Gene Details:

• Gene ID: AT5G38410
• Gene Symbol: RBCS3B
• Gene Name: Rubisco small subunit 3B
• Description: Ribulose bisphosphate carboxylase (small chain) family protein;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G38410.1     AT5G38410.2     AT5G38410.3

Plant Ontology Annotations:

• PO:0000282  — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
• PO:0005020  — vascular bundle — haz vascular (Spanish, exact), vein (exact), 維管束 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Function-related keywords:

• trichome ,  vascular bundle ,  guard cell

Literature:

• Cell cycle-regulated gene expression in Arabidopsis.   DOI:  10.1074/jbc.M207570200 ;  PMID:  12169696
• Global and hormone-induced gene expression changes during shoot development in Arabidopsis.   DOI:  10.1105/tpc.006668 ;  PMID:  12417700
• Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression.   DOI:  10.1105/tpc.011056 ;  PMID:  12671088
• The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress.   DOI:  10.1046/j.1365-313x.2003.01734.x ;  PMID:  12753580
• A new approach for plant proteomics: characterization of chloroplast proteins of Arabidopsis thaliana by top-down mass spectrometry.   DOI:  10.1074/mcp.M300069-MCP200 ;  PMID:  14506204
• PathMAPA: a tool for displaying gene expression and performing statistical tests on metabolic pathways at multiple levels for Arabidopsis.   DOI:  10.1186/1471-2105-4-56 ;  PMID:  14604444
• Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins.   DOI:  10.1002/rcm.1376 ;  PMID:  15052571
• Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification.   DOI:  10.1016/j.phytochem.2004.03.026 ;  PMID:  15276459
• Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors.   DOI:  10.1105/tpc.104.023309 ;  PMID:  15273297
• Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism.   DOI:  10.1105/tpc.104.023705 ;  PMID:  15377757
• Maximizing the efficacy of SAGE analysis identifies novel transcripts in Arabidopsis.   DOI:  10.1104/pp.104.043406 ;  PMID:  15489285
• Transcriptional similarities, dissimilarities, and conservation of cis-elements in duplicated genes of Arabidopsis.   DOI:  10.1104/pp.104.046466 ;  PMID:  15489284
• Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics.   DOI:  10.1002/pmic.200400882 ;  PMID:  15593128
• High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.   DOI:  10.1007/s11103-005-0699-3 ;  PMID:  15821981
• Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.   DOI:  10.1002/elps.200410399 ;  PMID:  15971193
• A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth.   DOI:  10.1104/pp.105.069690 ;  PMID:  16377748
• Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis.   DOI:  10.1104/pp.105.070508 ;  PMID:  16500996
• Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays.   DOI:  10.1007/s10142-005-0014-z ;  PMID:  16463051
• The heavy metal hyperaccumulator Thlaspi caerulescens expresses many species-specific genes, as identified by comparative expressed sequence tag analysis.   DOI:  10.1111/j.1469-8137.2006.01714.x ;  PMID:  16684236
• Characterization of an Arabidopsis thaliana mutant lacking a cytosolic non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase.   DOI:  10.1007/s11103-006-0060-5 ;  PMID:  16927206
• The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature.   DOI:  10.1111/j.1365-313X.2006.02821.x ;  PMID:  16923014
• Alternative and effective proteomic analysis in Arabidopsis.   DOI:  10.1002/pmic.200700346 ;  PMID:  17828791
• Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes.   DOI:  10.1094/MPMI-21-2-0244 ;  PMID:  18184068
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• A polyadenylation factor subunit implicated in regulating oxidative signaling in Arabidopsis thaliana.   DOI:  10.1371/journal.pone.0002410 ;  PMID:  18545667
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana.   DOI:  10.1186/gb-2008-9-8-r129 ;  PMID:  18710526
• Unique and overlapping expression patterns among members of photosynthesis-associated nuclear gene families in Arabidopsis.   DOI:  10.1104/pp.108.126946 ;  PMID:  18820083
• RBCS1A and RBCS3B, two major members within the Arabidopsis RBCS multigene family, function to yield sufficient Rubisco content for leaf photosynthetic capacity.   DOI:  10.1093/jxb/err434 ;  PMID:  22223809
• Increased expression of a phloem membrane protein encoded by NHL26 alters phloem export and sugar partitioning in Arabidopsis.   DOI:  10.1105/tpc.113.111849 ;  PMID:  23715470
• Arabidopsis Pol II-Dependent in Vitro Transcription System Reveals Role of Chromatin for Light-Inducible rbcS Gene Transcription.   DOI:  10.1104/pp.15.01614 ;  PMID:  26662274
• RT-qPCR demonstrates light-dependent AtRBCS1A and AtRBCS3B mRNA expressions in Arabidopsis thaliana leaves.   DOI:  10.1002/bmb.20959 ;  PMID:  26892037
• Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2.   DOI:  10.1126/science.aap9221 ;  PMID:  29217567
• Structure of Rubisco from Arabidopsis thaliana in complex with 2-carboxyarabinitol-1,5-bisphosphate.   DOI:  10.1107/S2059798317017132 ;  PMID:  29372894
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• Ring/U-Box Protein AtUSR1 Functions in Promoting Leaf Senescence Through JA Signaling Pathway in Arabidopsis.   DOI:  10.3389/fpls.2020.608589 ;  PMID:  33391323
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification.   DOI:  10.1016/j.phytochem.2004.03.026 ;  PMID:  15276459
• Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics.   DOI:  10.1002/pmic.200400882 ;  PMID:  15593128
• High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.   DOI:  10.1007/s11103-005-0699-3 ;  PMID:  15821981
• Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.   DOI:  10.1002/elps.200410399 ;  PMID:  15971193
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study.   DOI:  10.1016/j.phytochem.2008.04.007 ;  PMID:  18538804
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification.   DOI:  10.1016/j.phytochem.2004.03.026 ;  PMID:  15276459
• Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics.   DOI:  10.1002/pmic.200400882 ;  PMID:  15593128
• High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.   DOI:  10.1007/s11103-005-0699-3 ;  PMID:  15821981
• Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.   DOI:  10.1002/elps.200410399 ;  PMID:  15971193
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study.   DOI:  10.1016/j.phytochem.2008.04.007 ;  PMID:  18538804
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study.   DOI:  10.1016/j.phytochem.2008.04.007 ;  PMID:  18538804
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: