Information report for AT5G40780
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Selective expression of a novel high-affinity transport system for acidic and neutral amino acids in the tapetum cells of Arabidopsis flowers. DOI: 10.1111/j.1365-313X.2004.02186.x ; PMID: 15361141
- Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. DOI: 10.1104/pp.105.067314 ; PMID: 16299181
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Arabidopsis LHT1 is a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. DOI: 10.1105/tpc.106.041012 ; PMID: 16816136
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- Auxin influx activity is associated with Frankia infection during actinorhizal nodule formation in Casuarina glauca. DOI: 10.1104/pp.107.101337 ; PMID: 17556507
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Root uptake of cationic amino acids by Arabidopsis depends on functional expression of amino acid permease 5. DOI: 10.1111/j.1469-8137.2008.02589.x ; PMID: 18681934
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- Transporters in Arabidopsis roots mediating uptake of amino acids at naturally occurring concentrations. DOI: 10.1111/j.1469-8137.2011.03699.x ; PMID: 21453345
- Molecular Evolution of Plant AAP and LHT Amino Acid Transporters. DOI: 10.3389/fpls.2012.00021 ; PMID: 22645574
- The AAP gene family for amino acid permeases contributes to development of the cyst nematode Heterodera schachtii in roots of Arabidopsis. DOI: 10.1016/j.plaphy.2013.05.016 ; PMID: 23831821
- An L,L-diaminopimelate aminotransferase mutation leads to metabolic shifts and growth inhibition in Arabidopsis. DOI: 10.1093/jxb/ery325 ; PMID: 30215754
- Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity. DOI: 10.1016/j.molp.2019.09.009 ; PMID: 31568832
- Identification of Lysine Histidine Transporter 2 as an 1-Aminocyclopropane Carboxylic Acid Transporter in Arabidopsis thaliana by Transgenic Complementation Approach. DOI: 10.3389/fpls.2019.01092 ; PMID: 31572413
- Cyanobacteria-Derived Proline Increases Stress Tolerance in Arabidopsis thaliana Root Hairs by Suppressing Programmed Cell Death. DOI: 10.3389/fpls.2020.490075 ; PMID: 33381127
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Arabidopsis LHT1 is a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. DOI: 10.1105/tpc.106.041012 ; PMID: 16816136
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: A0A1R7T3D5
- EMBL: CP002688
- AlphaFoldDB: A0A1R7T3D5
- EnsemblPlants: AT5G40780.2, AT5G40780.3
- Gramene: AT5G40780.2, AT5G40780.3
- Orthologous matrix: CESCKQI
- ExpressionAtlas: AT5G40780
- InterPro: IPR013057
- PANTHER: PTHR48017
- OrthoDB: A0A1R7T3D5
- SWISS-MODEL: A0A1R7T3D5
Sequences
cDNA Sequence
- >AT5G40780.2
GCTTACGATTTTTCTTAAACTCCTTAATTACTAGTTTCATTCTTTTTTTTCCCTCCAAAATTATGTAATTGAATTCTTACGAAAACAAAAAAAAAGGATCTACTTTTTGTTCGTAAGTTCAGATCTTAACTTTCAAGTACCGTACATGGTCAGTTTCCAACTTTTCCAAAGTTTAGGGAACTTCTACCAACCTTAACCATCGTCAGAAAAGACCAAGAGATCTTCCAAATCCATTATTGTACTTTTACTTTATCTTCATTTTACCCCATAATTTATTATATACACATTTTTAGCCCACTGACATATAATTTCTGACTTTTCTTCCATTGATTTTTTGTAGAATGAACAAAATCAACTTGTTCTTTACTTTCTTTCTTTTTTTTGTGTAAGCAGGATGATGAGAAATTAGCAGCAGCGAGACAAAAAGAGATCGAAGATTGGTTACCAATTACTTCATCAAGAAATGCAAAGTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTCGGTGCCGGAGTTCTTGGACTCCCTTACGCCATGTCTCAGCTCGGATGGGGACCGGGAATTGCAGTGTTGGTTTTGTCATGGGTCATAACACTATACACATTATGGCAAATGGTGGAAATGCATGAAATGGTTCCTGGAAAGCGTTTTGATCGTTACCATGAGCTCGGACAACACGCGTTTGGAGAAAAACTCGGTCTTTATATCGTTGTGCCGCAACAATTGATCGTTGAAATCGGTGTTTGCATCGTTTATATGGTCACTGGAGGCAAATCTTTAAAGAAATTTCATGAGCTTGTTTGTGATGATTGTAAACCAATCAAGCTTACTTATTTCATCATGATCTTTGCTTCGGTTCACTTCGTCCTCTCTCATCTTCCTAATTTCAATTCCATCTCCGGCGTTTCTCTTGCTGCTGCCGTTATGTCTCTCAGCTACTCAACAATCGCATGGGCATCATCAGCAAGCAAAGGTGTTCAAGAAGACGTTCAATACGGTTACAAAGCGAAAACAACAGCCGGTACGGTTTTCAATTTCTTCAGCGGTTTAGGTGATGTGGCATTTGCTTACGCGGGTCATAATGTGGTCCTTGAGATCCAAGCAACTATCCCTTCAACGCCTGAGAAACCCTCAAAAGGTCCCATGTGGAGAGGAGTCATCGTTGCTTACATCGTCGTAGCGCTCTGTTATTTCCCCGTGGCTCTCGTTGGATACTACATTTTCGGGAACGGAGTCGAAGATAATATTCTCATGTCACTTAAGAAACCGGCGTGGTTAATCGCCACGGCGAACATCTTCGTCGTGATCCATGTCATTGGTAGTTACCAGATATATGCAATGCCGGTATTTGATATGATGGAGACTTTATTGGTCAAGAAGCTAAATTTCAGACCAACCACAACTCTTCGGTTCTTTGTCCGTAATTTCTACGTTGCTGCAACTATGTTTGTTGGTATGACGTTTCCGTTCTTCGGTGGGCTTTTGGCGTTCTTTGGTGGATTCGCGTTTGCCCCAACCACATACTTCCTCCCTTGCGTCATTTGGTTAGCCATCTACAAACCCAAGAAATACAGCTTGTCTTGGTGGGCCAACTGGGTATGCATCGTGTTTGGTCTTTTCTTGATGGTCCTATCGCCAATTGGAGGGCTAAGGACAATCGTTATTCAAGCAAAAGGATACAAGTTTTACTCATAAACGCTATGTAATTCCACTAATTAAGAAACATATCTTTATATTAATATATGTGTGAAGAAGTTTTTAAGAGATCAACACGAGACATTTATAGAAGAATCAATGGTCTGGTCTGAATCTAAATGTAGCTTTTAGGGTTTGTATTTTCGTGTGTGTTATATATATTATATAAAACAATAATATTTTGCTCAAATAGGTTTTC - >AT5G40780.1
GCTTACGATTTTTCTTAAACTCCTTAATTACTAGTTTCATTCTTTTTTTTCCCTCCAAAATTATGTAATTGAATTCTTACGAAAACAAAAAAAAAGGATCTACTTTTTGTTCGTAAGTTCAGATCTTAACTTTCAAGTACCGTACATGGTCAGTTTCCAACTTTTCCAAAGTTTAGGGAACTTCTACCAACCTTAACCATCGTCAGAAAAGACCAAGAGATCTTCCAAATCCATTATTGTACTTTTACTTTATCTTCATTTTACCCCATAATTTATTATATACACATTTTTAGCCCACTGACATATAATTTCTGACTTTTCTTCCATTGATTTTTTGTAGAATGAACAAAATCAACTTGTTCTTTACTTTCTTTCTTTTTTTTGTGTAAGCAGGATGATGAGAAATTAGCAGCAGCGAGACAAAAAGAGATCGAAGATTGGTTACCAATTACTTCATCAAGAAATGCAAAGTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTCGGTGCCGGAGTTCTTGGACTCCCTTACGCCATGTCTCAGCTCGGATGGGGACCGGGAATTGCAGTGTTGGTTTTGTCATGGGTCATAACACTATACACATTATGGCAAATGGTGGAAATGCATGAAATGGTTCCTGGAAAGCGTTTTGATCGTTACCATGAGCTCGGACAACACGCGTTTGGAGAAAAACTCGGTCTTTATATCGTTGTGCCGCAACAATTGATCGTTGAAATCGGTGTTTGCATCGTTTATATGGTCACTGGAGGCAAATCTTTAAAGAAATTTCATGAGCTTGTTTGTGATGATTGTAAACCAATCAAGCTTACTTATTTCATCATGATCTTTGCTTCGGTTCACTTCGTCCTCTCTCATCTTCCTAATTTCAATTCCATCTCCGGCGTTTCTCTTGCTGCTGCCGTTATGTCTCTCAGCTACTCAACAATCGCATGGGCATCATCAGCAAGCAAAGGTGTTCAAGAAGACGTTCAATACGGTTACAAAGCGAAAACAACAGCCGGTACGGTTTTCAATTTCTTCAGCGGTTTAGGTGATGTGGCATTTGCTTACGCGGGTCATAATGTGGTCCTTGAGATCCAAGCAACTATCCCTTCAACGCCTGAGAAACCCTCAAAAGGTCCCATGTGGAGAGGAGTCATCGTTGCTTACATCGTCGTAGCGCTCTGTTATTTCCCCGTGGCTCTCGTTGGATACTACATTTTCGGGAACGGAGTCGAAGATAATATTCTCATGTCACTTAAGAAACCGGCGTGGTTAATCGCCACGGCGAACATCTTCGTCGTGATCCATGTCATTGGTAGTTACCAGATATATGCAATGCCGGTATTTGATATGATGGAGACTTTATTGGTCAAGAAGCTAAATTTCAGACCAACCACAACTCTTCGGTTCTTTGTCCGTAATTTCTACGTTGCTGCAACTATGTTTGTTGGTATGACGTTTCCGTTCTTCGGTGGGCTTTTGGCGTTCTTTGGTGGATTCGCGTTTGCCCCAACCACATACTTCCTCCCTTGCGTCATTTGGTTAGCCATCTACAAACCCAAGAAATACAGCTTGTCTTGGTGGGCCAACTGGGTATGCATCGTGTTTGGTCTTTTCTTGATGGTCCTATCGCCAATTGGAGGGCTAAGGACAATCGTTATTCAAGCAAAAGGATACAAGTTTTACTCATAAACGCTATGTAATTCCACTAATTAAGAAACATATCTTTATATTAATATATGTGTGAAGAAGTTTTTAAGAGATCAACACGAGACATTTATAGAAGAATCAATGGTCTGGTCTGAATCTAAATGTAGCTTTTAGGGTTTGTATTTTCGTGTGTGTTATATATATTATATAAAACAATAATATTTTGCTCAAATAGGTTTTC - >AT5G40780.3
GCTTACGATTTTTCTTAAACTCCTTAATTACTAGTTTCATTCTTTTTTTTCCCTCCAAAATTATGTAATTGAATTCTTACGAAAACAAAAAAAAAGGATCTACTTTTTGTTCGTAAGTTCAGATCTTAACTTTCAAGTACCGTACATGGTCAGTTTCCAACTTTTCCAAAGTTTAGGGAACTTCTACCAACCTTAACCATCGTCAGAAAAGACCAAGAGATCTTCCAAATCCATTATTGTACTTTTACTTTATCTTCATTTTACCCCATAATTTATTATATACACATTTTTAGCCCACTGACATATAATTTCTGACTTTTCTTCCATTGATTTTTTGTAGAATGAACAAAATCAACTTGTTCTTTACTTTCTTTCTTTTTTTTGTGTAAGCAGGATGATGAGAAATTAGCAGCAGCGAGACAAAAAGAGATCGAAGATTGGTTACCAATTACTTCATCAAGAAATGCAAAGTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTCGGTGCCGGAGTTCTTGGACTCCCTTACGCCATGTCTCAGCTCGGATGGGGACCGGGAATTGCAGTGTTGGTTTTGTCATGGGTCATAACACTATACACATTATGGCAAATGGTGGAAATGCATGAAATGGTTCCTGGAAAGCGTTTTGATCGTTACCATGAGCTCGGACAACACGCGTTTGGAGAAAAACTCGGTCTTTATATCGTTGTGCCGCAACAATTGATCGTTGAAATCGGTGTTTGCATCGTTTATATGGTCACTGGAGGCAAATCTTTAAAGAAATTTCATGAGCTTGTTTGTGATGATTGTAAACCAATCAAGCTTACTTATTTCATCATGATCTTTGCTTCGGTTCACTTCGTCCTCTCTCATCTTCCTAATTTCAATTCCATCTCCGGCGTTTCTCTTGCTGCTGCCGTTATGTCTCTCAGCTACTCAACAATCGCATGGGCATCATCAGCAAGCAAAGGTGTTCAAGAAGACGTTCAATACGGTTACAAAGCGAAAACAACAGCCGGTACGGTTTTCAATTTCTTCAGCGGTTTAGGTGATGTGGCATTTGCTTACGCGGGTCATAATGTGGTCCTTGAGATCCAAGCAACTATCCCTTCAACGCCTGAGAAACCCTCAAAAGGTCCCATGTGGAGAGGAGTCATCGTTGCTTACATCGTCGTAGCGCTCTGTTATTTCCCCGTGGCTCTCGTTGGATACTACATTTTCGGGAACGGAGTCGAAGATAATATTCTCATGTCACTTAAGAAACCGGCGTGGTTAATCGCCACGGCGAACATCTTCGTCGTGATCCATGTCATTGGTAGTTACCAGATATATGCAATGCCGGTATTTGATATGATGGAGACTTTATTGGTCAAGAAGCTAAATTTCAGACCAACCACAACTCTTCGGTTCTTTGTCCGTAATTTCTACGTTGCTGCAACTATGTTTGTTGGTATGACGTTTCCGTTCTTCGGTGGGCTTTTGGCGTTCTTTGGTGGATTCGCGTTTGCCCCAACCACATACTTCCTCCCTTGCGTCATTTGGTTAGCCATCTACAAACCCAAGAAATACAGCTTGTCTTGGTGGGCCAACTGGGTATGCATCGTGTTTGGTCTTTTCTTGATGGTCCTATCGCCAATTGGAGGGCTAAGGACAATCGTTATTCAAGCAAAAGGATACAAGTTTTACTCATAAACGCTATGTAATTCCACTAATTAAGAAACATATCTTTATATTAATATATGTGTGAAGAAGTTTTTAAGAGATCAACACGAGACATTTATAGAAGAATCAATGGTCTGGTCTGAATCTAAATGTAGCTTTTAGGGTTTGTATTTTCGTGTGTGTTATATATATTATATAAAACAATAATATTTTGCTCAAATAGGTTTTC
CDS Sequence
Protein Sequence