Information report for AT5G38880
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays. DOI: 10.1105/tpc.112.096610 ; PMID: 22505726
Gene Resources
- UniProt: A0A178U914
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178U914
- EnsemblPlants: AT5G38880.1
- Gramene: AT5G38880.1
- KEGG: ath:AT5G38880
- Orthologous matrix: YEGNGIC
- ExpressionAtlas: AT5G38880
- InterPro: IPR029131, IPR044706
- PANTHER: PTHR34968, PTHR34968:SF1
- SWISS-MODEL: A0A178U914
Sequences
cDNA Sequence
- >AT5G38880.1
CGCGGTTATTACCCAGTTTCAACTTTCAACAGTCGACGACACTTGCAGAAAAATTCGAGTTTGATTCCTTTAATTGAAAATCCAATAAACAAGCGGGACCTCGATTTGAAATCTCTTTATCCAGATCCATCTCTCCGTCACAATCTTCCATCTACCGTCACCGGAACCGGCGAGTTAGTCGTCGGGATTCCAGATCTGTTTGTCTACGTCTTCCTTCTGTCTCTGTGTTCATCAGAGTACCAATTCGCTCGATTGTTGCTGCATTTCGCGAATTGTATTAGGTTTATAGCGTCTATGAACTCCTGTTTTCGCTCGATTTGAGTAACCTAGGTATTTCTCTACGTTGATTGTTTGGATTTGAAGAAAAGGCGCAAAGTATGAGTAGAAATTTCGGAAGTTTCATGAAGATTTGAGGGATTGAGTTAGGTATTGTAGTTGTAGAGAGAATGCAGAGTTTATCGAGCTCGGCTCCGACACCGGAGGCGATATTAGAATGGTTACAGAAGGAAATGGGGTACAGGCAATTAGGTCCGTATAATGGATCGAGCAAATCTCATGTTCCTTCTATTGATGCTATAAGGAAGATTTGTAGAGGGAATATGATACCTATATGGAATTTTTTGATAAACCGAGTGAAATCGGAGAAGACAGTGGAGAGAATTAGGCGGAATATTACGGTTCATGGGGGAAGTAGTAATGCTAGCATTGGGAGTTCGGTAAATCCTGGGAAGGAGGAGAGTAAGAGTAAAGGAAGGCGGAAGGATAAGACAGTGACTGGTGAGAGTTCGAGTTATGCGGAGGATAGAGAAGCTGCATTGCAGGAAAGGGAATTAGCTGCAAAGGAAGTGGAGAGATTGAGGAACATAGTGAGGAGGCAAAGAAAAGATTTGAAAGCTAGAATGTTGGAGGTCTCTAGAGAAGAAGCAGAGCGGAAGAGGATGCTTGATGAAAGAGCAAATTACAGACACAAGCAAGCATTGTTGGAAGCGTATGATCAACAATGTGATGAAGCAACAAGAATATTTGCAGAGTATCACAAAAGGCTACAAGTCTATGTTAATCAAGCAAATGATGCACAACGGTCTGTCAATTCATCGAATGAAGTGTTAAGCAGCCTCAGTGCTAACAGTGAGAGGGAAGCTGTTTATTCCACTGTCAAAGGAACTAAGTCTGCAGATGATGTCATTCTCATGGAAACAACCCGAGAACGAAATATCAGGATAGTATGTGATTTGCTTGCATCACGCATGATTGAAAGAATACGTAACTCCTTCCCTGCATACGAAGGAAATGGAATTTGTTCACTTCCAGAGCTGGAAACTGCCAAGCTGGGTTTTGAGTATGATGGAGAAATAACTGATGAGATGAAAACTGTTATAGTAAATTCCCTGAGGGGTCCTCCTCTGCTGCTTCAGGCTATTGCTGCATACACTTTACGCATTAAGACTCTGATATCCAGAGAGATGGAGAAGATTGATGTCAGAGCAGATGCTGAAATGTTAAGGTATAAGTTTGAGAACAACCGTGTAACAGACAATTCTTCTTCTGATGTGAGCTCCCCTTTGAGTTATCAGTTTAATGGAAACGGGAAGATAGGCACAGATACTCATTTCCAAGGATCTAACAACCAGCTCCTTGAACGGCAGAAAGCCCATGTTCAACAATTTTTGGCTACTGAAGATGCACTAAACAAAGCAGCTGAAGCTCGTGATTTATGCCACAAGTTTATTAACCGTTTGCATGGAAGTGCTGATACAGCTACTCATTCGTTTGTTGGAGGCACAACACAGAGTGGTAGCAATCTTAGGCAATTTGAGTTGGATGTATGGGGAAAGGAAAGAGAAGCTGCTGGTTTGAGGGCTAGCTTAAACACATTGTTATCTGAAATACAACGGCTGAATAAATTATGTGCAGAAAGAAAAGAAGCCGAAGATTCCTTGAAAAAGAAGTGGAAGAAAATTGAGGAATTTGATGCTCGCAGATCCGAACTTGAAACCATATATACAACTCTTCTCAAGGCCAACATGGATGCTGTTGCATTCTGGAATCAACAACCACTAGCTGCAAGGGAATATGCATCAGCCACTGTAATTCCAGCCAGTGAAGTTGTTGTGGACATTTCAAACAGCGCAAAAGATTTCATTGAGAAAGAAGTGTCTGCTTTCTTTCAAAGTCCTGATAACAGTCTTTATATGCTTCCAGCAACTCCCCAGGGACTTCTGGAATCTATGGGAGCTAATGGATCGACGGGACCTGAAGCTGTTGCATATGCAGAGAAGAATGCTGCTCTATTAACGGCTAGAGCTGGTGCAAGAGATCCATCGGCAATACCATCTATATGTCGCATTTCTGCTGCCCTTCAATATCCTGCAGGTCTTGAGGGTTCAGATGCAAGTTTGGCCTCAGTGTTAGAGTCTCTTGAGTTCTGCTTAAGAGTTCGTGGTTCTGAAGCATGTGTTTTAGAAGACTTAGCAAAGGCAATCGATTTGGTCCATATTCGGCAGGATCTAGTTGAAAGTGGCCATTCTCTGTTAGATCATGCTTTCCGTGCCCAGCAAAAATATGAAAGAACAACTAACTACTGCCTAGATCTAGCTTCTGAACAAGAGAATACAATATCGGACCAGTGGTTACCTGAACTTAGGACTGCAGTTCAGAATGCGCAAGCTTCCTCGGAACACTGCAAATACGTTAGGGGTTTGCTTGATGAATGGTGGGAACAACCTGCATCAACAGTTGTGGATTGGGTCACTGTAGATGGTCAAAGTGTTGCAGCTTGGCAAAACCATGTCAAACAGCTTCTTGCCTTCTATGATAAAGAATCATTGCGAACGTAAAAACCCATCATGCCGCTCTTGATTCTCATTATACACACTGGTGAAGCTGATATTCAACAACAATGTTGGCAAAAAGGGAAAGTTCGACGTACAATTTGTAAAGAAAATGGTAACTCTTCTTCTCTATTAACAACCGTTTCTCTTTGTGTGTGTCGATATAGTTCCTCGGGTTTCGTATTTACTTCGTGTGTGTTCACCATTTGTGTTTTGTGGGATTTATCAAGTATTTCTGCGTTGCTGATTCTCTTAATCAGTCTTGTATCACGAGGTTTGTGTTTCATACAGTCTGAGCTAATATGAATCATTTTCTGCAATCTTTGTAAGCTTTTTATTTTTTCTAATTTATGGTCAATCTTTGAATGTGAATGTTGAGAGAGTTTTTGTGTTAGTACCAACTACTTGTTTGTTGGGACTGGGTACGAGTAACGACCGTGAGGGTTTTGAGGAATACTCTCAAACATTAAACTCTCGTGAAGATTGGATTATGTTGGTCTTTACTTGGACAACCCTTTATTTCAGGTCCATTAGCCATAAAATGGAACCACACCGGAAGAATTATGTCAGGAATATTAGTTGTTACCAAACCCAAATTTAATTAGAATACATTTTTCAAGCTATGTAGTAGTAGTAACTAATTTTTTGATTACGTGTAAAATTCAAAGATCAATTTTCAGAAACTGGA
CDS Sequence
Protein Sequence