: 14730065
- Arabidopsis Yellow Stripe-Like2 (YSL2): a metal-regulated gene encoding a plasma membrane transporter of nicotianamine-metal complexes. DOI: 10.1111/j.1365-313X.2004.02128.x ; PMID: 15255869
- Integrating membrane transport with male gametophyte development and function through transcriptomics. DOI: 10.1104/pp.105.074708 ; PMID: 16607029
- Metal movement within the plant: contribution of nicotianamine and yellow stripe 1-like transporters. DOI: 10.1093/aob/mcn207 ; PMID: 18977764
- The Arabidopsis YELLOW STRIPE LIKE4 and 6 transporters control iron release from the chloroplast. DOI: 10.1105/tpc.112.107672 ; PMID: 23512854
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Gene Resources
- UniProt: A0A1P8BD20
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BD20
- EnsemblPlants: AT5G41000.2
- Gramene: AT5G41000.2
- ExpressionAtlas: AT5G41000
- InterPro: IPR004813, IPR045035
- PANTHER: PTHR31645, PTHR31645:SF63
- SWISS-MODEL: A0A1P8BD20
Sequences
cDNA Sequence
- >AT5G41000.2
AACTACCATTTCCTTCTCCAATGGAGTTCTTCTCTGAGAGTGAGAGGAATCACTGAAAAAATAATACTGACCATTTCCCAAAAAGTTATGTACTTATTCTGACGAAATCTGCAGGAAATTCTCAATTTTTTTAAAAGAAGTAGCTTTTTGGAGTTATGGAGACGGAGATTCCTAGGTCAACGGAGATATCAGAGACATTGTTGTTACCAGAAACGAATCTAGATCACGGTGAATATGTACCCGAGTGGAAGGAACAGATCACGATTCGAGGCTTGATCTCTAGCGCCTTGTTAGGGATTTTGTTCTGTATCATTACCCATAAGCTCAATCTAACAATCGGAATCATTCCTTCGCTTAATGTAGCTGCTGGTCTTCTCGGCTTCTTCTTCATCAAGTCGTGGACTGGGTTCTTGTCTAAATTAGGGTTTTTATCTAAACCCTTTACTAAGCAAGAGAACACTGTTATTCAGACTTGCGTTGTCTCCTGCTACGGCCTTGCTTATAGCGGAGGATTTGGTTCGTATTTGATAGCTATGGATGAAAGGACATATAAGCTCATTGGTTCTGATTATCCTGGAAACAATCCTGAAGATGTTATAAATCCTGGATTGTGGTGGATGACTGGCTTTTTATTTGTAGTTAGCTTCCTCGGTCTCTTCTGTCTCGTTCCACTTCGCAAGGTGATGATTTTGGATTACAAGCTTACGTATCCCAGTGGAACCGCTACAGCAATGTTGATTAACAGTTTCCACAACAATACTGGAGCTGAGCTTGCAGGAAAACAAGTCAAATGTCTTGGGAAATACCTGAGCCTTAGCTTAGTTTGGAGTTGCTTCAAGTGGTTCTTTAGTGGTATTGGAGGTGCATGTGGGTTTGATCACTTTCCCACACTTGGTTTGACTCTATTCAAGAACACGTTTTACTTTGATTTCAGTCCTACTTTTATTGGATGTGGCATGATATGTCCCCATTTGGTGAACTGTTCGGTTCTTCTTGGTGCTATCATCTCTTGGGGTTTTCTCTGGCCATTTATATCACAGCATGCTGGGGACTGGTATCCAGCTGACCTTAAAGCCAACGATTTCAAAGGTCTCTATGGATATAAGGAAATCTGCAACAAAAGCTCCAGACAACACAACCTACCTGTCTTTACCGACATTTTAGATAAAAGTAAGACCTCAGTATTAATGCGGGAGAAGAAGAAAAGAGATATCATATTTCTCAAGGACCGTATACCCCTCGAGTTTGCGGTTTCTGGTTATGTGGGTCTTGCAGCTATTTCAACCGCTATAATCCCGTTGATATTCCCACCATTGAAATGGTACTTTGTCCTCTGTTCATACTTAGTTGCCCCGGGTCTTGCTTTTTGCAATTCTTATGGAGCCGGGCTCACAGATATGAGCATGCCTTCAACCTACGGAAAGACTGGTCTTTTCATCGTTGCTTCAATTGTAGGAAATAATGGTGGAGTCATTGCCGGTTTAGCAGCATGTGGCATTATGATGTCAATCGTCTCAACTGCAGCGGATCTCATGCAGGATTTTAAAACAGGTTACCTCACACTATCATCTGCAAAATCCATGTTTGTAACTCAGCTTTTGGGTACAGCAATGGGTTGCATAATCGCTCCTCTCACGTTCTGGCTGTTTTGGACTGCTTTTGATATTGGAGATCCTGATGGTCTATACAAAGCACCTTACGCGGTCATCTACCGCGAAATGGCTATTCTCGGGGTCGAAGGCTTTGCCAAACTGCCCAAACACTGTTTGGCACTTTGTTGTGGATTCTTCATCGCTGCTCTGATTGTAAATCTAATTAGAGACATGACACCACCAAAGATCTCTAAGTTGATACCACTTCCAATGGCAATGGCTGGTCCATTCTACATAGGAGCTTACTTCGCCATCGACATGTTCGTAGGAACCGTGATAATGCTCGTATGGGAACGGATGAATAAGAAAGACGCAGATGATTACTCGGGTGCAGTAGCTTCAGGTCTGATCTGCGGAGATGGAATTTGGACCATCCCATCCGCAATTCTTTCTATATTAAGAATCAATCCACCCATTTGTATGTACTTTAGACCATCCTAGACATTGTTATCATGTTAAAAATTTGTTGCATTATGGCAGATAATAGAGTTTTTATATCTCACTCTAGAACACAAAGTGCCAATAGCAACAAGTATGTGGCATAAAGTCAAACAGACAAGGTTGACCAACGAAA - >AT5G41000.3
AACTACCATTTCCTTCTCCAATGGAGTTCTTCTCTGAGAGTGAGAGGAATCACTGAAAAAATAATACTGACCATTTCCCAAAAAGTTATGTACTTATTCTGACGAAATCTGCAGGAAATTCTCAATTTTTTTAAAAGAAGTAGCTTTTTGGAGTTATGGAGACGGAGATTCCTAGGTCAACGGAGATATCAGAGACATTGTTGTTACCAGAAACGAATCTAGATCACGGTGAATATGTACCCGAGTGGAAGGAACAGATCACGATTCGAGGCTTGATCTCTAGCGCCTTGTTAGGGATTTTGTTCTGTATCATTACCCATAAGCTCAATCTAACAATCGGAATCATTCCTTCGCTTAATGTAGCTGCTGGTCTTCTCGGCTTCTTCTTCATCAAGTCGTGGACTGGGTTCTTGTCTAAATTAGGGTTTTTATCTAAACCCTTTACTAAGCAAGAGAACACTGTTATTCAGACTTGCGTTGTCTCCTGCTACGGCCTTGCTTATAGCGGAGGATTTGGTTCGTATTTGATAGCTATGGATGAAAGGACATATAAGCTCATTGGTTCTGATTATCCTGGAAACAATCCTGAAGATGTTATAAATCCTGGATTGTGGTGGATGACTGGCTTTTTATTTGTAGTTAGCTTCCTCGGTCTCTTCTGTCTCGTTCCACTTCGCAAGGTGATGATTTTGGATTACAAGCTTACGTATCCCAGTGGAACCGCTACAGCAATGTTGATTAACAGTTTCCACAACAATACTGGAGCTGAGCTTGCAGGAAAACAAGTCAAATGTCTTGGGAAATACCTGAGCCTTAGCTTAGTTTGGAGTTGCTTCAAGTGGTTCTTTAGTGGTATTGGAGGTGCATGTGGGTTTGATCACTTTCCCACACTTGGTTTGACTCTATTCAAGAACACGTTTTACTTTGATTTCAGTCCTACTTTTATTGGATGTGGCATGATATGTCCCCATTTGGTGAACTGTTCGGTTCTTCTTGGTGCTATCATCTCTTGGGGTTTTCTCTGGCCATTTATATCACAGCATGCTGGGGACTGGTATCCAGCTGACCTTAAAGCCAACGATTTCAAAGGTCTCTATGGATATAAGGAAATCTGCAACAAAAGCTCCAGACAACACAACCTACCTGTCTTTACCGACATTTTAGATAAAAGTAAGACCTCAGTATTAATGCGGGAGAAGAAGAAAAGAGATATCATATTTCTCAAGGACCGTATACCCCTCGAGTTTGCGGTTTCTGGTTATGTGGGTCTTGCAGCTATTTCAACCGCTATAATCCCGTTGATATTCCCACCATTGAAATGGTACTTTGTCCTCTGTTCATACTTAGTTGCCCCGGGTCTTGCTTTTTGCAATTCTTATGGAGCCGGGCTCACAGATATGAGCATGCCTTCAACCTACGGAAAGACTGGTCTTTTCATCGTTGCTTCAATTGTAGGAAATAATGGTGGAGTCATTGCCGGTTTAGCAGCATGTGGCATTATGATGTCAATCGTCTCAACTGCAGCGGATCTCATGCAGGATTTTAAAACAGGTTACCTCACACTATCATCTGCAAAATCCATGTTTGTAACTCAGCTTTTGGGTACAGCAATGGGTTGCATAATCGCTCCTCTCACGTTCTGGCTGTTTTGGACTGCTTTTGATATTGGAGATCCTGATGGTCTATACAAAGCACCTTACGCGGTCATCTACCGCGAAATGGCTATTCTCGGGGTCGAAGGCTTTGCCAAACTGCCCAAACACTGTTTGGCACTTTGTTGTGGATTCTTCATCGCTGCTCTGATTGTAAATCTAATTAGAGACATGACACCACCAAAGATCTCTAAGTTGATACCACTTCCAATGGCAATGGCTGGTCCATTCTACATAGGAGCTTACTTCGCCATCGACATGTTCGTAGGAACCGTGATAATGCTCGTATGGGAACGGATGAATAAGAAAGACGCAGATGATTACTCGGGTGCAGTAGCTTCAGGTCTGATCTGCGGAGATGGAATTTGGACCATCCCATCCGCAATTCTTTCTATATTAAGAATCAATCCACCCATTTGTATGTACTTTAGACCATCCTAGACATTGTTATCATGTTAAAAATTTGTTGCATTATGGCAGATAATAGAGTTTTTATATCTCACTCTAGAACACAAAGTGCCAATAGCAACAAGTATGTGGCATAAAGTCAAACAGACAAGGTTGACCAACGAAA - >AT5G41000.1
AACTACCATTTCCTTCTCCAATGGAGTTCTTCTCTGAGAGTGAGAGGAATCACTGAAAAAATAATACTGACCATTTCCCAAAAAGTTATGTACTTATTCTGACGAAATCTGCAGGAAATTCTCAATTTTTTTAAAAGAAGTAGCTTTTTGGAGTTATGGAGACGGAGATTCCTAGGTCAACGGAGATATCAGAGACATTGTTGTTACCAGAAACGAATCTAGATCACGGTGAATATGTACCCGAGTGGAAGGAACAGATCACGATTCGAGGCTTGATCTCTAGCGCCTTGTTAGGGATTTTGTTCTGTATCATTACCCATAAGCTCAATCTAACAATCGGAATCATTCCTTCGCTTAATGTAGCTGCTGGTCTTCTCGGCTTCTTCTTCATCAAGTCGTGGACTGGGTTCTTGTCTAAATTAGGGTTTTTATCTAAACCCTTTACTAAGCAAGAGAACACTGTTATTCAGACTTGCGTTGTCTCCTGCTACGGCCTTGCTTATAGCGGAGGATTTGGTTCGTATTTGATAGCTATGGATGAAAGGACATATAAGCTCATTGGTTCTGATTATCCTGGAAACAATCCTGAAGATGTTATAAATCCTGGATTGTGGTGGATGACTGGCTTTTTATTTGTAGTTAGCTTCCTCGGTCTCTTCTGTCTCGTTCCACTTCGCAAGGTGATGATTTTGGATTACAAGCTTACGTATCCCAGTGGAACCGCTACAGCAATGTTGATTAACAGTTTCCACAACAATACTGGAGCTGAGCTTGCAGGAAAACAAGTCAAATGTCTTGGGAAATACCTGAGCCTTAGCTTAGTTTGGAGTTGCTTCAAGTGGTTCTTTAGTGGTATTGGAGGTGCATGTGGGTTTGATCACTTTCCCACACTTGGTTTGACTCTATTCAAGAACACGTTTTACTTTGATTTCAGTCCTACTTTTATTGGATGTGGCATGATATGTCCCCATTTGGTGAACTGTTCGGTTCTTCTTGGTGCTATCATCTCTTGGGGTTTTCTCTGGCCATTTATATCACAGCATGCTGGGGACTGGTATCCAGCTGACCTTAAAGCCAACGATTTCAAAGGTCTCTATGGATATAAGGAAATCTGCAACAAAAGCTCCAGACAACACAACCTACCTGTCTTTACCGACATTTTAGATAAAAGTAAGACCTCAGTATTAATGCGGGAGAAGAAGAAAAGAGATATCATATTTCTCAAGGACCGTATACCCCTCGAGTTTGCGGTTTCTGGTTATGTGGGTCTTGCAGCTATTTCAACCGCTATAATCCCGTTGATATTCCCACCATTGAAATGGTACTTTGTCCTCTGTTCATACTTAGTTGCCCCGGGTCTTGCTTTTTGCAATTCTTATGGAGCCGGGCTCACAGATATGAGCATGCCTTCAACCTACGGAAAGACTGGTCTTTTCATCGTTGCTTCAATTGTAGGAAATAATGGTGGAGTCATTGCCGGTTTAGCAGCATGTGGCATTATGATGTCAATCGTCTCAACTGCAGCGGATCTCATGCAGGATTTTAAAACAGGTTACCTCACACTATCATCTGCAAAATCCATGTTTGTAACTCAGCTTTTGGGTACAGCAATGGGTTGCATAATCGCTCCTCTCACGTTCTGGCTGTTTTGGACTGCTTTTGATATTGGAGATCCTGATGGTCTATACAAAGCACCTTACGCGGTCATCTACCGCGAAATGGCTATTCTCGGGGTCGAAGGCTTTGCCAAACTGCCCAAACACTGTTTGGCACTTTGTTGTGGATTCTTCATCGCTGCTCTGATTGTAAATCTAATTAGAGACATGACACCACCAAAGATCTCTAAGTTGATACCACTTCCAATGGCAATGGCTGGTCCATTCTACATAGGAGCTTACTTCGCCATCGACATGTTCGTAGGAACCGTGATAATGCTCGTATGGGAACGGATGAATAAGAAAGACGCAGATGATTACTCGGGTGCAGTAGCTTCAGGTCTGATCTGCGGAGATGGAATTTGGACCATCCCATCCGCAATTCTTTCTATATTAAGAATCAATCCACCCATTTGTATGTACTTTAGACCATCCTAGACATTGTTATCATGTTAAAAATTTGTTGCATTATGGCAGATAATAGAGTTTTTATATCTCACTCTAGAACACAAAGTGCCAATAGCAACAAGTATGTGGCATAAAGTCAAACAGACAAGGTTGACCAACGAAA
CDS Sequence
Protein Sequence