Gene Details:
- Gene ID: AT5G40890
- Gene Symbol: ATCLC-A, ATCLCA, CLC-A, CLC-A, CLCA
- Gene Name: chloride channel A, chloride channel A, CHLORIDE CHANNEL-A, CHLORIDE CHANNEL A
- Description: chloride channel A;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
Literature:
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Localization of a putative ClC chloride channel in spinach chloroplasts. DOI: 10.1016/j.febslet.2005.08.005 ; PMID: 16115625
- The phs1-3 mutation in a putative dual-specificity protein tyrosine phosphatase gene provokes hypersensitive responses to abscisic acid in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02823.x ; PMID: 16889651
- Overexpression of soybean ubiquitin-conjugating enzyme gene GmUBC2 confers enhanced drought and salt tolerance through modulating abiotic stress-responsive gene expression in Arabidopsis. DOI: 10.1007/s11103-009-9575-x ; PMID: 19941154
- The chloride channel family gene CLCd negatively regulates pathogen-associated molecular pattern (PAMP)-triggered immunity in Arabidopsis. DOI: 10.1093/jxb/ert484 ; PMID: 24449384
- Overexpression of PP2A-C5 that encodes the catalytic subunit 5 of protein phosphatase 2A in Arabidopsis confers better root and shoot development under salt conditions. DOI: 10.1111/pce.12837 ; PMID: 27676158
- Full-length transcriptome sequences of ephemeral plant Arabidopsis pumila provides insight into gene expression dynamics during continuous salt stress. DOI: 10.1186/s12864-018-5106-y ; PMID: 30261913
- Vacuolar nitrate efflux requires multiple functional redundant nitrate transporter in Arabidopsis thaliana. DOI: 10.3389/fpls.2022.926809 ; PMID: 35937356
Sequences:
cDNA Sequence
- >AT5G40890.1
GATGACAACCTTTATTTTAGGTTATATTATTTAAGTAGGCAATATAATATAGACCAATGATTGTCTTATCTTTAGTGAGAATAGCATATGGTACCCATCCACCCACTGTGACTCCTCCTCACAACAAATAACATTTAAATTAAATGTTATGTTTGTATCACCATACATATAATGGTGTATATTGATGCATGCATGTATCATATGTAGAGAGAGATCTATAAAGCTTCATAAAAGTGTTTCTCTAGAAAAAACGACAAAATTCGCAGAGAAAATCCAAACCAAAAGTAGTTTTGTAACAGAGAGATAGATAGAAAGCTCTTGAAGATCTAACCAAAATCTACTTTTGTTCTTCTTCTTCTTCTTTTCATAAATTTTCGGAGTGGTCCTATTTATTGTTTCTTGGATCATTAGAGAGACAGCTATCGATGGATGAAGATGGAAACTTGCAGATTAGTAATAGTAATTACAATGGAGAAGAAGAAGGAGAAGATCCAGAGAACAACACTTTGAATCAACCACTGCTTAAGAGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATCGAGAGTTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCAAAAGCACAAGTGTTTCAATACATATTCTTAAAATGGACATTAGCTTGTCTTGTTGGTCTCTTCACTGGTCTTATCGCTACTCTCATCAACCTTGCTGTCGAAAACATCGCCGGTTACAAACTTCTCGCCGTCGGCTACTACATTGCTCAAGATAGGTTTTGGACAGGTCTGATGGTCTTTACGGGGGCGAATTTGGGTCTGACTTTGGTGGCGACAGTACTTGTTGTTTACTTTGCTCCTACGGCGGCTGGTCCGGGGATCCCTGAGATTAAAGCTTACCTTAATGGCATTGACACTCCCAATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGAGCGGTTGCAGCTGGACTTGATCTTGGTAAAGAAGGGCCATTGGTTCATATTGGAAGTTGCATAGCTTCTTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAATGGAGATGGCTTCGTTACTTCAACAACGATAGAGATCGAAGAGATCTTATTACATGTGGATCTGCCTCTGGAGTATGTGCTGCTTTCAGGTCACCAGTAGGAGGAGTACTTTTCGCTCTTGAGGAAGTCGCTACGTGGTGGAGAAGCGCTCTCTTGTGGAGAACATTCTTCAGTACAGCCGTTGTGGTGGTTGTATTAAGAGCGTTCATTGAGATTTGTAACTCCGGGAAATGCGGACTTTTCGGCTCAGGAGGACTCATTATGTTCGATGTGAGTCATGTAGAGGTTAGGTACCACGCAGCAGATATAATCCCAGTCACATTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCATCTTCTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACCAGAAGGGAAAGATTCATAAGGTGCTTCTAAGTCTTGGGGTATCTCTATTCACATCAGTTTGCTTGTTCGGTCTTCCTTTCTTAGCGGAATGCAAGCCTTGTGATCCTTCTATAGACGAGATATGTCCAACAAACGGAAGATCAGGAAATTTCAAGCAATTCAACTGTCCAAATGGTTATTACAACGATCTATCCACTCTGCTTCTCACAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAATGAGTTTGGCATGGTTTCTCTCTGGATATTCTTTGGCCTCTACTGCATTTTGGGTCTTATAACATTCGGTATAGCGACACCGTCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGCATACGGTAGGATGCTAGGCACAGCAATGGGGTCTTACACAAACATAGATCAAGGGCTTTACGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACTGTTTCACTCTGTGTTATATTTCTGGAACTCACCAACAACCTTCTTTTGTTGCCCATTACAATGTTTGTGCTTCTGATAGCTAAAACAGTAGGTGACAGCTTCAATCTAAGTATCTACGAGATCATTCTCCATCTTAAGGGCTTACCTTTCTTGGAAGCAAATCCAGAGCCGTGGATGAGGAATCTCACTGTAGGTGAGCTTAACGACGCTAAGCCTCCGGTTGTAACACTTAACGGAGTAGAAAAAGTGGCAAATATAGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGGAGCAGATCAAAACACTGGCACAGAGCTCCATGGTCTGATCCTAAGAGCTCACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGAATGAGAAAAGGAGAACAGAAGAGTGGGAAGTTAGGGAAAAGTTCACACCGGTTGAATTAGCTGAGAGAGAAGATAACTTCGATGATGTTGCAATCACAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCCTTTGACCAACACTACACCTTACACAGTGGTGCAAAGTATGTCAGTGGCTAAAGCTTTGGTTCTGTTCCGGTCAGTGGGTCTCAGACATTTACTGGTGGTTCCCAAGATTCAAGCTTCAGGGATGTCACCTGTGATAGGGATCTTAACAAGGCAAGATCTCAGGGCTTATAACATTCTACAAGCATTTCCTCACTTGGATAAACACAAAAGTGGAAAAGCTAGATGAATAAGCCAAAATGCAAAGAGCGTTCACTATTATTTGGTTTGTGTGATTCGTGTGTCTTTCCACATTCTTAGTTGATATATATTCTGTCCAGTTTTGCTTGCATTCTTCCTTCAAGACCAAAAACAAATTATACCATTTGGTAGATTTGTGTTTTCTACTTGTAAATCTCCTTTTTTTTCCCCACGTTTTCAGTTTCAAAAGAAGAAGAATAAGAAATTTGAATACAGAACAAAACTTTGAAGCTTCCATGGAGTTCACAAATCTTTTAAGGAATTGTGTTAAATAAACATCTTTCTATGAGAGAACGGATATGAAAATATTACTTTCTT - >AT5G40890.2
GATGACAACCTTTATTTTAGGTTATATTATTTAAGTAGGCAATATAATATAGACCAATGATTGTCTTATCTTTAGTGAGAATAGCATATGGTACCCATCCACCCACTGTGACTCCTCCTCACAACAAATAACATTTAAATTAAATGTTATGTTTGTATCACCATACATATAATGGTGTATATTGATGCATGCATGTATCATATGTAGAGAGAGATCTATAAAGCTTCATAAAAGTGTTTCTCTAGAAAAAACGACAAAATTCGCAGAGAAAATCCAAACCAAAAGTAGTTTTGTAACAGAGAGATAGATAGAAAGCTCTTGAAGATCTAACCAAAATCTACTTTTGTTCTTCTTCTTCTTCTTTTCATAAATTTTCGGAGTGGTCCTATTTATTGTTTCTTGGATCATTAGAGAGACAGCTATCGATGGATGAAGATGGAAACTTGCAGATTAGTAATAGTAATTACAATGGAGAAGAAGAAGGAGAAGATCCAGAGAACAACACTTTGAATCAACCACTGCTTAAGAGACATAGAACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATCGAGAGTTTAGATTATGAAATAAACGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCAAAAGCACAAGTGTTTCAATACATATTCTTAAAATGGACATTAGCTTGTCTTGTTGGTCTCTTCACTGGTCTTATCGCTACTCTCATCAACCTTGCTGTCGAAAACATCGCCGGTTACAAACTTCTCGCCGTCGGCTACTACATTGCTCAAGATAGGTTTTGGACAGGTCTGATGGTCTTTACGGGGGCGAATTTGGGTCTGACTTTGGTGGCGACAGTACTTGTTGTTTACTTTGCTCCTACGGCGGCTGGTCCGGGGATCCCTGAGATTAAAGCTTACCTTAATGGCATTGACACTCCCAATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGAGCGGTTGCAGCTGGACTTGATCTTGGTAAAGAAGGGCCATTGGTTCATATTGGAAGTTGCATAGCTTCTTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAATGGAGATGGCTTCGTTACTTCAACAACGATAGAGATCGAAGAGATCTTATTACATGTGGATCTGCCTCTGGAGTATGTGCTGCTTTCAGGTCACCAGTAGGAGGAGTACTTTTCGCTCTTGAGGAAGTCGCTACGTGGTGGAGAAGCGCTCTCTTGTGGAGAACATTCTTCAGTACAGCCGTTGTGGTGGTTGTATTAAGAGCGTTCATTGAGATTTGTAACTCCGGGAAATGCGGACTTTTCGGCTCAGGAGGACTCATTATGTTCGATGTGAGTCATGTAGAGGTTAGGTACCACGCAGCAGATATAATCCCAGTCACATTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCATCTTCTGCATAAAGTTCTCCGGCTTTACAATCTCATCAACCAGAAGGGAAAGATTCATAAGGTGCTTCTAAGTCTTGGGGTATCTCTATTCACATCAGTTTGCTTGTTCGGTCTTCCTTTCTTAGCGGAATGCAAGCCTTGTGATCCTTCTATAGACGAGATATGTCCAACAAACGGAAGATCAGGAAATTTCAAGCAATTCAACTGTCCAAATGGTTATTACAACGATCTATCCACTCTGCTTCTCACAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAATGAGTTTGGCATGGTTTCTCTCTGGATATTCTTTGGCCTCTACTGCATTTTGGGTCTTATAACATTCGGTATAGCGACACCGTCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGCATACGGTAGGATGCTAGGCACAGCAATGGGGTCTTACACAAACATAGATCAAGGGCTTTACGCGGTTCTTGGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACTGTTTCACTCTGTGTTATATTTCTGGAACTCACCAACAACCTTCTTTTGTTGCCCATTACAATGTTTGTGCTTCTGATAGCTAAAACAGTAGGTGACAGCTTCAATCTAAGTATCTACGAGATCATTCTCCATCTTAAGGGCTTACCTTTCTTGGAAGCAAATCCAGAGCCGTGGATGAGGAATCTCACTGTAGGTGAGCTTAACGACGCTAAGCCTCCGGTTGTAACACTTAACGGAGTAGAAAAAGTGGCAAATATAGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGGAGCAGATCAAAACACTGGCACAGAGCTCCATGGTCTGATCCTAAGAGCTCACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGAATGAGAAAAGGAGAACAGAAGAGTGGGAAGTTAGGGAAAAGTTCACACCGGTTGAATTAGCTGAGAGAGAAGATAACTTCGATGATGTTGCAATCACAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCCTTTGACCAACACTACACCTTACACAGTGGTGCAAAGTATGTCAGTGGCTAAAGCTTTGGTTCTGTTCCGGTCAGTGGGTCTCAGACATTTACTGGTGGTTCCCAAGATTCAAGCTTCAGGGATGTCACCTGTGATAGGGATCTTAACAAGGCAAGATCTCAGGGCTTATAACATTCTACAAGCATTTCCTCACTTGGATAAACACAAAAGTGGAAAAGCTAGATGAATAAGCCAAAATGCAAAGAGCGTTCACTATTATTTGGTTTGTGTGATTCGTGTGTCTTTCCACATTCTTAGTTGATATATATTCTGTCCAGTTTTGCTTGCATTCTTCCTTCAAGACCAAAAACAAATTATACCATTTGGTAGATTTGTGTTTTCTACTTGTAAATCTCCTTTTTTTTCCCCACGTTTTCAGTTTCAAAAGAAGAAGAATAAGAAATTTGAATACAGAACAAAACTTTGAAGCTTCCATGGAGTTCACAAATCTTTTAAGGAATTGTGTTAAATAAACATCTTTCTATGAGAGAACGGATATGAAAATATTACTTTCTT
CDS Sequence
Protein Sequence