Gene Details:
- Gene ID: AT5G40340
- Gene Symbol: PDP3
- Gene Name: PWWP domain protein 3
- Description: Tudor/PWWP/MBT superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
Literature:
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- The genetic basis of zinc tolerance in the metallophyte Arabidopsis halleri ssp. halleri (Brassicaceae): an analysis of quantitative trait loci. DOI: 10.1534/genetics.106.064485 ; PMID: 17409091
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. DOI: 10.1105/tpc.114.129254 ; PMID: 25387881
- Arabidopsis thaliana MSI4/FVE associates with members of a novel family of plant specific PWWP/RRM domain proteins. DOI: 10.1007/s11103-014-0280-z ; PMID: 25600937
- Arabidopsis PWWP domain proteins mediate H3K27 trimethylation on FLC and regulate flowering time. DOI: 10.1111/jipb.12630 ; PMID: 29314758
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
Sequences:
cDNA Sequence
- >AT5G40340.1
TCTTTTATTACTCTGCTTATTAGCCGTCTAAGCATATTACAGCTGTCAATCATCGAAAGCATGTGACGCGTCTCTCTTATTTCATCCCACTCGCGTTCATATACACGTGTTATCTACTCTCTATCCGATTTCCGCCACGTAAGAATCTAGACACTGATGTTCTTATACACATAGCGAGTAAGCTGTATTTTACACTCTCGTAGCTAGTCAGTTTATTGTGATAGCGACACGGCTGATTTAGGGAAATAAATTAAAAACGTTGTCTTATTCCTGGGGCAAAAAAAAGCAGATAAGTAAGCAAAAAAAAAAACTCATTAATTACGAAAGTACCCTTAAATTTCTCCGAAAGGAAATTTTTGCGCCGCGTTTCATCTTCTCTCAAATCAAAATCCAGAGAGAAAAAAAAGAGAGGATTTTTCTCATGAGATTCTGAGAGTGTCTTTGTTCTTCTTACAAAGAAGTGTTTTTTCTTGAAGATTCTTCGGTCGCTGTTCGAAAAGTTGTTGTTTCGTTTCTCTCGGAGCTCAAAATCAGTCGGGAAGAAAAATGGAAATTGAAGTTGTTTTGGGAATCGGAGAAGATGCGGGACCTAAGCCTTGTTCTGCAGAGATTGAATCAGCTGAGAAAACCCTAAAAGATGATGGTGTTGTTCAAGAGAACGGTGTTAGGGTTTCCGACAACGGTGAGAAAAAGTCTGATGTTGTTGTTGATGTTGACGAGAAAAATGAGAAGAATTTGAACGAATCTGGAGTTATTGAAGATTGTGTTATGAATGGAGTTTCTTCCTTGCTCAAATTGAAGGAAGATGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGATGGCGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCATGGATACTGTGTAGGAGATTTTGTGTGGGGAAAAATTAAGAATCATCCATGGTGGCCAGGTCAGATTTATGATCCATCAGATGCTTCAGATTTGGCTTTGAAGATAAAGCAAAAAGGGAAATTGCTTGTGGCGTGTTTCGGAGACGGGACATTTGCTTGGTGCGGTGCGTCGCAGTTGAAACCGTTTGCAGAGAGTTTCAAAGAGTGTTCGAAAGTGAGTAATTCGCGGAGTTTTCTAGGTGCAGTGGAAGAGGCGGTTGAAGAAATTGGTAGACATATTGAGCGTGTATTGGTATGTGATTGTGCTGAGGAGAAGAAGCATGAGTTTGATAGTCCTTTAGTTAACAATGCTGGGATTAAAGAAGGTGTTTTGGTGCGTGATGTGAGACGGGAAATGATTTCGTCGTTGTTGATTGGTAAACATGGAGAGATTCTTAAAGATGTTAAGAGTTTTGCAGAGACTGTTAGTTTTAGTGGCTTGCTTGAGCTGGAGATATTGAAAAGGAAGGTATCTGCGTTTTATCGGTCTAATAGAGGATATGGTTTGACTGAGTATCATGAACCTCAATCAGTTCCAGGACTTGAAGACAAGAACAATGATGATGATGATGATGATGAAGAAAAGAATGTTAATGATGGGTTACAATGGCGTGCTAAACGGTCTAGAGTAGAAGAAGTAGCAGCTTTGGATCATGAAGAGTCGTCGTCTCTTCAGAGATCGTTAGAGAAGTGTTCTGGTTTTCCTGATCATAGGCTTCCCCACAGAAGGAAGGAGAAAAGCATTACTGAAATAATTGAGAAGGAGTCAGCTGCTAAGGTTAGGTTTGAGACAGAACCTGCGGATGGAGATGTAAAGTCAAATGTTAAGTCGGGTAGGAAGAAAACAAAACGCCATGATGAAGTTAATGGTGATCTTGAAAATGTAACTACTACTGCACTGTGGAGGAGAAGAAAGAGTGAAGTAGCTACAATTGAAGACGGTGGTAACAAGCAAGTGGTAGAAAGTAGCAAAGGCAAAACTTCGAGGAAGAAGAAGAAAATGGATGTGGATGATGGCGATGATGATGGGAGTGGAGACAAAGAAGAGTCTGAGGAAAAAGAGATTTCAGATCTGGAAATAAATATCGATTCAACTTCATTAGCTTCGCTGCGGAAAAAGGTAAGGTTTGATGATTCAGTCGTTGAAAGGAGTACTGAAAATGGCGAGACCGCTACACAAACATCAAAGAGAGAGAGGAAGAAGAGCAAGTATCTCTCGCCTGATTTCTTGTCAGATTTTTCACGGAAAGGAAGAAAAAAGAGTACAATCGAATCTGAATCTTCGAAAGTTTCAAGTCAGAGCCAAGTAGACGAGCGAGTGACTGATGCTAGTGATAGCCTCATGGAAGTGGAAGAAGATACGTTGGATAAACCTTGTGAACCATCATCTGATAATGGATTAGGTCAAGAAGAACTGTCTAGGGAACTTAGTAATGCCGTCGACTTTCTGAGGTTGGGAGCTACACCAAAGGAAATGCAGGATCTAATTCGTGTAGCTGCTCTTGGCACACAATATCCAAAAGACAGTAGCTCAAGAGACATGGTAAGAGAATTCATGACCATCTATAGAAGCTTCACATATCATGATGGAGCCAATCACAAGTTCTTAGGGAGCTATGATAGTTCGGATAAAGAAAAGGAAGAACTGAGTGAGATGGGTAAGCCTGTAACTAAGGGGAAAGAGAAGAAAGATAAGAAGGGTAAAGCAAAGCAGAAAGCAGAGGAGATAGAGGTAACTGGTAAAGAAGAGAATGAGACAGACAAGCATGGGAAAATGAAGAAAGAGCGAAAACGTAAGAAGTCTGAATCAAAGAAGGAAGGGGGTGAAGGAGAAGAAACCCAGAAAGAGGCTAATGAGTCAACAAAGAAAGAGAGAAAACGTAAGAAGTCTGAATCAAAGAAGCAATCAGATGGAGAAGAAGAAACTCAGAAAGAGCCAAGTGAGTCAACTAAAAAAGAGAGAAAACGTAAGAATCCTGAATCAAAGAAGAAGGCAGAAGCAGTTGAAGAAGAAGAAACCCGGAAAGAGTCTGTTGAATCAACCAAGAAAGAGAGAAAACGGAAGAAGCCTAAACACGACGAAGAAGAAGTCCCGAATGAGACTGAGAAACCCGAGAAGAAGAAGAAAAAGAAGAGAGAGGGAAAGTCTAAAAAGAAAGAAACTGAGACGGAATTTTCAGGAGCTGAGCTATATGTTACATTTGGTCCTGGTTCAAGTTTGCCTAAAAAGGAAGATCTGATTGAAATATATGAAAAATTTGGAGCTTTGGACAAAGAGAGAACTGATACGGTCGACAACAACTTCTCTGCCCATGTGGCTTTCTTGGATGTAGCTGATGGAGAAAAAGCCTTTGAATCCTCACTAGAGAAATGTCCGTTTACTTCTAATTCGACGGTGAAATTCAGACTCAAGTATCCAAATGAGAGAACAGAGGAGAAGAAAACTGAAGCTGAAGTTGCAGAGACGACAATGGAGGTGGAATATCTGAAGAAAAAGCTGGATGAGATGAAATTGTTACTTGATGGATGCGAAGGAGGAATGACTGAAGAAGTGAAAGTGAAACTTGAAGGTGAGATGGTAAATTTGTTGGAGAAAGTGATAGAGATGAGATCTTCTTAGGATTATGATTTTATGTTTTTATTTTGTTGGTTGAGAACTTTCAGGACAGGTTTTAGGATATTTATGGTTTCTGCAAAACATAACAAAAGTATTTTGAGAGGTTAATGTCTTGGTGATACTATGATCTTGTCGTAGGGTAGACAGAATTAGATCGATGTTCTATGTTTTTGTGTAGACTTTTTTAAAGTTTACCAACTTTGATACTAAACCCATTAGTGGGCTTTTGGTTTATCACTCTCTTGAAAGCCCACTAATTT - >AT5G40340.2
TCTTTTATTACTCTGCTTATTAGCCGTCTAAGCATATTACAGCTGTCAATCATCGAAAGCATGTGACGCGTCTCTCTTATTTCATCCCACTCGCGTTCATATACACGTGTTATCTACTCTCTATCCGATTTCCGCCACGTAAGAATCTAGACACTGATGTTCTTATACACATAGCGAGTAAGCTGTATTTTACACTCTCGTAGCTAGTCAGTTTATTGTGATAGCGACACGGCTGATTTAGGGAAATAAATTAAAAACGTTGTCTTATTCCTGGGGCAAAAAAAAGCAGATAAGTAAGCAAAAAAAAAAACTCATTAATTACGAAAGTACCCTTAAATTTCTCCGAAAGGAAATTTTTGCGCCGCGTTTCATCTTCTCTCAAATCAAAATCCAGAGAGAAAAAAAAGAGAGGATTTTTCTCATGAGATTCTGAGAGTGTCTTTGTTCTTCTTACAAAGAAGTGTTTTTTCTTGAAGATTCTTCGGTCGCTGTTCGAAAAGTTGTTGTTTCGTTTCTCTCGGAGCTCAAAATCAGTCGGGAAGAAAAATGGAAATTGAAGTTGTTTTGGGAATCGGAGAAGATGCGGGACCTAAGCCTTGTTCTGCAGAGATTGAATCAGCTGAGAAAACCCTAAAAGATGATGGTGTTGTTCAAGAGAACGGTGTTAGGGTTTCCGACAACGGTGAGAAAAAGTCTGATGTTGTTGTTGATGTTGACGAGAAAAATGAGAAGAATTTGAACGAATCTGGAGTTATTGAAGATTGTGTTATGAATGGAGTTTCTTCCTTGCTCAAATTGAAGGAAGATGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGATGGCGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCATGGATACTGTGTAGGAGATTTTGTGTGGGGAAAAATTAAGAATCATCCATGGTGGCCAGGTCAGATTTATGATCCATCAGATGCTTCAGATTTGGCTTTGAAGATAAAGCAAAAAGGGAAATTGCTTGTGGCGTGTTTCGGAGACGGGACATTTGCTTGGTGCGGTGCGTCGCAGTTGAAACCGTTTGCAGAGAGTTTCAAAGAGTGTTCGAAAGTGAGTAATTCGCGGAGTTTTCTAGGTGCAGTGGAAGAGGCGGTTGAAGAAATTGGTAGACATATTGAGCGTGTATTGGTATGTGATTGTGCTGAGGAGAAGAAGCATGAGTTTGATAGTCCTTTAGTTAACAATGCTGGGATTAAAGAAGGTGTTTTGGTGCGTGATGTGAGACGGGAAATGATTTCGTCGTTGTTGATTGGTAAACATGGAGAGATTCTTAAAGATGTTAAGAGTTTTGCAGAGACTGTTAGTTTTAGTGGCTTGCTTGAGCTGGAGATATTGAAAAGGAAGGTATCTGCGTTTTATCGGTCTAATAGAGGATATGGTTTGACTGAGTATCATGAACCTCAATCAGTTCCAGGACTTGAAGACAAGAACAATGATGATGATGATGATGATGAAGAAAAGAATGTTAATGATGGGTTACAATGGCGTGCTAAACGGTCTAGAGTAGAAGAAGTAGCAGCTTTGGATCATGAAGAGTCGTCGTCTCTTCAGAGATCGTTAGAGAAGTGTTCTGGTTTTCCTGATCATAGGCTTCCCCACAGAAGGAAGGAGAAAAGCATTACTGAAATAATTGAGAAGGAGTCAGCTGCTAAGGTTAGGTTTGAGACAGAACCTGCGGATGGAGATGTAAAGTCAAATGTTAAGTCGGGTAGGAAGAAAACAAAACGCCATGATGAAGTTAATGGTGATCTTGAAAATGTAACTACTACTGCACTGTGGAGGAGAAGAAAGAGTGAAGTAGCTACAATTGAAGACGGTGGTAACAAGCAAGTGGTAGAAAGTAGCAAAGGCAAAACTTCGAGGAAGAAGAAGAAAATGGATGTGGATGATGGCGATGATGATGGGAGTGGAGACAAAGAAGAGTCTGAGGAAAAAGAGATTTCAGATCTGGAAATAAATATCGATTCAACTTCATTAGCTTCGCTGCGGAAAAAGGTAAGGTTTGATGATTCAGTCGTTGAAAGGAGTACTGAAAATGGCGAGACCGCTACACAAACATCAAAGAGAGAGAGGAAGAAGAGCAAGTATCTCTCGCCTGATTTCTTGTCAGATTTTTCACGGAAAGGAAGAAAAAAGAGTACAATCGAATCTGAATCTTCGAAAGTTTCAAGTCAGAGCCAAGTAGACGAGCGAGTGACTGATGCTAGTGATAGCCTCATGGAAGTGGAAGAAGATACGTTGGATAAACCTTGTGAACCATCATCTGATAATGGATTAGGTCAAGAAGAACTGTCTAGGGAACTTAGTAATGCCGTCGACTTTCTGAGGTTGGGAGCTACACCAAAGGAAATGCAGGATCTAATTCGTGTAGCTGCTCTTGGCACACAATATCCAAAAGACAGTAGCTCAAGAGACATGGTAAGAGAATTCATGACCATCTATAGAAGCTTCACATATCATGATGGAGCCAATCACAAGTTCTTAGGGAGCTATGATAGTTCGGATAAAGAAAAGGAAGAACTGAGTGAGATGGGTAAGCCTGTAACTAAGGGGAAAGAGAAGAAAGATAAGAAGGGTAAAGCAAAGCAGAAAGCAGAGGAGATAGAGGTAACTGGTAAAGAAGAGAATGAGACAGACAAGCATGGGAAAATGAAGAAAGAGCGAAAACGTAAGAAGTCTGAATCAAAGAAGGAAGGGGGTGAAGGAGAAGAAACCCAGAAAGAGGCTAATGAGTCAACAAAGAAAGAGAGAAAACGTAAGAAGTCTGAATCAAAGAAGCAATCAGATGGAGAAGAAGAAACTCAGAAAGAGCCAAGTGAGTCAACTAAAAAAGAGAGAAAACGTAAGAATCCTGAATCAAAGAAGAAGGCAGAAGCAGTTGAAGAAGAAGAAACCCGGAAAGAGTCTGTTGAATCAACCAAGAAAGAGAGAAAACGGAAGAAGCCTAAACACGACGAAGAAGAAGTCCCGAATGAGACTGAGAAACCCGAGAAGAAGAAGAAAAAGAAGAGAGAGGGAAAGTCTAAAAAGAAAGAAACTGAGACGGAATTTTCAGGAGCTGAGCTATATGTTACATTTGGTCCTGGTTCAAGTTTGCCTAAAAAGGAAGATCTGATTGAAATATATGAAAAATTTGGAGCTTTGGACAAAGAGAGAACTGATACGGTCGACAACAACTTCTCTGCCCATGTGGCTTTCTTGGATGTAGCTGATGGAGAAAAAGCCTTTGAATCCTCACTAGAGAAATGTCCGTTTACTTCTAATTCGACGGTGAAATTCAGACTCAAGTATCCAAATGAGAGAACAGAGGAGAAGAAAACTGAAGCTGAAGTTGCAGAGACGACAATGGAGGTGGAATATCTGAAGAAAAAGCTGGATGAGATGAAATTGTTACTTGATGGATGCGAAGGAGGAATGACTGAAGAAGTGAAAGTGAAACTTGAAGGTGAGATGGTAAATTTGTTGGAGAAAGTGATAGAGATGAGATCTTCTTAGGATTATGATTTTATGTTTTTATTTTGTTGGTTGAGAACTTTCAGGACAGGTTTTAGGATATTTATGGTTTCTGCAAAACATAACAAAAGTATTTTGAGAGGTTAATGTCTTGGTGATACTATGATCTTGTCGTAGGGTAGACAGAATTAGATCGATGTTCTATGTTTTTGTGTAGACTTTTTTAAAGTTTACCAACTTTGATACTAAACCCATTAGTGGGCTTTTGGTTTATCACTCTCTTGAAAGCCCACTAATTT
CDS Sequence
Protein Sequence