Gene Details:

• Gene ID: AT5G39830
• Gene Symbol: DEG8, DEGP8
• Gene Name: degradation of periplasmic proteins 8, DEG PROTEASE 8
• Description: Trypsin family protein with PDZ domain-containing protein;(source:Araport11)
• TAIR Accession: locus:2151916
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G39830.1     AT5G39830.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0009543  — located in — chloroplast thylakoid lumen
• GO:0008233  — enables — peptidase activity
• GO:0006508  — involved in — proteolysis
• GO:0009534  — located in — chloroplast thylakoid
• GO:0004252  — enables — serine-type endopeptidase activity
• GO:0009507  — located in — chloroplast
• GO:0009579  — located in — thylakoid
• GO:0031977  — located in — thylakoid lumen
• GO:0009536  — located in — plastid
• GO:0010206  — acts upstream of or within — photosystem II repair
• GO:0005634  — located in — nucleus

Function-related keywords:

• root

Literature:

• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature.   DOI:  10.1104/pp.125.4.1912 ;  PMID:  11299370
• The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts.   DOI:  10.1007/s00294-002-0309-8 ;  PMID:  12185496
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Cross genome comparisons of serine proteases in Arabidopsis and rice.   DOI:  10.1186/1471-2164-7-200 ;  PMID:  16895613
• Protease gene families in Populus and Arabidopsis.   DOI:  10.1186/1471-2229-6-30 ;  PMID:  17181860
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Deg proteases and their role in protein quality control and processing in different subcellular compartments of the plant cell.   DOI:  10.1111/j.1399-3054.2011.01533.x ;  PMID:  22008015
• The family of Deg/HtrA proteases in plants.   DOI:  10.1186/1471-2229-12-52 ;  PMID:  22520048
• Cooperative D1 degradation in the photosystem II repair mediated by chloroplastic proteases in Arabidopsis.   DOI:  10.1104/pp.112.199042 ;  PMID:  22698923
• Phosphorylation of photosystem II core proteins prevents undesirable cleavage of D1 and contributes to the fine-tuned repair of photosystem II.   DOI:  10.1111/tpj.12562 ;  PMID:  24862025
• Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family.   DOI:  10.3389/fpls.2014.00396 ;  PMID:  25161662
• Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis.   DOI:  10.3389/fpls.2016.00168 ;  PMID:  26909098
• Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops.   DOI:  10.1093/jxb/erw365 ;  PMID:  27707774
• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: