Information report for AT5G40580
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
- Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. DOI: 10.1093/genetics/149.2.677 ; PMID: 9611183
- The 20S proteasome gene family in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(97)01228-3 ; PMID: 9373170
- OrthoParaMap: distinguishing orthologs from paralogs by integrating comparative genome data and gene phylogenies. DOI: 10.1186/1471-2105-4-35 ; PMID: 12952558
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. DOI: 10.1074/jbc.M110.136622 ; PMID: 20516081
- Structure, function and regulation of plant proteasomes. DOI: 10.1016/j.biochi.2007.07.019 ; PMID: 17825468
- The m(6) A reader ECT2 post-transcriptionally regulates proteasome activity in Arabidopsis. DOI: 10.1111/nph.16660 ; PMID: 32416015
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
- Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. DOI: 10.1093/genetics/149.2.677 ; PMID: 9611183
- The 20S proteasome gene family in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(97)01228-3 ; PMID: 9373170
Gene Resources
- UniProt: F4KIN7
- EMBL: CP002688
- AlphaFoldDB: F4KIN7
- EnsemblPlants: AT5G40580.3, AT5G40580.4
- Gramene: AT5G40580.3, AT5G40580.4
- ExpressionAtlas: AT5G40580
- InterPro: IPR000243, IPR001353, IPR023333
- PANTHER: PTHR32194, PTHR32194:SF4
- SUPFAM: SSF56235
- PROSITE: PS51476
- Gene3D: 3.60.20.10
- OrthoDB: F4KIN7
- SWISS-MODEL: F4KIN7
- Conserved Domain Database: cd03763
Sequences
cDNA Sequence
- >AT5G40580.3
GATTTTTCACTTTTATTCTTCATACTGTCGTCTCCCTGGATTCTATCTTCTCGATTTTGGTGATTCGAACACGATTTTACCTATCCTTGAGCGATCTCGATCCCAACTTTTTGAGTTGATTTTATTTCAGGAGTTTTCAAAAAATCTGTTGTTAGTATGTGATTATTAGTTTCTACACTCTGTTCTTCTGGTTTCGTATCATCAGCTAGCTAGCTTTGAGTGGTGAATCGGAAAATGTCGCAGTCTTCCGTCGATATACCGCCAAAAGGTGGGTTTAGCTTCGATCTGTGCAAAAGGAATGATATGCTGACACAGAAGGGTCTTAAAGCGCCGTCGTTTCTCAAGACTGGAACGACTATCGATGGTGTAATACTTGGGGCTGATACACGGGCAACTGAAGGGCCTATTGTGGCTGATAAGAACTGTGAGAAGATTCACTACATGGCACCAAACATTTACTGTTGTGGTGCAGGAACCGCTGCTGACACTGAAGCAGTAACTGATATGGTCAGCTCACAGCTGCGGTTGCATAGATACCAGACTGGCCGAGATTCTCGAGTCGTTACTGCATTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGCCATGTCTCAGCTGCTCTTGTGCTTGGTGGAGTTGATATTACCGGGCCTCATCTTCACACGATATACCCACACGGTTCTACTGACACTCTACCATTTGCTACAATGGGTTCTGGTTCCCTTGCTGCCATGTCAGTGTTTGAAGCAAAGTATAAAGAAGGTCTAACTAGAGATGAAGGAATCAAGTTGGTTGCTGAAGCCATATGCTCTGGTATATTCAACGACCTTGGTAGTGGTAGCAATGTGGATATCTGTGTGATCACTAAGGGGCACAAGGAATACTTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTTAGCAGCAAAGGCTATTCATTCACCAAGAAAACCGAGGTTCTACTCACCAAAATTACACCATTATTGGAGCGAGTCGAAATTGTAGAAGTGGCTGGTGAAGCTATGGAGGAATGAATCTCGTGTGAGAGACAGATACTAAGAGTGAAACCATTGTTCTACCTCACATGACAGTCATGTTTACATTTTCTACTTTGTTCAATATGAACGACTAAAATCGAATCGTAGTTGCCTCCATTTCGTCTTTAAATTTGGCTTGAACTTGTGATTAATGATTATGGATGATTCGGTTTTGAAATTTAGCTCTCACATAATTTTCAAAAGAGCT - >AT5G40580.2
GATTTTTCACTTTTATTCTTCATACTGTCGTCTCCCTGGATTCTATCTTCTCGATTTTGGTGATTCGAACACGATTTTACCTATCCTTGAGCGATCTCGATCCCAACTTTTTGAGTTGATTTTATTTCAGGAGTTTTCAAAAAATCTGTTGTTAGTATGTGATTATTAGTTTCTACACTCTGTTCTTCTGGTTTCGTATCATCAGCTAGCTAGCTTTGAGTGGTGAATCGGAAAATGTCGCAGTCTTCCGTCGATATACCGCCAAAAGGTGGGTTTAGCTTCGATCTGTGCAAAAGGAATGATATGCTGACACAGAAGGGTCTTAAAGCGCCGTCGTTTCTCAAGACTGGAACGACTATCGATGGTGTAATACTTGGGGCTGATACACGGGCAACTGAAGGGCCTATTGTGGCTGATAAGAACTGTGAGAAGATTCACTACATGGCACCAAACATTTACTGTTGTGGTGCAGGAACCGCTGCTGACACTGAAGCAGTAACTGATATGGTCAGCTCACAGCTGCGGTTGCATAGATACCAGACTGGCCGAGATTCTCGAGTCGTTACTGCATTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGCCATGTCTCAGCTGCTCTTGTGCTTGGTGGAGTTGATATTACCGGGCCTCATCTTCACACGATATACCCACACGGTTCTACTGACACTCTACCATTTGCTACAATGGGTTCTGGTTCCCTTGCTGCCATGTCAGTGTTTGAAGCAAAGTATAAAGAAGGTCTAACTAGAGATGAAGGAATCAAGTTGGTTGCTGAAGCCATATGCTCTGGTATATTCAACGACCTTGGTAGTGGTAGCAATGTGGATATCTGTGTGATCACTAAGGGGCACAAGGAATACTTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTTAGCAGCAAAGGCTATTCATTCACCAAGAAAACCGAGGTTCTACTCACCAAAATTACACCATTATTGGAGCGAGTCGAAATTGTAGAAGTGGCTGGTGAAGCTATGGAGGAATGAATCTCGTGTGAGAGACAGATACTAAGAGTGAAACCATTGTTCTACCTCACATGACAGTCATGTTTACATTTTCTACTTTGTTCAATATGAACGACTAAAATCGAATCGTAGTTGCCTCCATTTCGTCTTTAAATTTGGCTTGAACTTGTGATTAATGATTATGGATGATTCGGTTTTGAAATTTAGCTCTCACATAATTTTCAAAAGAGCT - >AT5G40580.4
GATTTTTCACTTTTATTCTTCATACTGTCGTCTCCCTGGATTCTATCTTCTCGATTTTGGTGATTCGAACACGATTTTACCTATCCTTGAGCGATCTCGATCCCAACTTTTTGAGTTGATTTTATTTCAGGAGTTTTCAAAAAATCTGTTGTTAGTATGTGATTATTAGTTTCTACACTCTGTTCTTCTGGTTTCGTATCATCAGCTAGCTAGCTTTGAGTGGTGAATCGGAAAATGTCGCAGTCTTCCGTCGATATACCGCCAAAAGGTGGGTTTAGCTTCGATCTGTGCAAAAGGAATGATATGCTGACACAGAAGGGTCTTAAAGCGCCGTCGTTTCTCAAGACTGGAACGACTATCGATGGTGTAATACTTGGGGCTGATACACGGGCAACTGAAGGGCCTATTGTGGCTGATAAGAACTGTGAGAAGATTCACTACATGGCACCAAACATTTACTGTTGTGGTGCAGGAACCGCTGCTGACACTGAAGCAGTAACTGATATGGTCAGCTCACAGCTGCGGTTGCATAGATACCAGACTGGCCGAGATTCTCGAGTCGTTACTGCATTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGCCATGTCTCAGCTGCTCTTGTGCTTGGTGGAGTTGATATTACCGGGCCTCATCTTCACACGATATACCCACACGGTTCTACTGACACTCTACCATTTGCTACAATGGGTTCTGGTTCCCTTGCTGCCATGTCAGTGTTTGAAGCAAAGTATAAAGAAGGTCTAACTAGAGATGAAGGAATCAAGTTGGTTGCTGAAGCCATATGCTCTGGTATATTCAACGACCTTGGTAGTGGTAGCAATGTGGATATCTGTGTGATCACTAAGGGGCACAAGGAATACTTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTTAGCAGCAAAGGCTATTCATTCACCAAGAAAACCGAGGTTCTACTCACCAAAATTACACCATTATTGGAGCGAGTCGAAATTGTAGAAGTGGCTGGTGAAGCTATGGAGGAATGAATCTCGTGTGAGAGACAGATACTAAGAGTGAAACCATTGTTCTACCTCACATGACAGTCATGTTTACATTTTCTACTTTGTTCAATATGAACGACTAAAATCGAATCGTAGTTGCCTCCATTTCGTCTTTAAATTTGGCTTGAACTTGTGATTAATGATTATGGATGATTCGGTTTTGAAATTTAGCTCTCACATAATTTTCAAAAGAGCT - >AT5G40580.1
GATTTTTCACTTTTATTCTTCATACTGTCGTCTCCCTGGATTCTATCTTCTCGATTTTGGTGATTCGAACACGATTTTACCTATCCTTGAGCGATCTCGATCCCAACTTTTTGAGTTGATTTTATTTCAGGAGTTTTCAAAAAATCTGTTGTTAGTATGTGATTATTAGTTTCTACACTCTGTTCTTCTGGTTTCGTATCATCAGCTAGCTAGCTTTGAGTGGTGAATCGGAAAATGTCGCAGTCTTCCGTCGATATACCGCCAAAAGGTGGGTTTAGCTTCGATCTGTGCAAAAGGAATGATATGCTGACACAGAAGGGTCTTAAAGCGCCGTCGTTTCTCAAGACTGGAACGACTATCGATGGTGTAATACTTGGGGCTGATACACGGGCAACTGAAGGGCCTATTGTGGCTGATAAGAACTGTGAGAAGATTCACTACATGGCACCAAACATTTACTGTTGTGGTGCAGGAACCGCTGCTGACACTGAAGCAGTAACTGATATGGTCAGCTCACAGCTGCGGTTGCATAGATACCAGACTGGCCGAGATTCTCGAGTCGTTACTGCATTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGCCATGTCTCAGCTGCTCTTGTGCTTGGTGGAGTTGATATTACCGGGCCTCATCTTCACACGATATACCCACACGGTTCTACTGACACTCTACCATTTGCTACAATGGGTTCTGGTTCCCTTGCTGCCATGTCAGTGTTTGAAGCAAAGTATAAAGAAGGTCTAACTAGAGATGAAGGAATCAAGTTGGTTGCTGAAGCCATATGCTCTGGTATATTCAACGACCTTGGTAGTGGTAGCAATGTGGATATCTGTGTGATCACTAAGGGGCACAAGGAATACTTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTTAGCAGCAAAGGCTATTCATTCACCAAGAAAACCGAGGTTCTACTCACCAAAATTACACCATTATTGGAGCGAGTCGAAATTGTAGAAGTGGCTGGTGAAGCTATGGAGGAATGAATCTCGTGTGAGAGACAGATACTAAGAGTGAAACCATTGTTCTACCTCACATGACAGTCATGTTTACATTTTCTACTTTGTTCAATATGAACGACTAAAATCGAATCGTAGTTGCCTCCATTTCGTCTTTAAATTTGGCTTGAACTTGTGATTAATGATTATGGATGATTCGGTTTTGAAATTTAGCTCTCACATAATTTTCAAAAGAGCT
CDS Sequence
Protein Sequence