Information report for AT5G39760
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005515 — enables — protein binding
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0001173 — acts upstream of or within — DNA-templated transcriptional start site selection
- GO:0009739 — involved in — response to gibberellin
- GO:0042803 — enables — protein homodimerization activity
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
- GO:0003677 — enables — DNA binding
- GO:0009637 — acts upstream of or within — response to blue light
- GO:0008134 — enables — transcription factor binding
- GO:0003700 — enables — DNA-binding transcription factor activity
Literature and News
- Characterization of a novel class of plant homeodomain proteins that bind to the C4 phosphoenolpyruvate carboxylase gene of Flaveria trinervia. DOI: 10.1023/a:1006450005648 ; PMID: 11289511
- The Arabidopsis zinc finger-homeodomain genes encode proteins with unique biochemical properties that are coordinately expressed during floral development. DOI: 10.1104/pp.105.070565 ; PMID: 16428600
- Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments. DOI: 10.1186/1471-2164-8-112 ; PMID: 17474978
- Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor in Arabidopsis. DOI: 10.1074/jbc.M110.167692 ; PMID: 21059647
- Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology. DOI: 10.4161/psb.28211 ; PMID: 24614501
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis. DOI: 10.3390/plants2040769 ; PMID: 27137403
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Characterization of a novel class of plant homeodomain proteins that bind to the C4 phosphoenolpyruvate carboxylase gene of Flaveria trinervia. DOI: 10.1023/a:1006450005648 ; PMID: 11289511
- ATHB23, an Arabidopsis class I homeodomain-leucine zipper gene, is expressed in the adaxial region of young leaves. DOI: 10.1007/s00299-007-0340-9 ; PMID: 17387478
Gene Resources
- UniProt: A0A654G6H4
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A654G6H4
- EnsemblPlants: AT5G39760.1
- Gramene: AT5G39760.1
- KEGG: ath:AT5G39760
- Orthologous matrix: LKRHHAN
- ExpressionAtlas: AT5G39760
- InterPro: IPR006455, IPR006456, IPR009057
- PANTHER: PTHR31948, PTHR31948:SF72
- SUPFAM: SSF46689
- PROSITE: PS51523
- Gene3D: 1.10.10.60
- OrthoDB: A0A654G6H4
- SWISS-MODEL: A0A654G6H4
Sequences
cDNA Sequence
- >AT5G39760.1
GGAAAATATGTAATATTAAAAAATCTCCAACAGCTTAAGAAGTTAGAACCTTTTTACTTATCTTTATTTCTTCTTCTTCTTCATTTTTCTATTCACATTCTCTGAAACTCATACCATATTTTCAAAGCTCTTAACCCAAAAACCCTAAGTCTTTTTTTTCTTCAAATTATTGGTTATATTAATGTTTTAAGCTATGATGGATATGACTCCTACAATAACAACAACAACAACACCAACTCCTAAATCACCCGAACCCGAATCCGAAACTCCGACCCGGATCCAACCGGCGAAACCCATTTCCTTTAGCAACGGCATCATCAAACGCCACCACCACCACCACCATCCTCTCCTCTTTACTTACAAAGAATGTCTCAAAAACCACGCGGCGGCTTTAGGTGGTCACGCTCTCGACGGTTGCGGCGAATTCATGCCGTCTCCGTCGTCAATCTCCTCCGATCCAACTTCTCTCAAATGTGCTGCTTGTGGCTGCCACCGTAATTTCCACCGCCGTGATCCAGATAACAACAACGACTCTTCCCAAATCCCTCCTCCTCCTTCCACCGCCGTAGAGTATCAACCTCACCACCGTCATCATCCACCACCACCACCACCTCCTCCACCACCACGTAGTCCTAACTCAGCTTCTCCTCCACCAATCTCTTCCTCTTACATGCTCTTATCTCTCTCCGGTACTAATAACAACAACAACAACTTAGCTTCTTTCTCCGATCTTAACTTCTCCGCCGGAAACAACCACCACCACCACCACCAACATACTCTTCACGGATCTCGTAAAAGATTCCGAACAAAATTCAGCCAGTTTCAGAAAGAGAAGATGCATGAATTCGCCGAACGTGTTGGTTGGAAGATGCAAAAACGTGACGAAGACGATGTTCGTGATTTTTGCCGGCAGATCGGAGTTGATAAAAGTGTTCTCAAAGTTTGGATGCATAACAACAAAAACACCTTTAACCGCCGTGATATCGCCGGAAACGAGATCCGGCAAATCGATAACGGCGGAGGAAACCACACTCCGATTCTCGCCGGCGAGATTAATAACCATAACAATGGACACCACGGTGTCGGAGGAGGAGGAGAGCTTCACCAGAGTGTTAGTAGCGGCGGTGGTGGCGGAGGATTTGATAGTGATAGCGGCGGAGCTAACGGTGGTAACGTTAACGGATCATCGTCGTCGTGAAGTTAAAGATGAGAGTGTCAGGTTAATAAGAAGCTTAGAGTAAGCTTATTCGTATTATCATCGTTAATAACTTTCTATTAAATATTAATTAAGATCTTTAGCTTTGTTTGTTTTTGCATTATTATTAGTTTTGATTTAATGTTCTTTACCACGTCGGTGTCTCGCTCGATGAGGAATAATACCATAACAATGTTCGAATTATATCATTTGTTGTAAACATTTCTATTAATGAACCCTGAAATGTGACTAAGTACTCCAATAAATGGTACACTTTTGATGTGGTAATCTTGTTTCGGATGAAGAAACAAAAAGA
CDS Sequence
Protein Sequence