Information report for AT5G40200
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. DOI: 10.1104/pp.125.4.1912 ; PMID: 11299370
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Cross genome comparisons of serine proteases in Arabidopsis and rice. DOI: 10.1186/1471-2164-7-200 ; PMID: 16895613
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Deg proteases and their role in protein quality control and processing in different subcellular compartments of the plant cell. DOI: 10.1111/j.1399-3054.2011.01533.x ; PMID: 22008015
- The family of Deg/HtrA proteases in plants. DOI: 10.1186/1471-2229-12-52 ; PMID: 22520048
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- DEG9, a serine protease, modulates cytokinin and light signaling by regulating the level of ARABIDOPSIS RESPONSE REGULATOR 4. DOI: 10.1073/pnas.1601724113 ; PMID: 27274065
- The crystal structure of Deg9 reveals a novel octameric-type HtrA protease. DOI: 10.1038/s41477-017-0060-2 ; PMID: 29180814
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
Gene Resources
- UniProt: A0A654G6M5
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A654G6M5
- EnsemblPlants: AT5G40200.1
- Gramene: AT5G40200.1
- KEGG: ath:AT5G40200
- Orthologous matrix: HCEPNYS
- ExpressionAtlas: AT5G40200
- InterPro: IPR001478, IPR001940, IPR009003
- PANTHER: PTHR45980, PTHR45980:SF18
- SUPFAM: SSF50156, SSF50494
- Gene3D: 2.30.42.10, 2.40.10.10, 3.20.190.20
- OrthoDB: A0A654G6M5
- SWISS-MODEL: A0A654G6M5
Sequences
cDNA Sequence
- >AT5G40200.1
TGGTTTTAACCTAATGATGGCTTGGGTTAACATAATTATAATTCAGTAATTAGAAGCCCAATATCGTTATTGGGCCTAACTTCAGGCCCATTTGTCTTATATTCAGGCACGACGGGACAATGATCGCCGTTTCTTACAACCACTCTCCGATTATAAACCCTAGCCGCGTCTTCTTGCAAATTTCAATTTCAATTTCACTGAGAAGTTACAATCCAGAGGAAAAGATTATCTTTTTCCTTCTGGGTTGAGGGAAAAGATGAAGAATTCTGAGAAGAGAGGACGTAAACACAAAAGGCAAGATGCTTCATCGGCGGAAAACGCCGGCGGCGAAGTTAAAGAAGCTTCGGCTAATGAAGCATCGTTACCTCAATCCCCTGAGCCTGTTTCAGCTTCTGAAGCCAACCCATCTCCGTCGCGACGCAGTCGTGGGAGAGGTAAAAAGCGTAGATTGAACAATGAATCAGAAGCTGGTAACCAGAGGACGTCGTCACCAGAGCGTAGTAGATCTCGTCTTCATCACTCTGATACGAAGAATGGTGATTGTAGCAATGGGATGATTGTTTCAACAACTACTGAATCGATTCCCGCTGCTCCGAGTTGGGAAACTGTTGTTAAAGTTGTTCCTTCAATGGATGCTGTTGTTAAAGTCTTTTGTGTTCACACTGAGCCTAATTTCTCGTTGCCATGGCAAAGGAAACGACAGTATAGTTCTGGTAGTAGTGGTTTTATTATTGGGGGAAGAAGAGTTTTGACTAATGCACATTCTGTTGAGCATCATACTCAAGTTAAACTCAAGAAGCGTGGCTCTGATACTAAGTATTTGGCTACAGTCTTGGCCATTGGAACTGAATGTGACATTGCTTTGTTGACAGTTACGGATGATGAGTTTTGGGAAGGAGTATCTCCTGTGGAGTTTGGTGATTTACCAGCTTTGCAAGATGCTGTTACTGTTGTTGGTTATCCAATTGGTGGTGATACAATCTCTGTCACAAGCGGTGTTGTTTCCCGGATGGAGATATTGTCGTATGTGCATGGATCAACCGAGCTTTTGGGATTGCAGATTGATGCAGCTATTAATTCTGGGAATTCTGGTGGTCCTGCATTTAATGATAAAGGAAAATGTGTTGGTATTGCATTTCAGTCTTTGAAACACGAAGATGCTGAGAATATTGGTTATGTCATTCCCACACCGGTGATTGTACATTTCATTCAAGATTATGAGAAGCATGATAAATACACAGGGTTTCCTGTTCTCGGAATTGAGTGGCAAAAGATGGAAAATCCTGATTTGCGGAAGTCAATGGGTATGGAATCTCATCAAAAGGGAGTGCGGATTAGAAGAATTGAGCCAACCGCCCCAGAATCACAAGTTTTGAAGCCGTCTGATATTATCCTTAGTTTTGATGGAGTTAATATCGCTAATGATGGGACTGTTCCATTTAGGCATGGAGAACGAATTGGCTTTAGCTACCTTATATCCCAAAAGTACACTGGAGATTCTGCTCTCGTGAAGGTTCTACGAAACAAAGAAATATTAGAGTTCAACATAAAACTTGCAATCCACAAGAGGCTAATCCCTGCTCACATAAGTGGCAAACCTCCTTCGTACTTCATCGTTGCTGGCTTTGTATTTACAACTGTCTCTGTTCCATATCTTCGATCTGAGTATGGAAAAGAATATGAATTTGACGCACCTGTCAAGCTATTGGAGAAACATCTTCATGCAATGGCTCAATCCGTGGACGAGCAGCTTGTTGTAGTTTCACAGGTTCTTGTTTCTGACATTAACATTGGTTATGAAGAGATTGTCAACACCCAGGTTGTCGCCTTTAATGGCAAACCTGTGAAAAACTTGAAAGGTTTAGCTGGGATGGTGGAGAATTGTGAGGATGAATATATGAAGTTTAATCTGGATTATGATCAGATTGTTGTTCTGGACACTAAGACAGCAAAGGAAGCAACATTAGATATTCTGACCACACATTGCATACCTTCTGCTATGTCTGATGATCTCAAGACTGAAGAAAGAAACTGAAACAGAAGGAACCATAACCAGAAGGAGAGAAAGAGAGATTTTTGTCCATGGAAGGACATAAAAGCAAATACAGTCATGGAAAGACAAAGAGAAGCTCAAACCATAATTTGATTTTTCTTGATTCTGTTTTGTATTTGGAAAAATATGCAAGAAGAAATACATTGGTTATTTTTTCTCTCATTTATTTTCTTTGAAGTTTGAACTTGGTAGAACAATCATATATATCCACACAAAAAAAGTATGCAAAAAGAAAGTGAAATGGATGAGATATAATCATAGGTTCTTC
CDS Sequence
Protein Sequence