Information report for AT5G40330
Gene Details
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Functional Descriptions
- PO:0006504 — leaf trichome — tricoma de hoja (Spanish, exact), 葉毛（毛茸、糸状体） (Japanese, exact), phyllid trichome (narrow)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- leaf trichome , root , seed , vascular leaf , flower , stem , root
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01759.x ; PMID: 12787253
- TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2004.02138.x ; PMID: 15255866
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- The Arabidopsis MYB5 transcription factor regulates mucilage synthesis, seed coat development, and trichome morphogenesis. DOI: 10.1105/tpc.108.063503 ; PMID: 19136646
- SAD2 in Arabidopsis functions in trichome initiation through mediating GL3 function and regulating GL1, TTG1 and GL2 expression. DOI: 10.1111/j.1744-7909.2008.00695.x ; PMID: 18713401
- Transcriptome analysis of Arabidopsis wild-type and gl3-sst sim trichomes identifies four additional genes required for trichome development. DOI: 10.1093/mp/ssp037 ; PMID: 19626137
- Quantitative expression analysis of selected transcription factors in pavement, basal and trichome cells of mature leaves from Arabidopsis thaliana. DOI: 10.1007/s00709-009-0099-7 ; PMID: 20101514
- HD-Zip Proteins GL2 and HDG11 Have Redundant Functions in Arabidopsis Trichomes, and GL2 Activates a Positive Feedback Loop via MYB23. DOI: 10.1105/tpc.113.120360 ; PMID: 24824485
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- RPN1a, a subunit of the 26S proteasome, controls trichome development in Arabidopsis. DOI: 10.1016/j.plaphy.2015.01.012 ; PMID: 25676129
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Arabidopsis ACYL-COA-BINDING PROTEIN1 interacts with STEROL C4-METHYL OXIDASE1-2 to modulate gene expression of homeodomain-leucine zipper IV transcription factors. DOI: 10.1111/nph.14965 ; PMID: 29288621
- Root hair abundance impacts cadmium accumulation in Arabidopsis thaliana shoots. DOI: 10.1093/aob/mcx220 ; PMID: 29394308
- Insights into the role of transcription factors controlling mucilage production in the Arabidopsis seed coat. DOI: 10.1016/j.plantsci.2018.04.021 ; PMID: 29807590
- MYB-bHLH-TTG1 Regulates Arabidopsis Seed Coat Biosynthesis Pathways Directly and Indirectly via Multiple Tiers of Transcription Factors. DOI: 10.1093/pcp/pcaa027 ; PMID: 32154880
- Molecular Basis for a Cell Fate Switch in Response to Impaired Ribosome Biogenesis in the Arabidopsis Root Epidermis. DOI: 10.1105/tpc.19.00773 ; PMID: 32371546
- Tyrosylprotein sulfotransferase-dependent and -independent regulation of root development and signaling by PSK LRR receptor kinases in Arabidopsis. DOI: 10.1093/jxb/erab233 ; PMID: 34028532
- SDG26 Is Involved in Trichome Control in Arabidopsis thaliana: Affecting Phytohormones and Adjusting Accumulation of H3K27me3 on Genes Related to Trichome Growth and Development. DOI: 10.3390/plants12081651 ; PMID: 37111875
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. DOI: 10.1073/pnas.0510607103 ; PMID: 16581911
Gene Resources
- UniProt: A0A178UNZ5
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UNZ5
- EnsemblPlants: AT5G40330.1
- Gramene: AT5G40330.1
- KEGG: ath:AT5G40330
- Orthologous matrix: QGHWNRI
- ExpressionAtlas: AT5G40330
- InterPro: IPR001005, IPR009057, IPR015495
- PANTHER: PTHR47999, PTHR47999:SF59
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A178UNZ5
- SWISS-MODEL: A0A178UNZ5
- Conserved Domain Database: cd00167
Sequences
cDNA Sequence
- >AT5G40330.1
ACCGACTCAGCCACTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGGGATCAAGAAAAGTGAAGAAGAATGAGAATGACAAGAGATGGAAAAGAACATGAATACAAGAAAGGTTTATGGACAGTGGAAGAAGACAAGATCCTCATGGATTATGTCCGAACTCATGGCCAGGGCCACTGGAACCGCATCGCCAAGAAAACTGGGCTCAAGAGATGTGGGAAAAGCTGTAGGTTGAGATGGATGAACTACTTAAGCCCTAATGTTAACAGAGGCAATTTTACTGACCAAGAAGAAGATCTCATCATCAGACTCCACAAGCTCCTCGGCAACAGATGGTCGTTGATAGCGAAAAGAGTTCCGGGAAGAACAGACAACCAAGTAAAGAATTACTGGAACACACATCTCAGCAAGAAACTTGGTCTCGGAGATCATTCAACTGCCGTCAAAGCCGCATGCGGTGTAGAGTCTCCACCGTCTATGGCCCTTATAACCACAACGTCCTCCTCTCATCAAGAGATCTCCGGTGGAAAAAATTCAACTCTAAGGTTCGACACTTTAGTTGACGAATCCAAACTCAAACCAAAATCCAAACTAGTCCACGCAACACCAACTGACGTAGAAGTTGCAGCTACGGTTCCAAATCTGTTCGATACCTTTTGGGTTCTTGAAGACGACTTCGAGCTTAGTTCACTCACTATGATGGATTTTACTAATGGGTATTGCCTTTGAATATCTTTGATGATTAGCTTCTAAAAAGTAATTAATTATCGAATAATAGATTATAATGAACAATAATAATAATATGAATACAATTAAATTTTTTTCCGAATATTTGCTTGTAGCTTTTGTACTTTCTTTTGTAAAAGTAAGGATGATCAGTTGATAAAAAAATCTTATACTAGAAAGTTATTTGGTTATGTCC
CDS Sequence
Protein Sequence