Information report for AT5G38560
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- The proline-rich, extensin-like receptor kinase-1 (PERK1) gene is rapidly induced by wounding. DOI: 10.1023/a:1019951120788 ; PMID: 12374299
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- A chloroplast-localized vesicular transport system: a bio-informatics approach. DOI: 10.1186/1471-2164-5-40 ; PMID: 15236667
- A comprehensive expression analysis of the Arabidopsis proline-rich extensin-like receptor kinase gene family using bioinformatic and experimental approaches. DOI: 10.1093/pcp/pch206 ; PMID: 15653807
- Altered Expression of PERK Receptor Kinases in Arabidopsis Leads to Changes in Growth and Floral Organ Formation. DOI: 10.4161/psb.1.5.3324 ; PMID: 19516986
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- PERK-KIPK-KCBP signalling negatively regulates root growth in Arabidopsis thaliana. DOI: 10.1093/jxb/eru390 ; PMID: 25262228
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data. DOI: 10.1104/pp.110.168195 ; PMID: 21075962
Gene Resources
- UniProt: A0A654G6I6
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G6I6
- EnsemblPlants: AT5G38560.1
- Gramene: AT5G38560.1
- KEGG: ath:AT5G38560
- Orthologous matrix: KACMSDI
- ExpressionAtlas: AT5G38560
- InterPro: IPR000719, IPR003882, IPR008271
- PANTHER: PTHR47982, PTHR47982:SF32
- SUPFAM: SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20
- SWISS-MODEL: A0A654G6I6
- Conserved Domain Database: cd14066
Sequences
cDNA Sequence
- >AT5G38560.1
AAAACGAAACTCAAGTCAATGAATAAAAAGACGAAACAATGCTATGATAAGAAAAGAAACAACACTCGAAAAAGTTCTTCTTTTTCTTCCGCACATGTCTGACTCTCTCATAAGCGTAAATCGCTCTGTCAAATATCTCTGACCAGAGAGACAGAGTTGCCTCCACGTTTCTTCAGACAAGACTCACGCTCTTCCCTTTCACCACATTCCCTTCTCCATTTCTCAATCTCACTTACCTTCTCGATTCTTGCTCCAATTTCGAATCTTCCGAGTGAAAAAAGCTTCAAAGTTTGGAACTTTCTAGTGTTTATTAATCTGGGTCTGCTCTGAGTTTCGTGTGTAGCTGCATATGAGCTTAAAGCTCGAGTTTTTCCATCTGGGTTTGGAATTCTAGGGCTAGTGATTGGAGATTTTGGGAATTTAGGTTGATTTTAGTAGGTTTGACTTCAGGTTGCGTAATTTAGGTTGATTTTGATCCGATTTGTGGAATTAGGGTTTGTTTGTTCACAAAGCTTCAATTTTTGGAGTTTAAATGGATCGATAACGACTGTGTTAGAAGAAAGTTTGCTGCTTCAGATTCGTATTCGATATAGAAATGAGTTTGGTTCCTCCTTTACCGATTTTATCACCACCGTCGTCAAATTCTTCAACAACTGCACCTCCTCCGTTACAGACTCAGCCCACCACTCCATCTGCTCCACCTCCGGTTACACCACCTCCTTCTCCGCCGCAATCTCCGCCGCCGGTTGTATCATCATCACCACCACCACCGGTTGTTTCGTCACCTCCACCGTCTTCTTCTCCACCACCGTCACCTCCTGTCATCACTTCACCTCCTCCCACCGTTGCTTCTTCCCCTCCACCTCCTGTGGTGATTGCTTCCCCTCCTCCCTCAACTCCGGCGACAACACCACCAGCTCCTCCGCAAACTGTCTCACCTCCACCGCCTCCTGATGCTTCTCCATCACCTCCCGCACCAACAACAACAAATCCTCCTCCTAAACCTTCTCCTTCACCGCCGGGAGAAACACCTTCACCACCGGGAGAAACACCTTCACCGCCTAAACCTTCTCCGTCAACTCCAACTCCAACAACAACCACATCTCCTCCTCCTCCTCCAGCTACCTCTGCTTCTCCTCCGTCTTCAAATCCTACTGATCCTTCTACGTTAGCTCCTCCTCCAACTCCATTACCTGTTGTTCCCAGAGAGAAACCAATTGCTAAACCAACTGGACCAGCTTCAAACAATGGAAACAACACTTTGCCGTCTAGTTCACCAGGTAAAAGCGAAGTTGGTACTGGAGGTATTGTAGCTATCGGAGTGATTGTGGGATTGGTTTTTCTTAGCCTTTTTGTGATGGGTGTGTGGTTCACTCGGAAACGAAAGCGAAAGGACCCTGGAACCTTTGTTGGATACACAATGCCTCCTTCCGCTTATTCATCTCCTCAAGGCTCAGATGTAGTGCTCTTCAACTCGCGTTCTTCAGCTCCTCCTAAAATGAGAAGCCATTCTGGTAGCGATTACATGTATGCGTCATCTGATTCAGGCATGGTTAGCAACCAAAGATCATGGTTTTCATATGATGAGTTATCTCAAGTTACCAGTGGGTTCTCCGAGAAGAATCTTCTCGGTGAAGGAGGGTTTGGCTGTGTATACAAAGGCGTTCTTTCTGACGGAAGGGAAGTGGCAGTTAAACAGTTAAAGATTGGTGGAAGCCAAGGGGAGAGAGAGTTCAAAGCAGAAGTTGAAATCATTTCTCGGGTTCATCACCGCCATTTGGTTACACTAGTTGGTTATTGCATCTCAGAGCAACATAGGTTGCTTGTATATGATTATGTACCTAACAACACTCTCCATTATCATCTCCATGCTCCAGGAAGACCAGTTATGACTTGGGAAACTCGGGTAAGGGTCGCTGCTGGTGCAGCTCGTGGAATCGCCTACTTACATGAAGACTGTCATCCCCGCATTATTCACCGTGACATAAAATCTTCCAACATACTTCTTGATAACAGCTTTGAAGCCTTGGTTGCGGATTTTGGACTTGCAAAAATTGCACAAGAACTGGATTTAAACACACACGTCTCAACGCGCGTAATGGGAACCTTTGGGTACATGGCTCCTGAATATGCAACAAGTGGAAAGCTGTCTGAAAAAGCAGATGTTTATTCGTATGGGGTAATACTGTTGGAGCTTATAACTGGCCGTAAACCCGTAGATACGTCTCAACCACTTGGTGATGAGAGCCTTGTTGAATGGGCAAGACCCTTGCTGGGTCAAGCAATCGAGAACGAAGAATTCGACGAGCTAGTAGATCCGAGGCTAGGGAAAAACTTCATCCCAGGAGAGATGTTCAGAATGGTAGAAGCTGCGGCTGCATGTGTCCGCCACTCAGCTGCAAAAAGACCAAAGATGAGTCAAGTGGTGAGAGCTTTGGACACACTTGAAGAAGCAACGGACATAACCAACGGAATGAGACCAGGACAGAGCCAAGTGTTTGACTCGAGACAACAATCTGCTCAGATAAGGATGTTTCAAAGAATGGCTTTTGGGAGTCAAGATTATAGTTCTGACTTCTTTGATCGCTCACAGTCACATAGTAGCTGGGGCAGTCGTGACCAGTCCAGATTTGTACCTTAGTAGTTTTTATTGCCTTTGCTTCTTTCTTCTTTCCCTTTAAACATGTCCTCGATCTTGTATATTCTTTTGCATGATATAATGTATTTTTGAAATATACATACATACACACATAAAATTTGGTAGTCTTTTGAAGAAAAAGAATAACAGATGTATTTGATAGATAGTGGTCCTTGCTTTATCTAATGATTGCTGAACCGGGTTAACAAATTGAGTCTTGGTTTCTCTTGTTTACTTGCTTAATCGTTTCTTTGTACTGAGTTCTTAATCGGATTTGTGAGCTGTGAGTTGC
CDS Sequence
Protein Sequence