Information report for AT5G40890
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Localization of a putative ClC chloride channel in spinach chloroplasts. DOI: 10.1016/j.febslet.2005.08.005 ; PMID: 16115625
- The phs1-3 mutation in a putative dual-specificity protein tyrosine phosphatase gene provokes hypersensitive responses to abscisic acid in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02823.x ; PMID: 16889651
- Overexpression of soybean ubiquitin-conjugating enzyme gene GmUBC2 confers enhanced drought and salt tolerance through modulating abiotic stress-responsive gene expression in Arabidopsis. DOI: 10.1007/s11103-009-9575-x ; PMID: 19941154
- The chloride channel family gene CLCd negatively regulates pathogen-associated molecular pattern (PAMP)-triggered immunity in Arabidopsis. DOI: 10.1093/jxb/ert484 ; PMID: 24449384
- Overexpression of PP2A-C5 that encodes the catalytic subunit 5 of protein phosphatase 2A in Arabidopsis confers better root and shoot development under salt conditions. DOI: 10.1111/pce.12837 ; PMID: 27676158
- Full-length transcriptome sequences of ephemeral plant Arabidopsis pumila provides insight into gene expression dynamics during continuous salt stress. DOI: 10.1186/s12864-018-5106-y ; PMID: 30261913
- Vacuolar nitrate efflux requires multiple functional redundant nitrate transporter in Arabidopsis thaliana. DOI: 10.3389/fpls.2022.926809 ; PMID: 35937356
Gene Resources
- UniProt: A0A5S9Y9U9
- EMBL: CACSHJ010000096
- AlphaFoldDB: A0A5S9Y9U9
- EnsemblPlants: AT5G40890.1
- Gramene: AT5G40890.1
- KEGG: ath:AT5G40890
- ExpressionAtlas: AT5G40890
- InterPro: IPR000644, IPR001807, IPR002251
- PANTHER: PTHR11689, PTHR11689:SF67
- SUPFAM: SSF54631, SSF81340
- PROSITE: PS51371
- Gene3D: 1.10.3080.10, 3.10.580.10
- OrthoDB: A0A5S9Y9U9
- SWISS-MODEL: A0A5S9Y9U9
- Conserved Domain Database: cd03685, cd04591
Sequences
cDNA Sequence
- >AT5G40890.1
GATGACAACCTTTATTTTAGGTTATATTATTTAAGTAGGCAATATAATATAGACCAATGATTGTCTTATCTTTAGTGAGAATAGCATATGGTACCCATCCACCCACTGTGACTCCTCCTCACAACAAATAACATTTAAATTAAATGTTATGTTTGTATCACCATACATATAATGGTGTATATTGATGCATGCATGTATCATATGTAGAGAGAGATCTATAAAGCTTCATAAAAGTGTTTCTCTAGAAAAAACGACAAAATTCGCAGAGAAAATCCAAACCAAAAGTAGTTTTGTAACAGAGAGATAGATAGAAAGCTCTTGAAGATCTAACCAAAATCTACTTTTGTTCTTCTTCTTCTTCTTTTCATAAATTTTCGGAGTGGTCCTATTTATTGTTTCTTGGATCATTAGAGAGACAGCTATCGATGGATGAAGATGGAAACTTGCAGATTAGTAATAGTAATTACAATGGAGAAGAAGAAGGAGAAGATCCAGAGAACAACACTTTGAATCAACCACTGCTTAAGAGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATCGAGAGTTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCAAAAGCACAAGTGTTTCAATACATATTCTTAAAATGGACATTAGCTTGTCTTGTTGGTCTCTTCACTGGTCTTATCGCTACTCTCATCAACCTTGCTGTCGAAAACATCGCCGGTTACAAACTTCTCGCCGTCGGCTACTACATTGCTCAAGATAGGTTTTGGACAGGTCTGATGGTCTTTACGGGGGCGAATTTGGGTCTGACTTTGGTGGCGACAGTACTTGTTGTTTACTTTGCTCCTACGGCGGCTGGTCCGGGGATCCCTGAGATTAAAGCTTACCTTAATGGCATTGACACTCCCAATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGAGCGGTTGCAGCTGGACTTGATCTTGGTAAAGAAGGGCCATTGGTTCATATTGGAAGTTGCATAGCTTCTTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAATGGAGATGGCTTCGTTACTTCAACAACGATAGAGATCGAAGAGATCTTATTACATGTGGATCTGCCTCTGGAGTATGTGCTGCTTTCAGGTCACCAGTAGGAGGAGTACTTTTCGCTCTTGAGGAAGTCGCTACGTGGTGGAGAAGCGCTCTCTTGTGGAGAACATTCTTCAGTACAGCCGTTGTGGTGGTTGTATTAAGAGCGTTCATTGAGATTTGTAACTCCGGGAAATGCGGACTTTTCGGCTCAGGAGGACTCATTATGTTCGATGTGAGTCATGTAGAGGTTAGGTACCACGCAGCAGATATAATCCCAGTCACATTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCATCTTCTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACCAGAAGGGAAAGATTCATAAGGTGCTTCTAAGTCTTGGGGTATCTCTATTCACATCAGTTTGCTTGTTCGGTCTTCCTTTCTTAGCGGAATGCAAGCCTTGTGATCCTTCTATAGACGAGATATGTCCAACAAACGGAAGATCAGGAAATTTCAAGCAATTCAACTGTCCAAATGGTTATTACAACGATCTATCCACTCTGCTTCTCACAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAATGAGTTTGGCATGGTTTCTCTCTGGATATTCTTTGGCCTCTACTGCATTTTGGGTCTTATAACATTCGGTATAGCGACACCGTCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGCATACGGTAGGATGCTAGGCACAGCAATGGGGTCTTACACAAACATAGATCAAGGGCTTTACGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACTGTTTCACTCTGTGTTATATTTCTGGAACTCACCAACAACCTTCTTTTGTTGCCCATTACAATGTTTGTGCTTCTGATAGCTAAAACAGTAGGTGACAGCTTCAATCTAAGTATCTACGAGATCATTCTCCATCTTAAGGGCTTACCTTTCTTGGAAGCAAATCCAGAGCCGTGGATGAGGAATCTCACTGTAGGTGAGCTTAACGACGCTAAGCCTCCGGTTGTAACACTTAACGGAGTAGAAAAAGTGGCAAATATAGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGGAGCAGATCAAAACACTGGCACAGAGCTCCATGGTCTGATCCTAAGAGCTCACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGAATGAGAAAAGGAGAACAGAAGAGTGGGAAGTTAGGGAAAAGTTCACACCGGTTGAATTAGCTGAGAGAGAAGATAACTTCGATGATGTTGCAATCACAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCCTTTGACCAACACTACACCTTACACAGTGGTGCAAAGTATGTCAGTGGCTAAAGCTTTGGTTCTGTTCCGGTCAGTGGGTCTCAGACATTTACTGGTGGTTCCCAAGATTCAAGCTTCAGGGATGTCACCTGTGATAGGGATCTTAACAAGGCAAGATCTCAGGGCTTATAACATTCTACAAGCATTTCCTCACTTGGATAAACACAAAAGTGGAAAAGCTAGATGAATAAGCCAAAATGCAAAGAGCGTTCACTATTATTTGGTTTGTGTGATTCGTGTGTCTTTCCACATTCTTAGTTGATATATATTCTGTCCAGTTTTGCTTGCATTCTTCCTTCAAGACCAAAAACAAATTATACCATTTGGTAGATTTGTGTTTTCTACTTGTAAATCTCCTTTTTTTTCCCCACGTTTTCAGTTTCAAAAGAAGAAGAATAAGAAATTTGAATACAGAACAAAACTTTGAAGCTTCCATGGAGTTCACAAATCTTTTAAGGAATTGTGTTAAATAAACATCTTTCTATGAGAGAACGGATATGAAAATATTACTTTCTT - >AT5G40890.2
GATGACAACCTTTATTTTAGGTTATATTATTTAAGTAGGCAATATAATATAGACCAATGATTGTCTTATCTTTAGTGAGAATAGCATATGGTACCCATCCACCCACTGTGACTCCTCCTCACAACAAATAACATTTAAATTAAATGTTATGTTTGTATCACCATACATATAATGGTGTATATTGATGCATGCATGTATCATATGTAGAGAGAGATCTATAAAGCTTCATAAAAGTGTTTCTCTAGAAAAAACGACAAAATTCGCAGAGAAAATCCAAACCAAAAGTAGTTTTGTAACAGAGAGATAGATAGAAAGCTCTTGAAGATCTAACCAAAATCTACTTTTGTTCTTCTTCTTCTTCTTTTCATAAATTTTCGGAGTGGTCCTATTTATTGTTTCTTGGATCATTAGAGAGACAGCTATCGATGGATGAAGATGGAAACTTGCAGATTAGTAATAGTAATTACAATGGAGAAGAAGAAGGAGAAGATCCAGAGAACAACACTTTGAATCAACCACTGCTTAAGAGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATCGAGAGTTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCAAAAGCACAAGTGTTTCAATACATATTCTTAAAATGGACATTAGCTTGTCTTGTTGGTCTCTTCACTGGTCTTATCGCTACTCTCATCAACCTTGCTGTCGAAAACATCGCCGGTTACAAACTTCTCGCCGTCGGCTACTACATTGCTCAAGATAGGTTTTGGACAGGTCTGATGGTCTTTACGGGGGCGAATTTGGGTCTGACTTTGGTGGCGACAGTACTTGTTGTTTACTTTGCTCCTACGGCGGCTGGTCCGGGGATCCCTGAGATTAAAGCTTACCTTAATGGCATTGACACTCCCAATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGAGCGGTTGCAGCTGGACTTGATCTTGGTAAAGAAGGGCCATTGGTTCATATTGGAAGTTGCATAGCTTCTTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAATGGAGATGGCTTCGTTACTTCAACAACGATAGAGATCGAAGAGATCTTATTACATGTGGATCTGCCTCTGGAGTATGTGCTGCTTTCAGGTCACCAGTAGGAGGAGTACTTTTCGCTCTTGAGGAAGTCGCTACGTGGTGGAGAAGCGCTCTCTTGTGGAGAACATTCTTCAGTACAGCCGTTGTGGTGGTTGTATTAAGAGCGTTCATTGAGATTTGTAACTCCGGGAAATGCGGACTTTTCGGCTCAGGAGGACTCATTATGTTCGATGTGAGTCATGTAGAGGTTAGGTACCACGCAGCAGATATAATCCCAGTCACATTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCATCTTCTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACCAGAAGGGAAAGATTCATAAGGTGCTTCTAAGTCTTGGGGTATCTCTATTCACATCAGTTTGCTTGTTCGGTCTTCCTTTCTTAGCGGAATGCAAGCCTTGTGATCCTTCTATAGACGAGATATGTCCAACAAACGGAAGATCAGGAAATTTCAAGCAATTCAACTGTCCAAATGGTTATTACAACGATCTATCCACTCTGCTTCTCACAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAATGAGTTTGGCATGGTTTCTCTCTGGATATTCTTTGGCCTCTACTGCATTTTGGGTCTTATAACATTCGGTATAGCGACACCGTCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGCATACGGTAGGATGCTAGGCACAGCAATGGGGTCTTACACAAACATAGATCAAGGGCTTTACGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACTGTTTCACTCTGTGTTATATTTCTGGAACTCACCAACAACCTTCTTTTGTTGCCCATTACAATGTTTGTGCTTCTGATAGCTAAAACAGTAGGTGACAGCTTCAATCTAAGTATCTACGAGATCATTCTCCATCTTAAGGGCTTACCTTTCTTGGAAGCAAATCCAGAGCCGTGGATGAGGAATCTCACTGTAGGTGAGCTTAACGACGCTAAGCCTCCGGTTGTAACACTTAACGGAGTAGAAAAAGTGGCAAATATAGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGGAGCAGATCAAAACACTGGCACAGAGCTCCATGGTCTGATCCTAAGAGCTCACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGAATGAGAAAAGGAGAACAGAAGAGTGGGAAGTTAGGGAAAAGTTCACACCGGTTGAATTAGCTGAGAGAGAAGATAACTTCGATGATGTTGCAATCACAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCCTTTGACCAACACTACACCTTACACAGTGGTGCAAAGTATGTCAGTGGCTAAAGCTTTGGTTCTGTTCCGGTCAGTGGGTCTCAGACATTTACTGGTGGTTCCCAAGATTCAAGCTTCAGGGATGTCACCTGTGATAGGGATCTTAACAAGGCAAGATCTCAGGGCTTATAACATTCTACAAGCATTTCCTCACTTGGATAAACACAAAAGTGGAAAAGCTAGATGAATAAGCCAAAATGCAAAGAGCGTTCACTATTATTTGGTTTGTGTGATTCGTGTGTCTTTCCACATTCTTAGTTGATATATATTCTGTCCAGTTTTGCTTGCATTCTTCCTTCAAGACCAAAAACAAATTATACCATTTGGTAGATTTGTGTTTTCTACTTGTAAATCTCCTTTTTTTTCCCCACGTTTTCAGTTTCAAAAGAAGAAGAATAAGAAATTTGAATACAGAACAAAACTTTGAAGCTTCCATGGAGTTCACAAATCTTTTAAGGAATTGTGTTAAATAAACATCTTTCTATGAGAGAACGGATATGAAAATATTACTTTCTT
CDS Sequence
Protein Sequence