Information report for AT5G39660
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The Dof family of plant transcription factors. DOI: 10.1016/s1360-1385(02)02362-2 ; PMID: 12475498
- Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families. DOI: 10.1186/1471-2148-3-17 ; PMID: 12877745
- Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism. DOI: 10.1105/tpc.104.023705 ; PMID: 15377757
- FKF1 F-box protein mediates cyclic degradation of a repressor of CONSTANS in Arabidopsis. DOI: 10.1126/science.1110586 ; PMID: 16002617
- Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. DOI: 10.1186/1471-2164-8-304 ; PMID: 17764576
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- Comparative transcriptomics of Arabidopsis sperm cells. DOI: 10.1104/pp.108.125229 ; PMID: 18667720
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. DOI: 10.1016/j.devcel.2009.06.015 ; PMID: 19619493
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Identification of Arabidopsis SUMO-interacting proteins that regulate chromatin activity and developmental transitions. DOI: 10.1073/pnas.1319985110 ; PMID: 24255109
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- The Roles of Arabidopsis CDF2 in Transcriptional and Posttranscriptional Regulation of Primary MicroRNAs. DOI: 10.1371/journal.pgen.1005598 ; PMID: 26473486
- Regulation of Plant Microprocessor Function in Shaping microRNA Landscape. DOI: 10.3389/fpls.2018.00753 ; PMID: 29922322
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- PIF4 enhances DNA binding of CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. DOI: 10.1038/s41477-022-01213-y ; PMID: 35970973
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A654G7F8
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G7F8
- EnsemblPlants: AT5G39660.1, AT5G39660.2, AT5G39660.3
- Gramene: AT5G39660.1, AT5G39660.2, AT5G39660.3
- KEGG: ath:AT5G39660
Sequences
cDNA Sequence
- >AT5G39660.2
AAAGACAAAAAAGCATTCCCAATTAACAAATCTAGAAATCAAAACTCAGACAACCACCGATAACAAGACAGTCGTTTCTCTCTCTCTTTTAAACAAATAAAAATTGGAACTTTTTTCCTCTGTCTTCTCAAAAAGTTTCCGCTTTTTGCTCGCTGGAGAAGAAAGAAAGAAAGAAGTGAAAAGGAATCATTACCATGGCTGATCCGGCGATTAAGCTCTTTGGAAAGACGATTCCTTTACCTGAGCTTGGTGTTGTTGATTCTTCTTCTAGCTATACCGGATTTTTAACCGAAACTCAGATTCCTGTTCGGTTATCAGATTCGTGTACCGGCGATGATGATGATGAAGAGATGGGTGATTCCGGTTTAGGACGAGAAGAAGGTGATGATGTTGGTGATGGTGGAGGAGAGAGCGAGACTGATAAAAAGGAAGAAAAAGATAGTGAGTGTCAGGAAGAGTCATTGAGGAATGAATCTAATGATGTTACTACTACTACATCGGGTATAACTGAAAAAACGGAAACAACAAAAGCTGCAAAGACGAATGAAGAGTCAGGTGGTACTGCTTGCTCTCAAGAGGGGAAGTTAAAGAAACCTGATAAGATTCTACCGTGTCCGCGATGTAACAGCATGGAAACCAAGTTCTGTTACTACAACAACTATAATGTTAACCAACCTCGCCATTTCTGCAAGAAATGTCAGAGATATTGGACAGCTGGTGGAACGATGAGGAATGTTCCGGTTGGTGCTGGGAGACGTAAGAATAAGAGTCCAGCTTCTCATTATAACCGTCATGTAAGTATAACATCTGCGGAAGCTATGCAGAAGGTGGCGAGAACTGATCTTCAACATCCTAATGGTGCAAATCTTCTCACTTTTGGCTCTGATTCTGTGCTTTGTGAATCTATGGCTTCTGGATTGAATCTTGTTGAGAAGTCATTGTTGAAGACACAAACTGTATTGCAAGAACCCAATGAAGGCTTGAAGATTACGGTTCCGTTAAACCAGACAAACGAAGAAGCTGGAACAGTCAGCCCGTTACCAAAAGTTCCATGCTTTCCAGGACCACCACCAACTTGGCCTTACGCTTGGAACGGAGTTTCGTGGACGATTTTACCGTTTTACCCTCCACCGGCTTACTGGAGCTGCCCGGGGGTTTCACCGGGGGCATGGAACAGCTTCACATGGATGCCACAACCCAATTCACCATCTGGTTCCAATCCAAATTCTCCTACACTAGGTAAACATTCACGTGACGAGAACGCTGCTGAACCAGGAACCGCTTTTGATGAAACCGAGTCACTTGGTAGGGAGAAAAGCAAACCCGAGAGATGCTTGTGGGTTCCCAAGACGCTGAGGATTGATGATCCAGAGGAAGCTGCTAAAAGTTCCATCTGGGAAACATTAGGGATCAAAAAAGACGAAAATGCGGATACTTTCGGAGCTTTCAGATCATCAACCAAAGAAAAAAGCAGTCTTTCTGAAGGAAGACTTCCGGGAAGAAGACCGGAGTTGCAAGCGAATCCTGCTGCTCTTTCTAGGTCAGCAAACTTCCATGAGAGCTCATAGAAAGAAGAAGAATCTAAGCAGCTGATTTGATTGTTTTTGGGTTCAGTCTTGTGTTCCAAGAAAGCAGTAGTAGTGGCAGCAACAAGCTTGTTTTCGGCATCCGCGGAGGAGCGAACCACTGTCTTCAACTTCTTAGATGACCGCGATGTCAAGTGTTTACCATGGTAAATCAGGTTTGCTTTAGTAGATGTGTAGTCATTCTTATAACCAGTCCAAAAATCACCCAACAAAGACATGAACCAAGTCTCGAAAAAGCAAGCCGCGATCACCAATACTGCGAAAATAACGCAAACACAGCTTCTTCACTGCAAGCAAATGGTCATGGTTGATGCATGAATGGAGAGTCTATTGACAACATACATAAGCAAAAGCAATGTGGTAGATGCATGAAGAGAAGATATTGCAAGCTGCCAACTACGGTTCGATATTTGTATAATCTAGGATTAAAAATATTAAAGAAACCACACTAAATGGATTGACAAAGTCAGCTATATCAGAAGATTTATCGTCTATTGACCAAAAC - >AT5G39660.1
AAAGACAAAAAAGCATTCCCAATTAACAAATCTAGAAATCAAAACTCAGACAACCACCGATAACAAGACAGTCGTTTCTCTCTCTCTTTTAAACAAATAAAAATTGGAACTTTTTTCCTCTGTCTTCTCAAAAAGTTTCCGCTTTTTGCTCGCTGGAGAAGAAAGAAAGAAAGAAGTGAAAAGGAATCATTACCATGGCTGATCCGGCGATTAAGCTCTTTGGAAAGACGATTCCTTTACCTGAGCTTGGTGTTGTTGATTCTTCTTCTAGCTATACCGGATTTTTAACCGAAACTCAGATTCCTGTTCGGTTATCAGATTCGTGTACCGGCGATGATGATGATGAAGAGATGGGTGATTCCGGTTTAGGACGAGAAGAAGGTGATGATGTTGGTGATGGTGGAGGAGAGAGCGAGACTGATAAAAAGGAAGAAAAAGATAGTGAGTGTCAGGAAGAGTCATTGAGGAATGAATCTAATGATGTTACTACTACTACATCGGGTATAACTGAAAAAACGGAAACAACAAAAGCTGCAAAGACGAATGAAGAGTCAGGTGGTACTGCTTGCTCTCAAGAGGGGAAGTTAAAGAAACCTGATAAGATTCTACCGTGTCCGCGATGTAACAGCATGGAAACCAAGTTCTGTTACTACAACAACTATAATGTTAACCAACCTCGCCATTTCTGCAAGAAATGTCAGAGATATTGGACAGCTGGTGGAACGATGAGGAATGTTCCGGTTGGTGCTGGGAGACGTAAGAATAAGAGTCCAGCTTCTCATTATAACCGTCATGTAAGTATAACATCTGCGGAAGCTATGCAGAAGGTGGCGAGAACTGATCTTCAACATCCTAATGGTGCAAATCTTCTCACTTTTGGCTCTGATTCTGTGCTTTGTGAATCTATGGCTTCTGGATTGAATCTTGTTGAGAAGTCATTGTTGAAGACACAAACTGTATTGCAAGAACCCAATGAAGGCTTGAAGATTACGGTTCCGTTAAACCAGACAAACGAAGAAGCTGGAACAGTCAGCCCGTTACCAAAAGTTCCATGCTTTCCAGGACCACCACCAACTTGGCCTTACGCTTGGAACGGAGTTTCGTGGACGATTTTACCGTTTTACCCTCCACCGGCTTACTGGAGCTGCCCGGGGGTTTCACCGGGGGCATGGAACAGCTTCACATGGATGCCACAACCCAATTCACCATCTGGTTCCAATCCAAATTCTCCTACACTAGGTAAACATTCACGTGACGAGAACGCTGCTGAACCAGGAACCGCTTTTGATGAAACCGAGTCACTTGGTAGGGAGAAAAGCAAACCCGAGAGATGCTTGTGGGTTCCCAAGACGCTGAGGATTGATGATCCAGAGGAAGCTGCTAAAAGTTCCATCTGGGAAACATTAGGGATCAAAAAAGACGAAAATGCGGATACTTTCGGAGCTTTCAGATCATCAACCAAAGAAAAAAGCAGTCTTTCTGAAGGAAGACTTCCGGGAAGAAGACCGGAGTTGCAAGCGAATCCTGCTGCTCTTTCTAGGTCAGCAAACTTCCATGAGAGCTCATAGAAAGAAGAAGAATCTAAGCAGCTGATTTGATTGTTTTTGGGTTCAGTCTTGTGTTCCAAGAAAGCAGTAGTAGTGGCAGCAACAAGCTTGTTTTCGGCATCCGCGGAGGAGCGAACCACTGTCTTCAACTTCTTAGATGACCGCGATGTCAAGTGTTTACCATGGTAAATCAGGTTTGCTTTAGTAGATGTGTAGTCATTCTTATAACCAGTCCAAAAATCACCCAACAAAGACATGAACCAAGTCTCGAAAAAGCAAGCCGCGATCACCAATACTGCGAAAATAACGCAAACACAGCTTCTTCACTGCAAGCAAATGGTCATGGTTGATGCATGAATGGAGAGTCTATTGACAACATACATAAGCAAAAGCAATGTGGTAGATGCATGAAGAGAAGATATTGCAAGCTGCCAACTACGGTTCGATATTTGTATAATCTAGGATTAAAAATATTAAAGAAACCACACTAAATGGATTGACAAAGTCAGCTATATCAGAAGATTTATCGTCTATTGACCAAAAC - >AT5G39660.3
AAAGACAAAAAAGCATTCCCAATTAACAAATCTAGAAATCAAAACTCAGACAACCACCGATAACAAGACAGTCGTTTCTCTCTCTCTTTTAAACAAATAAAAATTGGAACTTTTTTCCTCTGTCTTCTCAAAAAGTTTCCGCTTTTTGCTCGCTGGAGAAGAAAGAAAGAAAGAAGTGAAAAGGAATCATTACCATGGCTGATCCGGCGATTAAGCTCTTTGGAAAGACGATTCCTTTACCTGAGCTTGGTGTTGTTGATTCTTCTTCTAGCTATACCGGATTTTTAACCGAAACTCAGATTCCTGTTCGGTTATCAGATTCGTGTACCGGCGATGATGATGATGAAGAGATGGGTGATTCCGGTTTAGGACGAGAAGAAGGTGATGATGTTGGTGATGGTGGAGGAGAGAGCGAGACTGATAAAAAGGAAGAAAAAGATAGTGAGTGTCAGGAAGAGTCATTGAGGAATGAATCTAATGATGTTACTACTACTACATCGGGTATAACTGAAAAAACGGAAACAACAAAAGCTGCAAAGACGAATGAAGAGTCAGGTGGTACTGCTTGCTCTCAAGAGGGGAAGTTAAAGAAACCTGATAAGATTCTACCGTGTCCGCGATGTAACAGCATGGAAACCAAGTTCTGTTACTACAACAACTATAATGTTAACCAACCTCGCCATTTCTGCAAGAAATGTCAGAGATATTGGACAGCTGGTGGAACGATGAGGAATGTTCCGGTTGGTGCTGGGAGACGTAAGAATAAGAGTCCAGCTTCTCATTATAACCGTCATGTAAGTATAACATCTGCGGAAGCTATGCAGAAGGTGGCGAGAACTGATCTTCAACATCCTAATGGTGCAAATCTTCTCACTTTTGGCTCTGATTCTGTGCTTTGTGAATCTATGGCTTCTGGATTGAATCTTGTTGAGAAGTCATTGTTGAAGACACAAACTGTATTGCAAGAACCCAATGAAGGCTTGAAGATTACGGTTCCGTTAAACCAGACAAACGAAGAAGCTGGAACAGTCAGCCCGTTACCAAAAGTTCCATGCTTTCCAGGACCACCACCAACTTGGCCTTACGCTTGGAACGGAGTTTCGTGGACGATTTTACCGTTTTACCCTCCACCGGCTTACTGGAGCTGCCCGGGGGTTTCACCGGGGGCATGGAACAGCTTCACATGGATGCCACAACCCAATTCACCATCTGGTTCCAATCCAAATTCTCCTACACTAGGTAAACATTCACGTGACGAGAACGCTGCTGAACCAGGAACCGCTTTTGATGAAACCGAGTCACTTGGTAGGGAGAAAAGCAAACCCGAGAGATGCTTGTGGGTTCCCAAGACGCTGAGGATTGATGATCCAGAGGAAGCTGCTAAAAGTTCCATCTGGGAAACATTAGGGATCAAAAAAGACGAAAATGCGGATACTTTCGGAGCTTTCAGATCATCAACCAAAGAAAAAAGCAGTCTTTCTGAAGGAAGACTTCCGGGAAGAAGACCGGAGTTGCAAGCGAATCCTGCTGCTCTTTCTAGGTCAGCAAACTTCCATGAGAGCTCATAGAAAGAAGAAGAATCTAAGCAGCTGATTTGATTGTTTTTGGGTTCAGTCTTGTGTTCCAAGAAAGCAGTAGTAGTGGCAGCAACAAGCTTGTTTTCGGCATCCGCGGAGGAGCGAACCACTGTCTTCAACTTCTTAGATGACCGCGATGTCAAGTGTTTACCATGGTAAATCAGGTTTGCTTTAGTAGATGTGTAGTCATTCTTATAACCAGTCCAAAAATCACCCAACAAAGACATGAACCAAGTCTCGAAAAAGCAAGCCGCGATCACCAATACTGCGAAAATAACGCAAACACAGCTTCTTCACTGCAAGCAAATGGTCATGGTTGATGCATGAATGGAGAGTCTATTGACAACATACATAAGCAAAAGCAATGTGGTAGATGCATGAAGAGAAGATATTGCAAGCTGCCAACTACGGTTCGATATTTGTATAATCTAGGATTAAAAATATTAAAGAAACCACACTAAATGGATTGACAAAGTCAGCTATATCAGAAGATTTATCGTCTATTGACCAAAAC
CDS Sequence
Protein Sequence