Information report for AT5G38530
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Post-genomics approaches for the elucidation of plant adaptive mechanisms to sulphur deficiency. DOI: 10.1093/jxb/erh184 ; PMID: 15208337
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2005.02587.x ; PMID: 16297073
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Principal transcriptional programs regulating plant amino acid metabolism in response to abiotic stresses. DOI: 10.1104/pp.108.115733 ; PMID: 18375600
- Transcription factors relevant to auxin signalling coordinate broad-spectrum metabolic shifts including sulphur metabolism. DOI: 10.1093/jxb/ern144 ; PMID: 18596113
- Comparative Coexpression Analysis of Indole Synthase and Tryptophan Synthase A Reveals the Independent Production of Auxin via the Cytosolic Free Indole. DOI: 10.3390/plants12081687 ; PMID: 37111910
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q9FFW8
- EMBL: AB005231, AY081349, BT000255
- AlphaFoldDB: Q9FFW8
- EnsemblPlants: AT5G38530.1
- Gramene: AT5G38530.1
- KEGG: ath:AT5G38530
- Orthologous matrix: MLHQTII
- ExpressionAtlas: AT5G38530
- InterPro: IPR001926, IPR006316, IPR006654
- PANTHER: PTHR48077, PTHR48077:SF6
- SUPFAM: SSF53686
- Gene3D: 3.40.50.1100
- SWISS-MODEL: Q9FFW8
- Conserved Domain Database: cd06446
Sequences
cDNA Sequence
- >AT5G38530.1
CGGGAAGTCTTCGTTGGAGTCTATTATTTAAATGCTTCACCGATCTCTCATTACTCTCTAGTCAATATCCCAAAATCCCTAATTCATATCTTTGAAACTGATAAAGATAACAAAGAAATGGCCTCTCAATTGCTTTTACCTCCAAACCAATTCACTAAATCAGTCTCACCTCAAGTTTTCATTACTGGTGATTGTCAAGGATTTAGTGACTTAACTCTGAAAAGAAAATCAAACCAAGCTACAAGAGTTTCAAATGGATCTAGCTTAAGAGTAAAAGCAGCTTTGAGATCTACTCACAACAAATCAGTGGTTGAGATTCCAAAACAATGGTATAATCTTGTTGCTGATCTTTCAGTCAAGCCTCCTCCACCGTTGCATCCAAAGACTTTCGAACCGATAAAACCCGAAGATTTGGCTCATCTTTTCCCCAATGAGTTGATTAAACAAGAAGCTACACAAGAGAGGTTTATTGATATCCCTGAGGAAGTTCTTGAAATCTATAAGCTTTGGCGTCCAACTCCTCTAATCAGAGCAAAGAGATTAGAGAAGCTTCTTCAAACACCGGCAAGGATTTACTTCAAGTATGAAGGTGGTAGCCCAGCTGGTTCACACAAACCAAACACAGCGGTTCCACAAGCTTATTACAATGCGAAAGAAGGCGTCAAGAACGTTGTGACGGAAACCGGTGCTGGTCAATGGGGAAGTTCTTTAGCCTTTGCTTCTAGTCTATTTGGTCTCGACTGCGAAGTATGGCAAGTAGCCAACTCTTACCATACAAAGCCATATCGCCGGTTAATGATGCAAACTTGGGGTGCAAAGGTTCATCCGTCGCCATCGGATCTCACTGAGGCGGGTAGAAGAATCCTCGAATCCGATCCATCAAGTCCGGGAAGTTTAGGCATTGCGATATCAGAAGCGGTTGAAGTTGCAGCGAGAAACGAGGATACAAAATACTGCCTAGGGAGTGTATTGAACCATGTGTTGTTACACCAAACAATTATTGGAGAAGAATGCATTCAACAAATGGAGAATTTTGGTGAAACACCTGACCTGATCATAGGGTGTACTGGTGGAGGATCAAATTTTGCTGGTTTGAGTTTTCCTTTTATCCGGGAGAAACTCAAAGGCAAAATCAACCCTGTTATAAGAGCGGTTGAGCCATCTGCTTGTCCTTCCTTGACCAAAGGGGTTTATGCTTATGATTTTGGCGATACGGCTGGATTGACTCCTTTGATGAAGATGCATACTTTGGGACATGACTTCATTCCTGATCCTATCCATGCCGGTGGATTAAGGTACCATGGGATGGCACCATTGATCTCACATGTTTATGAACAAGGATTCATGGAAGCAATTTCAATTCCTCAAATTGAGTGTTTCCAAGGTGCTATTCAGTTTGCAAGAACAGAAGGGATCATACCCGCACCAGAACCGACCCACGCCATTGCTGCAACCATAAGAGAGGCTCTCCGATGTAAAGAGACGGGAGAAGCAAAAGTGATACTAATGGCGATGTGTGGACATGGCCATTTCGACCTTACTTCTTACGACAAGTATTTAAAAGGCGAGTTGGTGGATTTATCATTCAGCGAAGAGAAGATACGAGAGTCTTTGTCCAAGGTTCCTCATGTTGTTTAAGCTCGAATGGCCCCATAACCACGGGAAACCAATGTCCCATGTTCCAAACTAGACGTGAGACAGAAGTTAGGTTTAATCTTGGCTTTTGAAATGAAGAGTGAGAGAGAGGACAACTTCAAAACATGAACAAAATTATCTCTTGAAATAAGAATAAAAAAGGCATTTACAGAAACACCACATTTTGGGGTTAGGTCTCTATTTTTCACTCTATATATGGAGAAATCTTTGCAAGATATGAAGCTCGACGATAAGTCGATGATGAACCTTTAATTCTTCCAAAAC
CDS Sequence
Protein Sequence