Information report for AT5G39670
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis. DOI: 10.1074/jbc.M313350200 ; PMID: 14722088
- Transcriptome analysis of O3-exposed Arabidopsis reveals that multiple signal pathways act mutually antagonistically to induce gene expression. DOI: 10.1023/B:PLAN.0000019064.55734.52 ; PMID: 15010611
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Drought tolerance established by enhanced expression of the CC-NBS-LRR gene, ADR1, requires salicylic acid, EDS1 and ABI1. DOI: 10.1111/j.1365-313X.2004.02086.x ; PMID: 15144382
- The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis. DOI: 10.1104/pp.105.068254 ; PMID: 16183833
- 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. DOI: 10.1104/pp.105.067058 ; PMID: 16258017
- Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis. DOI: 10.1111/j.1365-313X.2006.02782.x ; PMID: 16792696
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana. DOI: 10.1534/genetics.106.061374 ; PMID: 17028338
- Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. DOI: 10.1073/pnas.0611615104 ; PMID: 17360592
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Different Modes of Negative Regulation of Plant Immunity by Calmodulin-Related Genes. DOI: 10.1104/pp.17.01209 ; PMID: 29449432
Gene Resources
- UniProt: A0A178UPR1
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178UPR1
- EnsemblPlants: AT5G39670.1
- Gramene: AT5G39670.1
- KEGG: ath:AT5G39670
- Orthologous matrix: FMEASFC
- ExpressionAtlas: AT5G39670
- InterPro: IPR002048, IPR011992, IPR018247
- PANTHER: PTHR10891
- SUPFAM: SSF47473
- PROSITE: PS00018, PS50222
- Gene3D: 1.10.238.10
- SWISS-MODEL: A0A178UPR1
- Conserved Domain Database: cd00051
Sequences
cDNA Sequence
- >AT5G39670.1
ATATCTCCAACATCTCCTCCAAAACATTCTTTTCCTTGTGATTCATTATTTTGCCTAGTTTTACTTTTCAAATAGACTTCTAACAAAAGTTATGACTGAAAACCAATTATATAGCTTTATAACCATGAAGAGTTCATTGTCTAAATGCAAACAGTCTTCTTCTTTGTCTTTCCCTTTGTTTGGTCTGATCAACTTCTTCCTCATCGGTTTTTTCAGATGGGTTTCTTTTGCTCAGTTATTTTTCTCTAGGTTCTGGCCTCTTGTTCAACACCAGCAATGTGTTTCCGAGAAGAAGAGCAAAGATCTTGAGTTCCAAACTTCGATCAAACACGAAGAATATCGTGATGATGATGATGATGGTCTTTGCAGAGAAGATGTAGGGATGGTTATGAAAAGCTTAGGGCTTTCCACTGACCAAGAAAACGAGGGACTTCAAAAACAGTACAGTTCCAAGGAGGTTTCGAATCTGTTCGAAGAGAAAGAGCCAAGCTTAGAGGAAGTGAAGCAAGCTTTTGATGTCTTTGATGAAAACAGAGATGGGTTTATCGATCCTATAGATTTGCAGAGAGTTTTGACAATCCTTGGCTTAAAGCAAGGATCTAACCTTGAGAACTGCAGGAGAATGATCAGATCATTCGATGGAAGTAAAGACGGAAGAATCGATTTCTATGGATTTGTGAAATTCATGGAGAACAACTTCTGCTGAAATCGTATTTCCTTAAAGTATCAATTTCTGCACTTCTTTTCTTCTTGCTTTGAGATTGTGTCTGTTAATACTGTTGTCTCCGCACCTTGTATAAACTACCAAACTTTCATATCAAAAGCTCTGCTATAGAGCGTAAAAACCAATGAGTTTGGAAATAATTGTCACAGACATGAATAATCTGCC
CDS Sequence
Protein Sequence