Gene Details:
- Gene ID: AT5G40300
- Gene Symbol: CASPL4A1
- Gene Name: CASP-like protein 4A1
- Description: Uncharacterized protein family (UPF0497);(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Function-related keywords:
Literature:
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family. DOI: 10.1104/pp.114.239137 ; PMID: 24920445
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT5G40300.1
TTATTTTTAAAGTAAGTCTTTTTCTCGTCTTCTTCCTCATTTGTGTCCATTGACCAAAGGTGGAAGAAGAAGAGCTTACTTCATCACTTCCGCTGTCAAACAAACTCAAATTAATTTTTAAAAACCCACAAAATATCTACGAAAATGGAAGAATTAGAAAAAACCCAGAAATTTCAGAAGAAGAAGAAGCAACAACAAGAGAAACAAGACCAGTCTTCACCAATCAACTTCGAGATGTCTTCAAGATCATCACTTCATTCATTACCACAAACAACGATTGAATCACCTCCTGATTCACCAACCCTCTCTTCAATCCCCGATAGCCATGGATCTTCTCCTCACACGATTATTCCAACTCCTTCTGTGGCCAAGACGGAGACTCCTTTTAGGGTTACTAACGGAGAGGAGGAGAAGAAAGTCAGCGAGAGTAGGAGACAATTGAGACCGAGCTTTTCTTCTTCTTCTTCTACTCCGCGTGAATCGAAATGGGCAAGTTTGATTAGGAAAGCTCTACTTGGATTTAGGGTTATTGCGTTTGTTTCGTGTCTTGTTTCGTTCTCTGTAATGGTTTCTGATAGAGATAAAGGATGGGCTCATGATTCTTTCTACAACTACAAAGAATTCAGGTTCTGTTTGGCTGCGAATGTGATTGGTTTTGTCTACTCTGGTTTTATGATATGTGATCTTGTATACCTGTTATCTACTAGCATCCGAAGATCACGACATAACCTGCGACATTTCTTGGAATTTGGTCTTGATCAAATGCTAGCTTATCTTCTTGCATCAGCTTCAACTTCAGCTTCGATCCGCGTAGATGATTGGCAATCAAACTGGGGAGCAGACAAGTTCCCAGACTTAGCTAGAGCATCTGTCGCACTGTCTTACGTCTCCTTTGTCGCATTCGCCTTCTGCTCATTGGCTTCCGGTTATGCTCTATGTGCACTCCGGTCCATCTAAACTAAACAAGCGCAAGCTCGAGACAAAAAGTCTCATTTTGTCTACTCTCAGAAGTTGTATCCTTGACCCTAAACGGGTCCAGTTTCTGATTTTTAGAAGAAACTTTTATTTTATATAGTGGAGAATATTCCATCTTGTTAAAAGATGGTGCGAATGCTCGTTTATACATCACTTTATCTATTTCACTTTTTATTATATAGTTCTAAGAAAAGCTATATGATGCTATCTTCTCCTTAAACTTTTGATTTAGTGCGATTGCTTTTAGATGCTTACATTTAACTTTAAGAAGTCAGTATATCTAAGTCAGGTCAGAGATATGTCAAGTTAAGTATTGACATTTTCTTACTAAAATAGTAAC
CDS Sequence
Protein Sequence