Information report for AT5G40550
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. DOI: 10.1016/j.molp.2021.03.014 ; PMID: 33737195
- Conserved and plant-specific histone acetyltransferase complexes cooperate to regulate gene transcription and plant development. DOI: 10.1038/s41477-023-01359-3 ; PMID: 36879016
Gene Resources
- UniProt: F4KHE9
- EMBL: CP002688
- AlphaFoldDB: F4KHE9
- EnsemblPlants: AT5G40550.2
- Gramene: AT5G40550.2
- ExpressionAtlas: AT5G40550
- InterPro: IPR010750, IPR037802, IPR047287
- PANTHER: PTHR21539, PTHR21539:SF0
- PROSITE: PS51518
- Gene3D: 2.30.30.140
- OrthoDB: F4KHE9
- SWISS-MODEL: F4KHE9
- Conserved Domain Database: cd20393, cd20394
Sequences
cDNA Sequence
- >AT5G40550.2
GAATCACATTTCCTTTTTTACCCCAAAAAAACCCTGAAATCTTTTTATTTAAAGAAAAAAATCTGAGAACTGAAAAATCTAACCTTTTTTTTTGTTGGATTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTCAGATTTATTATTGGGTCTGGTTATCTTTTTCTTACCATATTTTTTGTTTCCTCGTTAAGACGATTGTTTGGTAATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTTGGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAAAGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGGTCATCGCCAGTGAAAGAAAACAACCCCGGTATCCATGATTACATCAGTCTCTTTGTAAATAAACCGAAAAGCGAGAAATGATCGAAGAATTCAGTATGCATGGCAAAAACGCGCTTAGATTGAGATAGAATCATCACGTTTGTGTGTGCAATTTAAGTTAAAGCTGTAACCTTTGTGTCAAAGGAGATGATGAAATGAGAAAACAAAAAGAGAAGCCTTTGTTTCTTTCACTTTGAGAATGTAGAAAAACAAAAAGGGATCTCTGTTCCAGTGAGTAGATTTTGACTCAAACCGTCTTTGAATTACAAAAAAAATTAACCTCG - >AT5G40550.4
GAATCACATTTCCTTTTTTACCCCAAAAAAACCCTGAAATCTTTTTATTTAAAGAAAAAAATCTGAGAACTGAAAAATCTAACCTTTTTTTTTGTTGGATTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTCAGATTTATTATTGGGTCTGGTTATCTTTTTCTTACCATATTTTTTGTTTCCTCGTTAAGACGATTGTTTGGTAATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTTGGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAAAGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGGTCATCGCCAGTGAAAGAAAACAACCCCGGTATCCATGATTACATCAGTCTCTTTGTAAATAAACCGAAAAGCGAGAAATGATCGAAGAATTCAGTATGCATGGCAAAAACGCGCTTAGATTGAGATAGAATCATCACGTTTGTGTGTGCAATTTAAGTTAAAGCTGTAACCTTTGTGTCAAAGGAGATGATGAAATGAGAAAACAAAAAGAGAAGCCTTTGTTTCTTTCACTTTGAGAATGTAGAAAAACAAAAAGGGATCTCTGTTCCAGTGAGTAGATTTTGACTCAAACCGTCTTTGAATTACAAAAAAAATTAACCTCG - >AT5G40550.1
GAATCACATTTCCTTTTTTACCCCAAAAAAACCCTGAAATCTTTTTATTTAAAGAAAAAAATCTGAGAACTGAAAAATCTAACCTTTTTTTTTGTTGGATTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTCAGATTTATTATTGGGTCTGGTTATCTTTTTCTTACCATATTTTTTGTTTCCTCGTTAAGACGATTGTTTGGTAATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTTGGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAAAGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGGTCATCGCCAGTGAAAGAAAACAACCCCGGTATCCATGATTACATCAGTCTCTTTGTAAATAAACCGAAAAGCGAGAAATGATCGAAGAATTCAGTATGCATGGCAAAAACGCGCTTAGATTGAGATAGAATCATCACGTTTGTGTGTGCAATTTAAGTTAAAGCTGTAACCTTTGTGTCAAAGGAGATGATGAAATGAGAAAACAAAAAGAGAAGCCTTTGTTTCTTTCACTTTGAGAATGTAGAAAAACAAAAAGGGATCTCTGTTCCAGTGAGTAGATTTTGACTCAAACCGTCTTTGAATTACAAAAAAAATTAACCTCG - >AT5G40550.3
GAATCACATTTCCTTTTTTACCCCAAAAAAACCCTGAAATCTTTTTATTTAAAGAAAAAAATCTGAGAACTGAAAAATCTAACCTTTTTTTTTGTTGGATTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTTTACCAGCTGCAGAGATCAAAAACTTCGTGATTCATTCGAACAATCTAATTCAGATTTATTATTGGGTCTGGTTATCTTTTTCTTACCATATTTTTTGTTTCCTCGTTAAGACGATTGTTTGGTAATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTTGGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAAAGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTGGATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGGTCATCGCCAGTGAAAGAAAACAACCCCGGTATCCATGATTACATCAGTCTCTTTGTAAATAAACCGAAAAGCGAGAAATGATCGAAGAATTCAGTATGCATGGCAAAAACGCGCTTAGATTGAGATAGAATCATCACGTTTGTGTGTGCAATTTAAGTTAAAGCTGTAACCTTTGTGTCAAAGGAGATGATGAAATGAGAAAACAAAAAGAGAAGCCTTTGTTTCTTTCACTTTGAGAATGTAGAAAAACAAAAAGGGATCTCTGTTCCAGTGAGTAGATTTTGACTCAAACCGTCTTTGAATTACAAAAAAAATTAACCTCG
CDS Sequence
Protein Sequence