Gene Details:
- Gene ID: AT5G39850
- Gene Symbol: uS4y
- Gene Name: Ribosomal Protein uS4y
- Description: Ribosomal protein S4;(source:Araport11)
- TAIR Accession: locus:2178082
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0009506 — located in — plasmodesma
- GO:0009507 — located in — chloroplast
- GO:0042274 — involved in — ribosomal small subunit biogenesis
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0003729 — enables — mRNA binding
- GO:0005515 — enables — protein binding
- GO:0009536 — located in — plastid
- GO:0019843 — enables — rRNA binding
- GO:0006412 — involved in — translation
- GO:0003735 — enables — structural constituent of ribosome
Function-related keywords:
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis. DOI: 10.1111/j.1365-313X.2006.02681.x ; PMID: 16623895
- An analysis of expressed sequence tags of developing castor endosperm using a full-length cDNA library. DOI: 10.1186/1471-2229-7-42 ; PMID: 17672910
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- An analysis of expressed sequence tags of developing castor endosperm using a full-length cDNA library. DOI: 10.1186/1471-2229-7-42 ; PMID: 17672910
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Sequences:
cDNA Sequence
- >AT5G39850.1
AAAAAGCCCAATGGGCCAACCCAACCAAAAGAAATCATTTGAGGCCTTAAGACCCTCTAGGTTTTTCATAGTCGTGTAATATAAAAAGCACTTCGTCTTCATCGTCGCGATCAACTCTGTCTTAGTTTTGAGCAGCAGCAGCTATGGTTAACGTCAGATTCTACCGAAACTATGGGAAAACATTCAAGAAGCCACGTCGTCCTTATGAGAAAGAGCGTCTTGATGCTGAGCTAAAGCTTGTTGGAGAATACGGTCTTCGTTGTAAGAGAGAGCTTTGGAGAGTTCAATATACACTTAGCAGAATCCGTAATGCTGCAAGAGAACTCTTAACTCTTGATGAGAAGAATCCTCGTCGTATCTTTGAAGGTGAAGCTCTTCTTAGGAGAATGAATCGATATGGTCTTCTTGATGAAACCCAGAACAAGCTTGATTATGTTCTTGCTTTGACTGTTGAGAATTTCCTTGAACGTCGTCTCCAAACTATTGTCTTTAAGTCTGGTATGGCTAAGTCCATTCACCACGCTCGTGTCCTTATCCGACAAAGGCATATCAGGGTTGGGAGGCAACTTGTGAACATTCCATCGTTTATGGTGAGAGTAGAGTCACAGAAGCACGTAGACTTTTCTCTAACCAGTCCATTCGGTGGTGGTCGACCTGGAAGAGTGAAGAGAAGGAACGAGAGAGCCGGAGCTAAGAAAGCTTCTGGTGGTGATGGAGATGAGGATGATGAAGAGTGAAAAGTACCAAACCCTTAAAAAAATCCCTAAGATGAAACACTACCTAGCTAAACCTATCAAAATGCTTTTAGTTGATAATAGTTTGGTTTTGTTACCTCTTTTTGTGAGATATTTGGTTTGTTAGTGTTCTTAATTAGTAGTAGAAGTGAAGTGTTTTTTTTTTTTTTTATAATGTTTTGGACCTTGTGTTCTTGAACCATGTCACTTTCGAATCTTGCTTCTTATAAGATACTAGTAGTTGATATTATTATGTCCGGTCACTTTGCTTACAAGCAAAACGCTTAAACAATAAAGTAGTTTAATA
CDS Sequence
Protein Sequence