Information report for AT5G40880
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Transcriptional regulation of secondary growth in Arabidopsis thaliana. DOI: 10.1093/jxb/erg304 ; PMID: 14585825
- Computational identification of 69 retroposons in Arabidopsis. DOI: 10.1104/pp.105.060244 ; PMID: 15923328
- Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit. DOI: 10.1104/pp.105.070672 ; PMID: 16500995
- Dissecting salt stress pathways. DOI: 10.1093/jxb/erj098 ; PMID: 16510518
- Expression profiling and local adaptation of Boechera holboellii populations for water use efficiency across a naturally occurring water stress gradient. DOI: 10.1111/j.1365-294X.2006.02818.x ; PMID: 16626450
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis. DOI: 10.3390/ijms22094738 ; PMID: 33947021
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
Gene Resources
- UniProt: A0A1P8BAA9
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BAA9
- EnsemblPlants: AT5G40880.2
- Gramene: AT5G40880.2
- ExpressionAtlas: AT5G40880
- InterPro: IPR000571, IPR001680, IPR015943
- PANTHER: PTHR44489, PTHR44489:SF14
- SUPFAM: SSF50978, SSF90229
- PROSITE: PS00678, PS50082, PS50103
- Gene3D: 2.130.10.10
- SWISS-MODEL: A0A1P8BAA9
Sequences
cDNA Sequence
- >AT5G40880.2
CGACTCTTGACCTTCAATTTCCTCCGTCTCTAAATTTCCTTTTCTTTTGGCTCTCTCTGCGATCGAGTTCGAAACCGTTCCCTAATCGAAGATCTAGATTCAACATACGTTTTATCTCTCAGTATGGATTACAAGGCGCCAAGGAAATACTCACACGGAAGGAATTTTGGAGTTGCGAGACAGCAAGATTTTGCAGCAGATATAGTTACGAGAAGACCTTATGCCCCGTATGACAATGGTATGAAGAAAGGTCCTAATAAGTTGTCAAGGAATCTGGTTTGGACGTCAAAAGAGTACAAATCACCAGAGGGAAACAGGCCAAGGCAGAATGCAGCCAATGGGTCAGCGAAACCACAAGTTATAGGCACAGGACATCGTGTATCAAACCAGCCGAGGAAGAATGCTGTGTATGGGCCAAGGAGCTCTTCTCTTTCAGACACCAGAGGTTGTGGGCCGAGACTCAATGGCAGTCCCAAAAAGAGTGTGTGTAATTTTTGGAAAGATGGAAACTGCAAAAAGGGCGAGAAATGCCAGTTCTTACACTCTTGGTCTTGTTTTCCTGGACTGGCCATGGTAGCTGCTCTTGAAGGACACAAGAATGATATTAAGGGAATCGCCCTTCCTCAGGGTTCAGATAAACTCTTTTCAGTCAGTGGTGATGGTACATTGCTAATTTGGGACTGCAATTCTGGTCAGTGTGTTCGATCCATCAACCTCCAGGCAGAAGCAGGGTCTCTAATTAGTGAAGGACCATGGGTTTTCCTTGGCTTGCCAAACGCTGTAAAGGCTTTTAACGTTCAAAACAGTAAAGATGTGCATCTTGAAGGGGTGGTTGGTCAGGTGCATGCAATGACTGCTGCAAACGGAATGCTTTTTGCTGGAACAAGTTCTGGTAGTATATTAGTCTGGAAAGCTACAGACTCGGAGTCTGATCCATTCAAATACTTGACATCTCTCGAGGGACATCATAGTGGTGAAGTCACTTGTTTTGTTGTTGGAGGTGAAGTGCTATACTCTGGTTCTGTCGATAAAACAATAAAGGTGTGGGATCTCAACACCTTGCAATGTAGAATGACCCTGAAGCAACATATCGGCACTGTCACTTCACTCTTATGTTGGGACAAGTGTCTGATATCGTCTTCCTTGGATGGGACCATAAAACTTTGGGCTTGTTCTGAAAATGAAAGTTTGAAAGTTGTTCAAACTCGCAAACAAGAACTGAGTGTTCATACTCTCTGTGGAATGCACGATGCAGAGGCCAAACCGATCATGTTTTGCTCTTACCAAAATGGAGCAGTTGGCATTTTCGACCTACCATCTTTTGAAGAAAGAGGAAAGATGTTCTCTACGCAGACGATCTGCACACTTACAATTGGTCCTGGAGGATTGTTATTCAGTGGAGACAAGAGTGGGAACTTGCGTGTATGGAGCTTAGCTTCTGGCACCAAAGTTTAGTCGTTTTAACAATTTTCGACTATTGATTTTCATTTAATTTGTACATATACATTGGTGGTTGATTCTAAATCCTTGCATTAATGTAATAACTTTTAATGTTGCCAAGATAAAAGAAAGTAATATTTTCATA - >AT5G40880.1
CGACTCTTGACCTTCAATTTCCTCCGTCTCTAAATTTCCTTTTCTTTTGGCTCTCTCTGCGATCGAGTTCGAAACCGTTCCCTAATCGAAGATCTAGATTCAACATACGTTTTATCTCTCAGTATGGATTACAAGGCGCCAAGGAAATACTCACACGGAAGGAATTTTGGAGTTGCGAGACAGCAAGATTTTGCAGCAGATATAGTTACGAGAAGACCTTATGCCCCGTATGACAATGGTATGAAGAAAGGTCCTAATAAGTTGTCAAGGAATCTGGTTTGGACGTCAAAAGAGTACAAATCACCAGAGGGAAACAGGCCAAGGCAGAATGCAGCCAATGGGTCAGCGAAACCACAAGTTATAGGCACAGGACATCGTGTATCAAACCAGCCGAGGAAGAATGCTGTGTATGGGCCAAGGAGCTCTTCTCTTTCAGACACCAGAGGTTGTGGGCCGAGACTCAATGGCAGTCCCAAAAAGAGTGTGTGTAATTTTTGGAAAGATGGAAACTGCAAAAAGGGCGAGAAATGCCAGTTCTTACACTCTTGGTCTTGTTTTCCTGGACTGGCCATGGTAGCTGCTCTTGAAGGACACAAGAATGATATTAAGGGAATCGCCCTTCCTCAGGGTTCAGATAAACTCTTTTCAGTCAGTGGTGATGGTACATTGCTAATTTGGGACTGCAATTCTGGTCAGTGTGTTCGATCCATCAACCTCCAGGCAGAAGCAGGGTCTCTAATTAGTGAAGGACCATGGGTTTTCCTTGGCTTGCCAAACGCTGTAAAGGCTTTTAACGTTCAAAACAGTAAAGATGTGCATCTTGAAGGGGTGGTTGGTCAGGTGCATGCAATGACTGCTGCAAACGGAATGCTTTTTGCTGGAACAAGTTCTGGTAGTATATTAGTCTGGAAAGCTACAGACTCGGAGTCTGATCCATTCAAATACTTGACATCTCTCGAGGGACATCATAGTGGTGAAGTCACTTGTTTTGTTGTTGGAGGTGAAGTGCTATACTCTGGTTCTGTCGATAAAACAATAAAGGTGTGGGATCTCAACACCTTGCAATGTAGAATGACCCTGAAGCAACATATCGGCACTGTCACTTCACTCTTATGTTGGGACAAGTGTCTGATATCGTCTTCCTTGGATGGGACCATAAAACTTTGGGCTTGTTCTGAAAATGAAAGTTTGAAAGTTGTTCAAACTCGCAAACAAGAACTGAGTGTTCATACTCTCTGTGGAATGCACGATGCAGAGGCCAAACCGATCATGTTTTGCTCTTACCAAAATGGAGCAGTTGGCATTTTCGACCTACCATCTTTTGAAGAAAGAGGAAAGATGTTCTCTACGCAGACGATCTGCACACTTACAATTGGTCCTGGAGGATTGTTATTCAGTGGAGACAAGAGTGGGAACTTGCGTGTATGGAGCTTAGCTTCTGGCACCAAAGTTTAGTCGTTTTAACAATTTTCGACTATTGATTTTCATTTAATTTGTACATATACATTGGTGGTTGATTCTAAATCCTTGCATTAATGTAATAACTTTTAATGTTGCCAAGATAAAAGAAAGTAATATTTTCATA
CDS Sequence
Protein Sequence