Information report for AT5G40280
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions. DOI: 10.1073/pnas.190309197 ; PMID: 11005831
- Prenylation of the floral transcription factor APETALA1 modulates its function. DOI: 10.1105/tpc.12.8.1257 ; PMID: 10948247
- The WIGGUM gene is required for proper regulation of floral meristem size in Arabidopsis. DOI: 10.1242/dev.125.14.2545 ; PMID: 9636070
- The ULTRAPETALA gene controls shoot and floral meristem size in Arabidopsis. DOI: 10.1242/dev.128.8.1323 ; PMID: 11262233
- Localization, ion channel regulation, and genetic interactions during abscisic acid signaling of the nuclear mRNA cap-binding protein, ABH1. DOI: 10.1104/pp.009480 ; PMID: 12427994
- The ABSCISIC ACID INSENSITIVE 3 (ABI3) gene is modulated by farnesylation and is involved in auxin signaling and lateral root development in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01707.x ; PMID: 12662310
- Detection of protein-protein interactions in plants using bimolecular fluorescence complementation. DOI: 10.1111/j.1365-313X.2004.02206.x ; PMID: 15469499
- Protein geranylgeranyltransferase I is involved in specific aspects of abscisic acid and auxin signaling in Arabidopsis. DOI: 10.1104/pp.105.065045 ; PMID: 16183844
- Developmental characterization of the fasciated locus and mapping of Arabidopsis candidate genes involved in the control of floral meristem size and carpel number in tomato. DOI: 10.1139/g06-059 ; PMID: 17036074
- Abscisic acid antagonizes ethylene-induced hyponastic growth in Arabidopsis. DOI: 10.1104/pp.106.092700 ; PMID: 17158582
- Interaction between sugar and abscisic acid signalling during early seedling development in Arabidopsis. DOI: 10.1007/s11103-008-9308-6 ; PMID: 18278579
- Functional analysis of Arabidopsis postprenylation CaaX processing enzymes and their function in subcellular protein targeting. DOI: 10.1104/pp.108.120477 ; PMID: 18641086
- Isoprenylcysteine methylation and demethylation regulate abscisic acid signaling in Arabidopsis. DOI: 10.1105/tpc.107.053389 ; PMID: 18957507
- A novel role for protein farnesylation in plant innate immunity. DOI: 10.1104/pp.108.117663 ; PMID: 18599656
- The CaaX specificities of Arabidopsis protein prenyltransferases explain era1 and ggb phenotypes. DOI: 10.1186/1471-2229-10-118 ; PMID: 20565889
- Nonspecific phospholipase C NPC4 promotes responses to abscisic acid and tolerance to hyperosmotic stress in Arabidopsis. DOI: 10.1105/tpc.109.071720 ; PMID: 20699393
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- A genetic framework for H2O2 induced cell death in Arabidopsis thaliana. DOI: 10.1186/s12864-015-1964-8 ; PMID: 26493993
- The Arabidopsis heat-intolerant 5 (hit5)/enhanced response to aba 1 (era1) mutant reveals the crucial role of protein farnesylation in plant responses to heat stress. DOI: 10.1111/nph.14212 ; PMID: 27673599
- Farnesylated heat shock protein 40 is a component of membrane-bound RISC in Arabidopsis. DOI: 10.1074/jbc.RA118.003887 ; PMID: 30194279
- AtJ3, a specific HSP40 protein, mediates protein farnesylation-dependent response to heat stress in Arabidopsis. DOI: 10.1007/s00425-019-03239-7 ; PMID: 31309322
- Protein farnesylation negatively regulates brassinosteroid signaling via reducing BES1 stability in Arabidopsis thaliana. DOI: 10.1111/jipb.13093 ; PMID: 33764637
Gene Resources
- UniProt: A0A1P8BE65
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BE65
- EnsemblPlants: AT5G40280.2
- Gramene: AT5G40280.2
- ExpressionAtlas: AT5G40280
- InterPro: IPR001330, IPR008930, IPR026872
- PANTHER: PTHR11774, PTHR11774:SF6
- SUPFAM: SSF48239
- Gene3D: 1.50.10.20
- SWISS-MODEL: A0A1P8BE65
- Conserved Domain Database: cd02893
Sequences
cDNA Sequence
- >AT5G40280.2
ATGCCAGTAGTAACCCGCTTGATTCGTTTGAAGTGTGTAGGGCTCAGACTTGACCGGAGTGGACTCAATCGGCGAATCTGTCACGGAGGACACGGGGAATCAACGCGGCGGAGAGTGATGGAAGAGCTTTCAAGCCTAACCGTGAGTCAGCGCGAGCAATTTCTGGTGGAGAACGATGTGTTCGGGATCTATAATTACTTCGACGCCAGCGACGTTTCTACTCAAAAATACATGATGGAGATTCAGCGAGATAAGCAATTGGATTATCTGATGAAAGGCTTAAGGCAGCTTGGTCCGCAGTTTTCTTCCTTAGATGCTAATCGACCTTGGCTTTGTTACTGGATTCTTCATTCAATAGCTTTGCTTGGGGAGACTGTGGATGATGAATTAGAAAGCAATGCCATTGACTTCCTTGGACGCTGCCAGGGCTCTGAAGGTGGATACGGTGGTGGTCCTGGCCAACTTCCACATCTTGCAACTACTTATGCTGCAGTGAATGCACTTGTTACTTTAGGAGGTGACAAAGCCCTTTCTTCAATTAATAGGTGGTGCATTCTTTTTTCTTTGTGGTCAGTTTCTTTTATTAAGAGTCTAGTGATGTTTCCTCTAGAATACTTACATGTGACTCATTCTTCTTTCAGAGAAAAAATGTCTTGTTTTTTAAGACGGATGAAGGATACAAGTGGAGGTTTCAGGATGCATGATATGGGAGAAATGGATGTTCGTGCATGCTACACTGCAATTTCGGTTGCAAGCATCCTAAATATTATGGATGATGAACTCACCCAGGGCCTAGGAGATTACATCTTGAGTTGCCAAACTTATGAAGGTGGCATTGGAGGGGAACCTGGCTCCGAAGCTCACGGTGGGTATACCTACTGTGGTTTGGCTGCTATGATTTTAATCAATGAGGTCGACCGTTTGAATTTGGATTCATTAATGAATTGGGCTGTACATCGACAAGGAGTAGAAATGGGATTTCAAGGTAGGACGAACAAATTGGTCGATGGTTGCTACACATTTTGGCAGGCAGCCCCTTGTGTTCTACTACAAAGATTATATTCAACCAATGATCATGACGTTCATGGATCATCACATATATCAGAAGGGACAAATGAAGAACATCATGCTCATGATGAAGATGACCTTGAAGACAGTGATGATGATGATGATTCTGATGAGGACAACGATGAAGATTCAGTGAATGGTCACAGAATCCATCATACATCCACCTACATTAACAGGAGAATGCAACTGGTTTTTGATAGCCTCGGCTTGCAGAGATATGTACTCTTGTGCTCTAAGATCCCTGACGGTGGATTCAGAGACAAGCCGAGGAAACCCCGTGACTTCTACCACACATGTTACTGCCTGAGCGGCTTGTCTGTGGCTCAGCACGCTTGGTTAAAAGACGAGGACACTCCTCCTTTGACTCGCGACATTATGGGTGGCTACTCGAATCTCCTTGAACCTGTTCAACTTCTTCACAACATTGTCATGGATCAGTATAATGAAGCTATCGAGTTCTTCTTTAAAGCAGCATGACCCGTTGTTGCTAATGTATGGGAAACTCCAAACATAAGAGTTTTCGTAGTGTTGTAACTTGTAAGATTTCAAAAGAAGTTTCACTAATTTAACCTTAAAACCTGTTACTTTTTTATTACGTATATACCATTTATCATATCTTTGGTTTACGACTTAAAGAATTTGATGATTGTTGAAA - >AT5G40280.1
ATGCCAGTAGTAACCCGCTTGATTCGTTTGAAGTGTGTAGGGCTCAGACTTGACCGGAGTGGACTCAATCGGCGAATCTGTCACGGAGGACACGGGGAATCAACGCGGCGGAGAGTGATGGAAGAGCTTTCAAGCCTAACCGTGAGTCAGCGCGAGCAATTTCTGGTGGAGAACGATGTGTTCGGGATCTATAATTACTTCGACGCCAGCGACGTTTCTACTCAAAAATACATGATGGAGATTCAGCGAGATAAGCAATTGGATTATCTGATGAAAGGCTTAAGGCAGCTTGGTCCGCAGTTTTCTTCCTTAGATGCTAATCGACCTTGGCTTTGTTACTGGATTCTTCATTCAATAGCTTTGCTTGGGGAGACTGTGGATGATGAATTAGAAAGCAATGCCATTGACTTCCTTGGACGCTGCCAGGGCTCTGAAGGTGGATACGGTGGTGGTCCTGGCCAACTTCCACATCTTGCAACTACTTATGCTGCAGTGAATGCACTTGTTACTTTAGGAGGTGACAAAGCCCTTTCTTCAATTAATAGGTGGTGCATTCTTTTTTCTTTGTGGTCAGTTTCTTTTATTAAGAGTCTAGTGATGTTTCCTCTAGAATACTTACATGTGACTCATTCTTCTTTCAGAGAAAAAATGTCTTGTTTTTTAAGACGGATGAAGGATACAAGTGGAGGTTTCAGGATGCATGATATGGGAGAAATGGATGTTCGTGCATGCTACACTGCAATTTCGGTTGCAAGCATCCTAAATATTATGGATGATGAACTCACCCAGGGCCTAGGAGATTACATCTTGAGTTGCCAAACTTATGAAGGTGGCATTGGAGGGGAACCTGGCTCCGAAGCTCACGGTGGGTATACCTACTGTGGTTTGGCTGCTATGATTTTAATCAATGAGGTCGACCGTTTGAATTTGGATTCATTAATGAATTGGGCTGTACATCGACAAGGAGTAGAAATGGGATTTCAAGGTAGGACGAACAAATTGGTCGATGGTTGCTACACATTTTGGCAGGCAGCCCCTTGTGTTCTACTACAAAGATTATATTCAACCAATGATCATGACGTTCATGGATCATCACATATATCAGAAGGGACAAATGAAGAACATCATGCTCATGATGAAGATGACCTTGAAGACAGTGATGATGATGATGATTCTGATGAGGACAACGATGAAGATTCAGTGAATGGTCACAGAATCCATCATACATCCACCTACATTAACAGGAGAATGCAACTGGTTTTTGATAGCCTCGGCTTGCAGAGATATGTACTCTTGTGCTCTAAGATCCCTGACGGTGGATTCAGAGACAAGCCGAGGAAACCCCGTGACTTCTACCACACATGTTACTGCCTGAGCGGCTTGTCTGTGGCTCAGCACGCTTGGTTAAAAGACGAGGACACTCCTCCTTTGACTCGCGACATTATGGGTGGCTACTCGAATCTCCTTGAACCTGTTCAACTTCTTCACAACATTGTCATGGATCAGTATAATGAAGCTATCGAGTTCTTCTTTAAAGCAGCATGACCCGTTGTTGCTAATGTATGGGAAACTCCAAACATAAGAGTTTTCGTAGTGTTGTAACTTGTAAGATTTCAAAAGAAGTTTCACTAATTTAACCTTAAAACCTGTTACTTTTTTATTACGTATATACCATTTATCATATCTTTGGTTTACGACTTAAAGAATTTGATGATTGTTGAAA
CDS Sequence
Protein Sequence