Information report for AT5G38820
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Sequence analysis of a 282-kilobase region surrounding the citrus Tristeza virus resistance gene (Ctv) locus in Poncirus trifoliata L. Raf. DOI: 10.1104/pp.011262 ; PMID: 12586873
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response. DOI: 10.1105/tpc.104.024315 ; PMID: 15539473
- The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana. DOI: 10.1534/genetics.106.061374 ; PMID: 17028338
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Ethylene and nitric oxide involvement in the up-regulation of key genes related to iron acquisition and homeostasis in Arabidopsis. DOI: 10.1093/jxb/erq203 ; PMID: 20627899
- Effect of ACGT motif in spatiotemporal regulation of AtAVT6D, which improves tolerance to osmotic stress and nitrogen-starvation. DOI: 10.1007/s11103-022-01256-x ; PMID: 35377091
Gene Resources
- UniProt: A0A654G763
- EMBL: CACRSJ010000110, LR881470
- AlphaFoldDB: A0A654G763
- EnsemblPlants: AT5G38820.2
- Gramene: AT5G38820.2
- ExpressionAtlas: AT5G38820
- InterPro: IPR013057
- PANTHER: PTHR22950, PTHR22950:SF518
Sequences
cDNA Sequence
- >AT5G38820.2
CCCATTCTCTGCTTCTTTCTTCAACTAAAATTCTTTTTCCGCAGAGATCGATTTCTCAAATCTCTGTATCATCTTCTCCATTGTTTAGAAAAACTAGGGTTCTTATAGATCCTCTTCTCTCTCGTCCCTCAAATCTCTCGTCGACATCATCTTACGAAGATCCACAACAACATCTGAAGAAAATCGCAAGAAAACATCCAATTTCACAAACTCTAGGTTTCCGATTTCTTCTTCCTTTTCTCTAATCTTCAATTTGATCAATCCGTTGCAAAATCGAACTTCAACATCTGTATCTAATCCAAGATTCTCAATGATTTCAGGATCAATGGAGAATCTAGATGAAATCCGTACCGATATTGTCGAATCTACTGCTCCGTTGTTGCAAGAATCATCATCAGAGAGCAACGGAGGAGGAGAATTCAACGGAGCTTCGTTTAGTGGTGCGGTTTTCAATCTCGCTACAACGATCATCGGAGCTGGTATCATGGCATTGCCTGCGACGATGAAGATCCTCGGTCTTATTCCCGGAATCACGATCATCGTTCTCATGGCTTTCTTAACCGATGCTTCGATTGAGTTCTTGCTTAGGTTTAGTAACATTGGGAATCAAAGATCTTACGGTGGTGTTATGGATGATTCTTTTGGTAAATGTGGAAGGATTATGTTGCAAGTTTCGATTCTCGTTAGCAACATTGGTGTTTTGATCGTTTATATGATCATCATTGGTGATGTTTTGGCTGGTAAGAATGAATATGGAATCCATCATGCTGGTATGCTTGAAGGATGGTTTGGGATTAGTTGGTGGAACAGAAGAACTTTTGTTCTTCTTGTTACTACTCTCACTGTCTTTGCTCCATTGACTTGCTTCAAACGAATTGATTCTTTGAGATTCACATCTGCTATATCAGTTGCTTTAGCGGTTGTTTTTCTTGTCATCACTGCTGGAATTACTATCATTAAGCTGTTTACTGATGGTTTGATGATGCCGAGACTTCTACCTAATGTCACTGACTTGTCGTCGTTTTGGAAACTCTTCACGGTTGTTCCTGTGCTTGTCAATGCATACATTTGCCATTACAATGTTCATAGTATACAGAACGAGCTTGAAGACCCTTCTCGGATAAAACCTGTTGTTCGATCAGCACTTGCGATGTGTTCTTCTGTTTACGTTATGACGAGTTTATTCGGATACCTCTTATTCGGTGATGGTACTCTTGATGATGTTCTTGCAAACTTTGACACGGATCTTGGAATCCCTTTTGGTTCGGTTCTTAATGATGCAGTGAGATTTAGCTACGCAGCTCATCTCATGCTTGTGTTCCCTGTTGTCTTCTATCCTCTGCGGATTAACATCGACGGTCTCATCTTTCCTACGGCTCCACCACTTACTTCCTCTGAGTCTGATCTGAGGTTTGGCTCTATTACTGCTGGTCTCATTGCTGTAATCTTCTTGGGAGCAAACTTCATACCAAGCATTTGGGATGCTTTCCAATTTACTGGAGCAACTGCTGCTGTCTGCATCGGTTTCATATTCCCTGCTGCTGTTATCTTAAAGGATCGTCATAACCAAGCAACCAAGCGAGACAAGACTATAGCCATTTGCATGATCGTCCTTGCGGTTTTCTCCAATGCAATCGCCATTTACAGTGACGCCTACGCCTTATTCAAGAAGCACACATACGTATATCCAATATGAAAACCAGTGATGATTCTGTTTCTTCTCTCACTCACTCTATGTGAAACGAAATATGAGAAGAGTTATTGGTGTAAGATGTCTTTAGATGATTTTGAACCACATGATAATAGTTGTAAACTCTCTGTATATAAAGAGAATGATCAGTTTTTCTACGTTTCTTTTTTAGTTGTAAAAAGGGTCTATAGAAGTGAAAGATGTTCCTTTACATCATCTTCATCATTAATGCTACACACATTCAATATGAGTTAATTGAGTGGGTTTTGGTC - >AT5G38820.3
CCCATTCTCTGCTTCTTTCTTCAACTAAAATTCTTTTTCCGCAGAGATCGATTTCTCAAATCTCTGTATCATCTTCTCCATTGTTTAGAAAAACTAGGGTTCTTATAGATCCTCTTCTCTCTCGTCCCTCAAATCTCTCGTCGACATCATCTTACGAAGATCCACAACAACATCTGAAGAAAATCGCAAGAAAACATCCAATTTCACAAACTCTAGGTTTCCGATTTCTTCTTCCTTTTCTCTAATCTTCAATTTGATCAATCCGTTGCAAAATCGAACTTCAACATCTGTATCTAATCCAAGATTCTCAATGATTTCAGGATCAATGGAGAATCTAGATGAAATCCGTACCGATATTGTCGAATCTACTGCTCCGTTGTTGCAAGAATCATCATCAGAGAGCAACGGAGGAGGAGAATTCAACGGAGCTTCGTTTAGTGGTGCGGTTTTCAATCTCGCTACAACGATCATCGGAGCTGGTATCATGGCATTGCCTGCGACGATGAAGATCCTCGGTCTTATTCCCGGAATCACGATCATCGTTCTCATGGCTTTCTTAACCGATGCTTCGATTGAGTTCTTGCTTAGGTTTAGTAACATTGGGAATCAAAGATCTTACGGTGGTGTTATGGATGATTCTTTTGGTAAATGTGGAAGGATTATGTTGCAAGTTTCGATTCTCGTTAGCAACATTGGTGTTTTGATCGTTTATATGATCATCATTGGTGATGTTTTGGCTGGTAAGAATGAATATGGAATCCATCATGCTGGTATGCTTGAAGGATGGTTTGGGATTAGTTGGTGGAACAGAAGAACTTTTGTTCTTCTTGTTACTACTCTCACTGTCTTTGCTCCATTGACTTGCTTCAAACGAATTGATTCTTTGAGATTCACATCTGCTATATCAGTTGCTTTAGCGGTTGTTTTTCTTGTCATCACTGCTGGAATTACTATCATTAAGCTGTTTACTGATGGTTTGATGATGCCGAGACTTCTACCTAATGTCACTGACTTGTCGTCGTTTTGGAAACTCTTCACGGTTGTTCCTGTGCTTGTCAATGCATACATTTGCCATTACAATGTTCATAGTATACAGAACGAGCTTGAAGACCCTTCTCGGATAAAACCTGTTGTTCGATCAGCACTTGCGATGTGTTCTTCTGTTTACGTTATGACGAGTTTATTCGGATACCTCTTATTCGGTGATGGTACTCTTGATGATGTTCTTGCAAACTTTGACACGGATCTTGGAATCCCTTTTGGTTCGGTTCTTAATGATGCAGTGAGATTTAGCTACGCAGCTCATCTCATGCTTGTGTTCCCTGTTGTCTTCTATCCTCTGCGGATTAACATCGACGGTCTCATCTTTCCTACGGCTCCACCACTTACTTCCTCTGAGTCTGATCTGAGGTTTGGCTCTATTACTGCTGGTCTCATTGCTGTAATCTTCTTGGGAGCAAACTTCATACCAAGCATTTGGGATGCTTTCCAATTTACTGGAGCAACTGCTGCTGTCTGCATCGGTTTCATATTCCCTGCTGCTGTTATCTTAAAGGATCGTCATAACCAAGCAACCAAGCGAGACAAGACTATAGCCATTTGCATGATCGTCCTTGCGGTTTTCTCCAATGCAATCGCCATTTACAGTGACGCCTACGCCTTATTCAAGAAGCACACATACGTATATCCAATATGAAAACCAGTGATGATTCTGTTTCTTCTCTCACTCACTCTATGTGAAACGAAATATGAGAAGAGTTATTGGTGTAAGATGTCTTTAGATGATTTTGAACCACATGATAATAGTTGTAAACTCTCTGTATATAAAGAGAATGATCAGTTTTTCTACGTTTCTTTTTTAGTTGTAAAAAGGGTCTATAGAAGTGAAAGATGTTCCTTTACATCATCTTCATCATTAATGCTACACACATTCAATATGAGTTAATTGAGTGGGTTTTGGTC - >AT5G38820.1
CCCATTCTCTGCTTCTTTCTTCAACTAAAATTCTTTTTCCGCAGAGATCGATTTCTCAAATCTCTGTATCATCTTCTCCATTGTTTAGAAAAACTAGGGTTCTTATAGATCCTCTTCTCTCTCGTCCCTCAAATCTCTCGTCGACATCATCTTACGAAGATCCACAACAACATCTGAAGAAAATCGCAAGAAAACATCCAATTTCACAAACTCTAGGTTTCCGATTTCTTCTTCCTTTTCTCTAATCTTCAATTTGATCAATCCGTTGCAAAATCGAACTTCAACATCTGTATCTAATCCAAGATTCTCAATGATTTCAGGATCAATGGAGAATCTAGATGAAATCCGTACCGATATTGTCGAATCTACTGCTCCGTTGTTGCAAGAATCATCATCAGAGAGCAACGGAGGAGGAGAATTCAACGGAGCTTCGTTTAGTGGTGCGGTTTTCAATCTCGCTACAACGATCATCGGAGCTGGTATCATGGCATTGCCTGCGACGATGAAGATCCTCGGTCTTATTCCCGGAATCACGATCATCGTTCTCATGGCTTTCTTAACCGATGCTTCGATTGAGTTCTTGCTTAGGTTTAGTAACATTGGGAATCAAAGATCTTACGGTGGTGTTATGGATGATTCTTTTGGTAAATGTGGAAGGATTATGTTGCAAGTTTCGATTCTCGTTAGCAACATTGGTGTTTTGATCGTTTATATGATCATCATTGGTGATGTTTTGGCTGGTAAGAATGAATATGGAATCCATCATGCTGGTATGCTTGAAGGATGGTTTGGGATTAGTTGGTGGAACAGAAGAACTTTTGTTCTTCTTGTTACTACTCTCACTGTCTTTGCTCCATTGACTTGCTTCAAACGAATTGATTCTTTGAGATTCACATCTGCTATATCAGTTGCTTTAGCGGTTGTTTTTCTTGTCATCACTGCTGGAATTACTATCATTAAGCTGTTTACTGATGGTTTGATGATGCCGAGACTTCTACCTAATGTCACTGACTTGTCGTCGTTTTGGAAACTCTTCACGGTTGTTCCTGTGCTTGTCAATGCATACATTTGCCATTACAATGTTCATAGTATACAGAACGAGCTTGAAGACCCTTCTCGGATAAAACCTGTTGTTCGATCAGCACTTGCGATGTGTTCTTCTGTTTACGTTATGACGAGTTTATTCGGATACCTCTTATTCGGTGATGGTACTCTTGATGATGTTCTTGCAAACTTTGACACGGATCTTGGAATCCCTTTTGGTTCGGTTCTTAATGATGCAGTGAGATTTAGCTACGCAGCTCATCTCATGCTTGTGTTCCCTGTTGTCTTCTATCCTCTGCGGATTAACATCGACGGTCTCATCTTTCCTACGGCTCCACCACTTACTTCCTCTGAGTCTGATCTGAGGTTTGGCTCTATTACTGCTGGTCTCATTGCTGTAATCTTCTTGGGAGCAAACTTCATACCAAGCATTTGGGATGCTTTCCAATTTACTGGAGCAACTGCTGCTGTCTGCATCGGTTTCATATTCCCTGCTGCTGTTATCTTAAAGGATCGTCATAACCAAGCAACCAAGCGAGACAAGACTATAGCCATTTGCATGATCGTCCTTGCGGTTTTCTCCAATGCAATCGCCATTTACAGTGACGCCTACGCCTTATTCAAGAAGCACACATACGTATATCCAATATGAAAACCAGTGATGATTCTGTTTCTTCTCTCACTCACTCTATGTGAAACGAAATATGAGAAGAGTTATTGGTGTAAGATGTCTTTAGATGATTTTGAACCACATGATAATAGTTGTAAACTCTCTGTATATAAAGAGAATGATCAGTTTTTCTACGTTTCTTTTTTAGTTGTAAAAAGGGTCTATAGAAGTGAAAGATGTTCCTTTACATCATCTTCATCATTAATGCTACACACATTCAATATGAGTTAATTGAGTGGGTTTTGGTC
CDS Sequence
Protein Sequence