Information report for AT5G38850
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- A genome-wide survey of R gene polymorphisms in Arabidopsis. DOI: 10.1105/tpc.106.042614 ; PMID: 16798885
- A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. DOI: 10.1101/gad.1476406 ; PMID: 17182867
- Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in and tasiRNA-directed targeting. DOI: 10.1105/tpc.107.050062 ; PMID: 17400893
- Global expression analysis of nucleotide binding site-leucine rich repeat-encoding and related genes in Arabidopsis. DOI: 10.1186/1471-2229-7-56 ; PMID: 17956627
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Function of miR825 and miR825* as Negative Regulators in Bacillus cereus AR156-elicited Systemic Resistance to Botrytis cinerea in Arabidopsis thaliana. DOI: 10.3390/ijms20205032 ; PMID: 31614458
- miR825-5p targets the TIR-NBS-LRR gene MIST1 and down-regulates basal immunity against Pseudomonas syringae in Arabidopsis. DOI: 10.1093/jxb/erab354 ; PMID: 34329403
Gene Resources
- UniProt: Q9FMB7
- EMBL: AB009048, CP002688
- AlphaFoldDB: Q9FMB7
- EnsemblPlants: AT5G38850.1
- Gramene: AT5G38850.1
- KEGG: ath:AT5G38850
- Orthologous matrix: CHEVGNE
- ExpressionAtlas: AT5G38850
- InterPro: IPR000157, IPR001611, IPR002182
- PANTHER: PTHR11017, PTHR11017:SF225
- SUPFAM: SSF46785, SSF52058, SSF52200
- PROSITE: PS50104, PS51450
- Gene3D: 1.10.8.430, 3.40.50.10140, 3.40.50.300
- SWISS-MODEL: Q9FMB7
Sequences
cDNA Sequence
- >AT5G38850.1
ATCCAAACGCAATCTCTCACGACCGTCTCCTATGGCTTCTGCTCGAACTTGGAGATACAACGTCTTCCCGAGCTTCCATGGAGGAGATATTCGTAAGACTTTTCTCTCTCATTTACGTAAGCAGTTCAACTCAAATGGGATTACAATGTTTGATGATCAAGGAATCGAGAGGAGCCAAACCATAGCCCCTGCTCTCATACAAGCGATTAGAGAATCTAGGATATCGATTGTGGTTCTTTCAAAGAACTATGCTTCTTCGAGTTGGTGCTTGAATGAATTGGTGGAGATTTTGAAATGCAAAGACGTAGTGATGCCGATCTTCTATGAAGTAGATCCATCCGATGTACGGAAACAGACCGGAGATTTTGGGAAGGCCTTCAAAAATAGTTGTAAAAGTAAAACTAAGGAGGAGAGGCAGAGATGGATCCAAGCTTTAATTTTTGTTGGCAACATAGCTGGAGAACACTCGCTGAAATGGGAAAATGAAGCGGATATGATTGAAAAGATAGCCAAAGATGTTTCAGATAAACTGAATGCTACACCTTCTAAAGATTTTGATGCATTTGTGGGACTTGAGTTTCACATTAGGGAATTAAGTTCTCTGCTATACCTAGACTATGAGCAAGTGAGGATAGTAGGAATCTGTGGCCCTGCAGGAATCGGTAAGACTACCATTGCTCGTGCTTTACAAAGCCTACTCTCTAGCAATTTTCAGCGAAGTTGTTTTATGGAGAATGTTAGGGGAAGTCTTAATATTGGGCTTGACGAGTATGGTCTGAAGTTAGATTTACAAGAACGACTTCTTTCAAAGATTATGAACCAAAAGGGTATGAGGATAGAGCATTTAGGCACAATAAGAGATAGGTTACATGACCAAAAAGTGCTTATCATTCTAGATGATGTTAATGATCTCGATTTGTATGCTTTGGCTGATCAGACAACGTGGTTTGGTCCTGGAAGTAGGATTATCGTGACAACAGAAGACAACGAGCTTTTGCAGAAACATGATATTAACAATGTCTACCATGTGGATTTTCCATCTAGAAAAGAAGCTCTTGAGATCTTTTGCAGATGTGCTTTTAGACAAAGCTCTGCACCTGATACGATTCTAAAGCTTGCAGAACGAGTAACAGAGCTTTGTGGTAATCTTCCATTGGGTCTCTGTGTCATAGGTTCATCTTTACACGGGAAAACTGAGGATGAGTGGGAAATTTTAATTCGCAGACTAGAAATTAGTCTTGATCGAGATAACGAGGCACAACTTAGAGTTGGGTATGATAGCTTACATGAGAACGAGCAAGCTTTATTTCTCAGCATTGCAGTCTTCTTCAACTATAAAGACCGTCAGCTTGTGATGGCCATGCTCCTTGACAGTAACCTAGATGTCGAGTATGGGTTAAGAACCCTCGCCAATAAATCTCTAATACATATATCTAGGAATGAGAAAATAGTGATGCATAACTTACTACAACATGTGGGTAGACAAGCCATTCAAAGACAAGAACCTTGGAAACGCCACATCTTAATAGATGCTGACGAGATATGCAATGTCCTTGAAAATGATACAGATGCTAGAATTGTGTCAGGGATATCATTTGATATATCCAGAATCGGCGAAGTTTTTTTAAGCGAGAGAGCTTTTAAAAGATTGTGTAATCTCCAATTCCTCAGGGTGTTTAAGACTGGATATGATGAAAAAAACAGAGTGCGCATACCGGAGAACATGGAGTTTCCACCTCGTCTAAGGTTACTACAGTGGGAAGCATATCCGAGGAGAAGTCTTTCTCTTAAACTTAACCTGGAATATCTTGTCGAACTTGATATGGAAGGTAGCCTGCTCGAGAAGCTATGGGATGGAACTCAGCCCCTTGCAAATCTCAAGAAGATGTCTTTGTCAAGTTCATGGTATTTAAAGAAACTTCCGGATCTGTCAAATGCTACAAATCTCGAAGAATTGGATCTGAGAGCTTGCCAGAATTTAGTAGAGCTTCCTTCCTCCTTTTCTTATCTGCATAAGCTAAAGTATTTGAATATGATGGGATGCAGAAGGCTAAAAGAAGTTCCACCTCATATCAACTTGAAGTCTCTTGAATTGGTCAACATGTATGGATGCTCAAGATTAAAAAGCTTTCCAGATATTTCTACAAACATCAGTTCACTCGACATATCATACACTGATGTGGAAGAACTACCTGAATCAATGACGATGTGGTCTCGCCTACGTACTCTCGAAATATACAAAAGTAGAAACCTCAAGATAGTAACACATGTGCCCCTAAACCTAACATATCTAGACCTCAGCGAGACTAGAATTGAGAAGATTCCAGATGACATCAAAAATGTTCATGGGCTGCAAATTTTATTTCTAGGTGGCTGCAGAAAACTCGCATCATTGCCAGAGCTTCCTGGTTCGCTCTTGTACTTATCAGCAAACGAGTGTGAATCACTTGAGAGCGTATCTTGCCCTTTTAATACTTCATACATGGAACTCAGCTTCACCAACTGCTTCAAACTAAACCAAGAAGCACGCAGAGGAATTATTCAACAATCATTTTCTCATGGGTGGGCATCCTTACCTGGAAGAGAGTTGCCCACTGACTTATACCACCGATCTACCGGACATTCCATCACCGTTCGTCTCGAGGGCAAGACTCCTTTTTCTGCATTCTTTGGATTTAAGGTTTTCCTCGTGATTTCCCCTAACCATGATGCTGAAGAAACTAGCAATTCTCCCTTATTTTGTCCTCGCATTGGCAAAATCGGTTGCTCCGATGACGAAACACCTATTTATATTATCCCCAAACCTCGAGCAGAACATCTAGTTATGTTTCACTCTGACTTGCATAACAAGGAAAAATGTCATGAAGTAGGCAACGAGATACTGTTTGAATTCAGCAACATATCCGACACCTATGAGATTATTGAGTGTGGTGTCAGATTCTATACAGATGAACAGGTGAAATCAGTGAAAGGAGAAATGAATATGAAATAGACCAAGTTTGTGAAGATGAAAACGATTGGAGCTATGAGTTTGGACCCGTGGAAGCATTGGAATGCTCTAAAAATAATGGACATAATGATAGCCTAATCTGTACTTCGAACGAAGACAAGATCGAAGCCAACAAATACACAGATTGTTGGAGTTGGCTCATCATCTGTTTTGATGTCTCCCATATTGTGAGAAGCATCGGAAGTTTAGTTTGGGGAGGAAGATGAGAGAAGCAAGAAGGAGAATATCAAAGTGGAGAAGTCGAACGAATTTGCAAGTGAGGAAAGAATATCTGTTTATACTTTACAATGACTTGTTTGGCTGCTTCACTGAGTTGGATATGATGAGTAGTAGCATCATACTGTTTGAATTCGGATGCAGCAAATATTACTGAAATGCAGTGTACGGATCGTGAAAACTGACAAAATTGATAGTAGCAACAACAGTGAATTAAT
CDS Sequence
Protein Sequence