Information report for AT5G40850
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global transcription profiling reveals multiple sugar signal transduction mechanisms in Arabidopsis. DOI: 10.1105/tpc.104.022616 ; PMID: 15273295
- Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system. DOI: 10.1104/pp.104.042408 ; PMID: 15326282
- Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. DOI: 10.1186/1471-2164-8-281 ; PMID: 17705847
- Identification of a 150 bp cis-acting element of the AtNRT2.1 promoter involved in the regulation of gene expression by the N and C status of the plant. DOI: 10.1111/j.1365-3040.2007.01712.x ; PMID: 17897408
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Phylogenetic analysis and photoregulation of siroheme biosynthesis genes: uroporphyrinogen III methyltransferase and sirohydrochlorin ferrochelatase of Arabidopsis thaliana. DOI: 10.1007/s12298-016-0363-1 ; PMID: 27729721
- Alleviation of Nitrogen and Sulfur Deficiency and Enhancement of Photosynthesis in Arabidopsis thaliana by Overexpression of Uroporphyrinogen III Methyltransferase (UPM1). DOI: 10.3389/fpls.2017.02265 ; PMID: 29472934
Gene Resources
- UniProt: A0A1P8BE13
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BE13
- EnsemblPlants: AT5G40850.3
- Gramene: AT5G40850.3
- ExpressionAtlas: AT5G40850
- InterPro: IPR000878, IPR003043, IPR014777
- PANTHER: PTHR45790, PTHR45790:SF3
- SUPFAM: SSF53790
- PROSITE: PS00839, PS00840
- Gene3D: 3.40.1010.10
- SWISS-MODEL: A0A1P8BE13
Sequences
cDNA Sequence
- >AT5G40850.3
GATTCAAATTACGAATCTACCCTCTGCATAGCTCCGAGAGTGATGTGATTCCCCTTGAAAGCATCAAAGGGTTAGTAACCTTTTCTAGAGAGTGCCCTTTCGTCGTCAGAAAAACGTAAGCAAAAATGCTACAAATTAAAAAGTGTCTCCAACATGTGCATATTCACACACAAGTTGGTGTCAACGCTCAGACAAGAAAGGCGTGTGTTCATTGTTGAATCTTCCCATTTCCTCATCCAAATTCCGACATAACTATCCTAGCCGCCATTTGTTCTCCACATTACAAAACCCTCAGCAGCTTCAAAACTCTTCCGATCTCTCCCTCACGCTCGCAATTCTCTCGTCTCCATTTTAATAGTTTTTCTTCTCGGAATCACAAATCTTCGGCTTCTTGTTCCTTGGCGTGTGTGTGTGTTGTTGAATGGCTCTTGTTCAGCGGATTCCAATTTCCTCCTCCAGTATTCGGAATTGGCAACAAGCGAGGACCAATTTGACTCCTATTTGTTGTTTACATTACAATACTGCATCTTCTTCTTCTTCACCCTTTACAGAGAAGCACTCTGTGGAGAGATACCAAAGGGATCAATGGCTGTACAAAGCGGTTGAACCAACGCCACCATCGACTCCATCTCCATCGCCATTTGAAGATGAAGTCTTTGTTAGGGAAAACGACATTGCATCGCAGCTGCCTGAGCTGAAGAAGCTTTTGGCAGTGCTGAAAGAGAAGAGAGTTAAAGGATGCAAAGGTGGTGATTGTGGACCAGGAGATGTGTATCTTGTTGGGACAGGGCCAGGAGATCCTGAGCTTTTGACTCTTAAAGCTGTCAGAGTTATTCAAAGTGCCGATCTTTTGCTTTACGACAGGCTTGTCTCCAATGATGTCTTGGAGTTGGTTGCTCCTGATGCTAGACTTCTTTATGTCGGCAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAGATTCATGAACTACTCCTAAATTTTGCTGAAGCTGGTGCCACTGTTGTCAGGCTTAAAGGTGGAGATCCTCTGGTCTTTGGACGGGGCGGCGAAGAAATGGACTTTCTGCAACAGCAAGGGATTCGAGTTCAAGTTATACCAGGTAATGTTTGTTTGTTATCATGCTGTACATTCATCATTCTACTCCAGTTTACGCATATGATTGTGGCCTCTTGTGATCTCGTGCTGCTGAAACTTTATTTTATCGAAGTTTGCGATTATGATTGCAGGGATAACTGCGGCGTCGGGGATAGCAGCAGAGTTGGGGATTCCACTAACACATCGAGGTGTTGCAACTAGTGTAAGGTTTCTCACTGGTCATTCAAGGAAAGGAGGGACAGACCCTCTGTTTGTTGCAGAGAATGCAGCTGACCCGGATACAACACTTGTCGTTTATATGGGTTTGGGAACTTTACCTTCTCTTGCACAAAAACTAATGGACCATGGTCTCCCTTCTGATACACCAGCTGTTGCGGTTGAACGTGGAACCACTCCTCTACAGCGTACAGTTTTTGCTGAGCTTAAAGATTTTGCAACTGAGATTCAGTCAGCTGGATTGGTGTCACCAACACTCATCATCATAGGGAAAGTCGTTGAGCTCTCACCTTTATGGCCACATTGCACGAAAGAATCCTCCTGCCTTGTAGAGACCCGGTAGATATTTCACTCTTATTTTACGGGCGTGTGGCTTCCATCGACATTACGGTGAAGTTTTAGGAGCTATGGAGCTATGAAGGTTGAGACTTGAGAGATGTAATAAACAAAAAGGAAAGCTGATAGTTTCTTATGACGTGTCCTTCAATTGTTTTGGGACAATGGTAATGGCAATGTTAATGTAATAAACAAGTTTCAATCAGTGCCACTGTGACTAATTTTTCCACCACAA - >AT5G40850.2
GATTCAAATTACGAATCTACCCTCTGCATAGCTCCGAGAGTGATGTGATTCCCCTTGAAAGCATCAAAGGGTTAGTAACCTTTTCTAGAGAGTGCCCTTTCGTCGTCAGAAAAACGTAAGCAAAAATGCTACAAATTAAAAAGTGTCTCCAACATGTGCATATTCACACACAAGTTGGTGTCAACGCTCAGACAAGAAAGGCGTGTGTTCATTGTTGAATCTTCCCATTTCCTCATCCAAATTCCGACATAACTATCCTAGCCGCCATTTGTTCTCCACATTACAAAACCCTCAGCAGCTTCAAAACTCTTCCGATCTCTCCCTCACGCTCGCAATTCTCTCGTCTCCATTTTAATAGTTTTTCTTCTCGGAATCACAAATCTTCGGCTTCTTGTTCCTTGGCGTGTGTGTGTGTTGTTGAATGGCTCTTGTTCAGCGGATTCCAATTTCCTCCTCCAGTATTCGGAATTGGCAACAAGCGAGGACCAATTTGACTCCTATTTGTTGTTTACATTACAATACTGCATCTTCTTCTTCTTCACCCTTTACAGAGAAGCACTCTGTGGAGAGATACCAAAGGGATCAATGGCTGTACAAAGCGGTTGAACCAACGCCACCATCGACTCCATCTCCATCGCCATTTGAAGATGAAGTCTTTGTTAGGGAAAACGACATTGCATCGCAGCTGCCTGAGCTGAAGAAGCTTTTGGCAGTGCTGAAAGAGAAGAGAGTTAAAGGATGCAAAGGTGGTGATTGTGGACCAGGAGATGTGTATCTTGTTGGGACAGGGCCAGGAGATCCTGAGCTTTTGACTCTTAAAGCTGTCAGAGTTATTCAAAGTGCCGATCTTTTGCTTTACGACAGGCTTGTCTCCAATGATGTCTTGGAGTTGGTTGCTCCTGATGCTAGACTTCTTTATGTCGGCAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAGATTCATGAACTACTCCTAAATTTTGCTGAAGCTGGTGCCACTGTTGTCAGGCTTAAAGGTGGAGATCCTCTGGTCTTTGGACGGGGCGGCGAAGAAATGGACTTTCTGCAACAGCAAGGGATTCGAGTTCAAGTTATACCAGGTAATGTTTGTTTGTTATCATGCTGTACATTCATCATTCTACTCCAGTTTACGCATATGATTGTGGCCTCTTGTGATCTCGTGCTGCTGAAACTTTATTTTATCGAAGTTTGCGATTATGATTGCAGGGATAACTGCGGCGTCGGGGATAGCAGCAGAGTTGGGGATTCCACTAACACATCGAGGTGTTGCAACTAGTGTAAGGTTTCTCACTGGTCATTCAAGGAAAGGAGGGACAGACCCTCTGTTTGTTGCAGAGAATGCAGCTGACCCGGATACAACACTTGTCGTTTATATGGGTTTGGGAACTTTACCTTCTCTTGCACAAAAACTAATGGACCATGGTCTCCCTTCTGATACACCAGCTGTTGCGGTTGAACGTGGAACCACTCCTCTACAGCGTACAGTTTTTGCTGAGCTTAAAGATTTTGCAACTGAGATTCAGTCAGCTGGATTGGTGTCACCAACACTCATCATCATAGGGAAAGTCGTTGAGCTCTCACCTTTATGGCCACATTGCACGAAAGAATCCTCCTGCCTTGTAGAGACCCGGTAGATATTTCACTCTTATTTTACGGGCGTGTGGCTTCCATCGACATTACGGTGAAGTTTTAGGAGCTATGGAGCTATGAAGGTTGAGACTTGAGAGATGTAATAAACAAAAAGGAAAGCTGATAGTTTCTTATGACGTGTCCTTCAATTGTTTTGGGACAATGGTAATGGCAATGTTAATGTAATAAACAAGTTTCAATCAGTGCCACTGTGACTAATTTTTCCACCACAA - >AT5G40850.1
GATTCAAATTACGAATCTACCCTCTGCATAGCTCCGAGAGTGATGTGATTCCCCTTGAAAGCATCAAAGGGTTAGTAACCTTTTCTAGAGAGTGCCCTTTCGTCGTCAGAAAAACGTAAGCAAAAATGCTACAAATTAAAAAGTGTCTCCAACATGTGCATATTCACACACAAGTTGGTGTCAACGCTCAGACAAGAAAGGCGTGTGTTCATTGTTGAATCTTCCCATTTCCTCATCCAAATTCCGACATAACTATCCTAGCCGCCATTTGTTCTCCACATTACAAAACCCTCAGCAGCTTCAAAACTCTTCCGATCTCTCCCTCACGCTCGCAATTCTCTCGTCTCCATTTTAATAGTTTTTCTTCTCGGAATCACAAATCTTCGGCTTCTTGTTCCTTGGCGTGTGTGTGTGTTGTTGAATGGCTCTTGTTCAGCGGATTCCAATTTCCTCCTCCAGTATTCGGAATTGGCAACAAGCGAGGACCAATTTGACTCCTATTTGTTGTTTACATTACAATACTGCATCTTCTTCTTCTTCACCCTTTACAGAGAAGCACTCTGTGGAGAGATACCAAAGGGATCAATGGCTGTACAAAGCGGTTGAACCAACGCCACCATCGACTCCATCTCCATCGCCATTTGAAGATGAAGTCTTTGTTAGGGAAAACGACATTGCATCGCAGCTGCCTGAGCTGAAGAAGCTTTTGGCAGTGCTGAAAGAGAAGAGAGTTAAAGGATGCAAAGGTGGTGATTGTGGACCAGGAGATGTGTATCTTGTTGGGACAGGGCCAGGAGATCCTGAGCTTTTGACTCTTAAAGCTGTCAGAGTTATTCAAAGTGCCGATCTTTTGCTTTACGACAGGCTTGTCTCCAATGATGTCTTGGAGTTGGTTGCTCCTGATGCTAGACTTCTTTATGTCGGCAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAGATTCATGAACTACTCCTAAATTTTGCTGAAGCTGGTGCCACTGTTGTCAGGCTTAAAGGTGGAGATCCTCTGGTCTTTGGACGGGGCGGCGAAGAAATGGACTTTCTGCAACAGCAAGGGATTCGAGTTCAAGTTATACCAGGTAATGTTTGTTTGTTATCATGCTGTACATTCATCATTCTACTCCAGTTTACGCATATGATTGTGGCCTCTTGTGATCTCGTGCTGCTGAAACTTTATTTTATCGAAGTTTGCGATTATGATTGCAGGGATAACTGCGGCGTCGGGGATAGCAGCAGAGTTGGGGATTCCACTAACACATCGAGGTGTTGCAACTAGTGTAAGGTTTCTCACTGGTCATTCAAGGAAAGGAGGGACAGACCCTCTGTTTGTTGCAGAGAATGCAGCTGACCCGGATACAACACTTGTCGTTTATATGGGTTTGGGAACTTTACCTTCTCTTGCACAAAAACTAATGGACCATGGTCTCCCTTCTGATACACCAGCTGTTGCGGTTGAACGTGGAACCACTCCTCTACAGCGTACAGTTTTTGCTGAGCTTAAAGATTTTGCAACTGAGATTCAGTCAGCTGGATTGGTGTCACCAACACTCATCATCATAGGGAAAGTCGTTGAGCTCTCACCTTTATGGCCACATTGCACGAAAGAATCCTCCTGCCTTGTAGAGACCCGGTAGATATTTCACTCTTATTTTACGGGCGTGTGGCTTCCATCGACATTACGGTGAAGTTTTAGGAGCTATGGAGCTATGAAGGTTGAGACTTGAGAGATGTAATAAACAAAAAGGAAAGCTGATAGTTTCTTATGACGTGTCCTTCAATTGTTTTGGGACAATGGTAATGGCAATGTTAATGTAATAAACAAGTTTCAATCAGTGCCACTGTGACTAATTTTTCCACCACAA
CDS Sequence
Protein Sequence