Gene Details:

• Gene ID: AT5G39860
• Gene Symbol: BHLH136, BNQ1, PRE1
• Gene Name: BASIC HELIX-LOOP-HELIX PROTEIN 136, BANQUO 1, PACLOBUTRAZOL RESISTANCE1
• Description: basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11)
• TAIR Accession: locus:2178002
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G39860.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0005515  — enables — protein binding
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0005634  — located in — nucleus
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0040008  — involved in — regulation of growth
• GO:0009741  — acts upstream of or within — response to brassinosteroid
• GO:0009640  — acts upstream of or within — photomorphogenesis
• GO:0048510  — acts upstream of or within — regulation of timing of transition from vegetative to reproductive phase
• GO:0009826  — acts upstream of or within — unidimensional cell growth
• GO:0046983  — enables — protein dimerization activity

Function-related keywords:

• root

Literature:

• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.   DOI:  10.1105/tpc.151140 ;  PMID:  14600211
• A global survey of gene regulation during cold acclimation in Arabidopsis thaliana.   DOI:  10.1371/journal.pgen.0010026 ;  PMID:  16121258
• Overexpression of PRE1 and its homologous genes activates Gibberellin-dependent responses in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcj026 ;  PMID:  16527868
• KIDARI, encoding a non-DNA Binding bHLH protein, represses light signal transduction in Arabidopsis thaliana.   DOI:  10.1007/s11103-006-0010-2 ;  PMID:  16786307
• Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis.   DOI:  10.1104/pp.106.082289 ;  PMID:  16920880
• Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance.   DOI:  10.1104/pp.107.098293 ;  PMID:  17478635
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Regulation of Arabidopsis brassinosteroid signaling by atypical basic helix-loop-helix proteins.   DOI:  10.1105/tpc.109.072504 ;  PMID:  20023194
• Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis.   DOI:  10.1105/tpc.109.070441 ;  PMID:  20009022
• The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling.   DOI:  10.1105/tpc.109.065946 ;  PMID:  20305124
• The non-DNA-binding bHLH transcription factor PRE3/bHLH135/ATBS1/TMO7 is involved in the regulation of light signaling pathway in Arabidopsis.   DOI:  10.1111/j.1399-3054.2012.01600.x ;  PMID:  22339648
• A survey of dominant mutations in Arabidopsis thaliana.   DOI:  10.1016/j.tplants.2012.08.006 ;  PMID:  22995285
• A triantagonistic basic helix-loop-helix system regulates cell elongation in Arabidopsis.   DOI:  10.1105/tpc.112.105023 ;  PMID:  23161888
• A triple helix-loop-helix/basic helix-loop-helix cascade controls cell elongation downstream of multiple hormonal and environmental signaling pathways in Arabidopsis.   DOI:  10.1105/tpc.112.105163 ;  PMID:  23221598
• ATBS1 INTERACTING FACTORs negatively regulate Arabidopsis cell elongation in the triantagonistic bHLH system.   DOI:  10.4161/psb.23448 ;  PMID:  23333962
• Interactions between HLH and bHLH factors modulate light-regulated plant development.   DOI:  10.1093/mp/sss011 ;  PMID:  22331621
• Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1.   DOI:  10.1104/pp.113.234625 ;  PMID:  24443525
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• The G-Box Transcriptional Regulatory Code in Arabidopsis.   DOI:  10.1104/pp.17.01086 ;  PMID:  28864470
• Linking PHYTOCHROME-INTERACTING FACTOR to Histone Modification in Plant Shade Avoidance.   DOI:  10.1104/pp.17.01189 ;  PMID:  29187567
• PACLOBUTRAZOL-RESISTANCE Gene Family Regulates Floral Organ Growth with Unequal Genetic Redundancy in Arabidopsis thaliana.   DOI:  10.3390/ijms20040869 ;  PMID:  30781591
• Class I TCP Transcription Factors Target the Gibberellin Biosynthesis Gene GA20ox1 and the Growth-Promoting Genes HBI1 and PRE6 during Thermomorphogenic Growth in Arabidopsis.   DOI:  10.1093/pcp/pcz137 ;  PMID:  31292642
• Phospho-Mutant Activity Assays Provide Evidence for the Negative Regulation of Transcriptional Regulator PRE1 by Phosphorylation.   DOI:  10.3390/ijms21239183 ;  PMID:  33276448
• MiR160 and its target genes ARF10, ARF16 and ARF17 modulate hypocotyl elongation in a light, BRZ, or PAC-dependent manner in Arabidopsis: miR160 promotes hypocotyl elongation.   DOI:  10.1016/j.plantsci.2020.110686 ;  PMID:  33487334
• Arabidopsis NF-YCs play dual roles in repressing brassinosteroid biosynthesis and signaling during light-regulated hypocotyl elongation.   DOI:  10.1093/plcell/koab112 ;  PMID:  33871651
• Overexpression of HLH4 Inhibits Cell Elongation and Anthocyanin Biosynthesis in Arabidopsis thaliana.   DOI:  10.3390/cells11071087 ;  PMID:  35406652
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534

Sequences: