Information report for AT5G38470
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Automated identification of putative methyltransferases from genomic open reading frames. DOI: 10.1074/mcp.M300037-MCP200 ; PMID: 12872006
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- Resources for targeted insertional and deletional mutagenesis in Arabidopsis. DOI: 10.1023/B:PLAN.0000009271.08420.d9 ; PMID: 14756312
- CENTRIN2 modulates homologous recombination and nucleotide excision repair in Arabidopsis. DOI: 10.1105/tpc.021378 ; PMID: 15155891
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The RAD23 family provides an essential connection between the 26S proteasome and ubiquitylated proteins in Arabidopsis. DOI: 10.1105/tpc.109.072660 ; PMID: 20086187
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- RAD7 homologues contribute to Arabidopsis UV tolerance. DOI: 10.1016/j.plantsci.2018.09.017 ; PMID: 30466592
- Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. DOI: 10.1046/j.1365-313x.2003.01864.x ; PMID: 14535880
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A8MR76
- EMBL: CP002688
- AlphaFoldDB: A8MR76
- EnsemblPlants: AT5G38470.2
- Gramene: AT5G38470.2
- ExpressionAtlas: AT5G38470
- InterPro: IPR000626, IPR004806, IPR006636
- PANTHER: PTHR10621, PTHR10621:SF49
- SUPFAM: SSF101238, SSF46934, SSF54236
- PROSITE: PS50030, PS50053
- Gene3D: 1.10.10.540, 1.10.8.10, 3.10.20.90
- OrthoDB: A8MR76
- SWISS-MODEL: A8MR76
- Conserved Domain Database: cd01805, cd14379
Sequences
cDNA Sequence
- >AT5G38470.2
CTCTCTCTATACTTTGCTTCTCTCTCTAAACTTCTCTCTTTCTTTTTTTCTCAAAGCTTTTTTCCTTCTCCCTAAACGATGAAGATTTTCGTGAAGACTCTCAGTGGTTCGAACTTCGAGATCGAAGTAAAACCTGCAGATAAGGTTTCTGATGTTAAAACGGCTATAGAAACTGTTAAAGGTGCAGAATACCCTGCTGCTAAGCAGATGCTGATCCACCAAGGAAAGGTTCTAAAGGATGAGACCACATTGGAAGAGAACAATGTTGTTGAGAACAGTTTCATTGTTATCATGTTGTCCAAGACCAAGGCTTCTCCAAGTGGGGCATCAACCGCATCTGCACCAGCACCTAGTGCTACACAGCCACAGACAGTAGCTACACCTCAGGTTTCTGCTCCTACTGCCTCAGTTCCAGTTCCTACAAGTGGAACTGCAACCGCTGCAGCTCCAGCTACTGCTGCTTCGGTTCAGACAGATGTGTATGGTCAAGCAGCATCAAACCTTGTTGCTGGAACTACTTTAGAGTCCACTGTTCAGCAAATTCTTGATATGGGTGGAGGTAGTTGGGACCGTGACACTGTTGTTCGTGCTCTGAGAGCTGCGTTCAACAATCCTGAAAGAGCTGTTGAATACCTGTACTCGGGTATCCCTGCTCAAGCTGAAATCCCACCAGTTGCTCAAGCCCCAGCTACTGGGGAACAGGCAGCCAATCCTCTAGCACAGCCCCAACAAGCAGCAGCTCCAGCAGCTGCAACTGGTGGTCCAAACGCAAATCCATTAAACCTGTTCCCCCAGGGCATGCCCGCTGCAGATGCTGGTGCTGGAGCTGGTAATCTTGATTTCCTGCGTAACAGTCAACAGTTCCAAGCCTTGCGAGCTATGGTACAAGCAAACCCACAAATTCTACAGCCTATGCTTCAGGAGCTCGGTAAACAAAACCCCCAGCTTGTGCGACTAATTCAAGAGCACCAGGCTGACTTCCTACGCTTGATAAACGAACCTGTCGAGGGAGAAGAGTGGGAATGTTATGGAACAGTTGGAAGCAGCAATGCCACAAGCTGTTACCGTTACACCTGAAGAGCGTGAAGCCATTGAACGGCTTGAAGGGATGGGGTTTGATCGTGCGATGGTCTTGGAAGTGTTCTTTGCGTGTAACAAGAATGAAGAACTTGCAGCTAATTACCTTCTAGATCACATGCATGAGTTTGAAGATCAATAAACAGAGCAAATCCATTCCTCCCTCTAAACTCAGACCATCTTTCTGTTTCTTTTTCTTCTTCTTTTTAATATGATAATCTCTTCTCCAATGCCATTTGACAGTTTCATGTTTATGTTCATGGGAGTTGATGTGTTTATGTTACTATTAAAACTATCATAGTTTATCTGGTTTGAAGATGCTCCTCTTTTATCATATTATTAGCCTTTGAATC - >AT5G38470.1
CTCTCTCTATACTTTGCTTCTCTCTCTAAACTTCTCTCTTTCTTTTTTTCTCAAAGCTTTTTTCCTTCTCCCTAAACGATGAAGATTTTCGTGAAGACTCTCAGTGGTTCGAACTTCGAGATCGAAGTAAAACCTGCAGATAAGGTTTCTGATGTTAAAACGGCTATAGAAACTGTTAAAGGTGCAGAATACCCTGCTGCTAAGCAGATGCTGATCCACCAAGGAAAGGTTCTAAAGGATGAGACCACATTGGAAGAGAACAATGTTGTTGAGAACAGTTTCATTGTTATCATGTTGTCCAAGACCAAGGCTTCTCCAAGTGGGGCATCAACCGCATCTGCACCAGCACCTAGTGCTACACAGCCACAGACAGTAGCTACACCTCAGGTTTCTGCTCCTACTGCCTCAGTTCCAGTTCCTACAAGTGGAACTGCAACCGCTGCAGCTCCAGCTACTGCTGCTTCGGTTCAGACAGATGTGTATGGTCAAGCAGCATCAAACCTTGTTGCTGGAACTACTTTAGAGTCCACTGTTCAGCAAATTCTTGATATGGGTGGAGGTAGTTGGGACCGTGACACTGTTGTTCGTGCTCTGAGAGCTGCGTTCAACAATCCTGAAAGAGCTGTTGAATACCTGTACTCGGGTATCCCTGCTCAAGCTGAAATCCCACCAGTTGCTCAAGCCCCAGCTACTGGGGAACAGGCAGCCAATCCTCTAGCACAGCCCCAACAAGCAGCAGCTCCAGCAGCTGCAACTGGTGGTCCAAACGCAAATCCATTAAACCTGTTCCCCCAGGGCATGCCCGCTGCAGATGCTGGTGCTGGAGCTGGTAATCTTGATTTCCTGCGTAACAGTCAACAGTTCCAAGCCTTGCGAGCTATGGTACAAGCAAACCCACAAATTCTACAGCCTATGCTTCAGGAGCTCGGTAAACAAAACCCCCAGCTTGTGCGACTAATTCAAGAGCACCAGGCTGACTTCCTACGCTTGATAAACGAACCTGTCGAGGGAGAAGAGTGGGAATGTTATGGAACAGTTGGAAGCAGCAATGCCACAAGCTGTTACCGTTACACCTGAAGAGCGTGAAGCCATTGAACGGCTTGAAGGGATGGGGTTTGATCGTGCGATGGTCTTGGAAGTGTTCTTTGCGTGTAACAAGAATGAAGAACTTGCAGCTAATTACCTTCTAGATCACATGCATGAGTTTGAAGATCAATAAACAGAGCAAATCCATTCCTCCCTCTAAACTCAGACCATCTTTCTGTTTCTTTTTCTTCTTCTTTTTAATATGATAATCTCTTCTCCAATGCCATTTGACAGTTTCATGTTTATGTTCATGGGAGTTGATGTGTTTATGTTACTATTAAAACTATCATAGTTTATCTGGTTTGAAGATGCTCCTCTTTTATCATATTATTAGCCTTTGAATC
CDS Sequence
Protein Sequence