Information report for AT5G38120
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- The substrate specificity-determining amino acid code of 4-coumarate:CoA ligase. DOI: 10.1073/pnas.1430550100 ; PMID: 12819348
- Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases. DOI: 10.1104/pp.103.020552 ; PMID: 12805634
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof. DOI: 10.1016/s0031-9422(03)00517-x ; PMID: 14568076
- Genome-wide characterization of the lignification toolbox in Arabidopsis. DOI: 10.1104/pp.103.026484 ; PMID: 14612585
- A new type of peroxisomal acyl-coenzyme A synthetase from Arabidopsis thaliana has the catalytic capacity to activate biosynthetic precursors of jasmonic acid. DOI: 10.1074/jbc.M413578200 ; PMID: 15677481
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Light, the circadian clock, and sugar perception in the control of lignin biosynthesis. DOI: 10.1093/jxb/eri162 ; PMID: 15878986
- Characterization in vitro and in vivo of the putative multigene 4-coumarate:CoA ligase network in Arabidopsis: syringyl lignin and sinapate/sinapyl alcohol derivative formation. DOI: 10.1016/j.phytochem.2005.06.022 ; PMID: 16099486
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Identification of a peroxisomal acyl-activating enzyme involved in the biosynthesis of jasmonic acid in Arabidopsis. DOI: 10.1074/jbc.M607854200 ; PMID: 16963437
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms. DOI: 10.1046/j.1365-313x.1999.00491.x ; PMID: 10417722
Gene Resources
- UniProt: A0A1P8BFI3
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BFI3
- EnsemblPlants: AT5G38120.2, AT5G38120.4
- Gramene: AT5G38120.2, AT5G38120.4
- Orthologous matrix: LYWMPRF
- ExpressionAtlas: AT5G38120
- InterPro: IPR000873, IPR020845, IPR042099
- PANTHER: PTHR24096, PTHR24096:SF358
- SUPFAM: SSF56801
- PROSITE: PS00455
- Gene3D: 3.30.300.30, 3.40.50.12780
- SWISS-MODEL: A0A1P8BFI3
Sequences
cDNA Sequence
- >AT5G38120.2
CGACAGTCCACTTTTTACGAATATTTGTATTATAGTGAATATTTATAGTAAATAAGTAGTGAAAGATATTTAGATAGTTTCAGTGAACGTTTAACATATGCCTTATTAAGATGCTGATATTTCCATAAGGTAAGTACAACTATATGAGAGCTTGCATCAATCTAATCCAACCAAAGAATAATGGCGAATTCTCAAAGATCATCATCTCTGATCGATCCAAGGAACGGTTTCTGCACATCAAACTCCACATTTTACAGTAAACGCAAACCATTGGCACTTCCTTCAAAAGAATCACTCGACATCACAACATTCATCTCCTCCCAAACGTACCGTGGCAAAACCGCCTTCATAGACGCAGCCACGGACCACCGCATAAGCTTCTCCGATTTATGGATGGCCGTGGATCGTGTCGCCGACTGTCTCCTCCACGACGTGGGAATACGGAGAGGTGACGTGGTCCTAGTCCTCTCTCCCAACACCATCTCCATCCCCATTGTCTGCCTCTCCGTGATGTCTCTTGGCGCTGTCTTAACTACCGCTAATCCTCTCAACACCGCTAGTGAAATCTTAAGACAAATCGCGGATAGCAATCCAAAACTCGCCTTCACAACACCGGAACTGGCTCCCAAAATCGCCAGTTCCGGTATCTCTATCGTCCTCGAGCGCGTAGAAGACACTCTACGCGTTCCGAGAGGACTCAAAGTGGTTGGGAATCTAACTGAAATGATGAAGAAAGAACCAAGTGGACAAGCAGTCAGAAACCAAGTTCATAAAGACGACACGGCGATGTTGCTTTACTCCTCGGGGACGACGGGACGAAGCAAAGGAGTGAATTCGTCTCACGGGAACTTAATAGCACACGTGGCGAGATACATCGCGGAGCCATTCGAGCAGCCACAACAGACCTTCATTTGCACTGTTCCGTTGTTCCACACTTTTGGTTTACTAAACTTCGTTTTGGCCACCTTAGCGTTAGGTACGACCGTTGTCATCCTCCCGAGGTTTGACCTCGGAGAGATGATGGCGGCTGTCGAGAAATACAGAGCGACGACTCTGATTCTCGTGCCGCCAGTTTTAGTAACTATGATAAACAAAGCGGATCAAATAATGAAGAAGTACGACGTGAGCTTCTTGAGAACGGTGCGGTGCGGTGGAGCACCTTTGAGCAAGGAAGTTACTCAAGGGTTTATGAAGAAATATCCAACGGTTGATGTTTATCAAGGATACGCATTGACGGAATCTAACGGTGCAGGAGCTTCGATAGAATCAGTGGAGGAGAGTCGGAGGTACGGTGCGGTGGGGTTGTTGTCATGTGGTGTAGAAGCGAGGATTGTGGATCCGAATACGGGTCAGGTCATGGGTTTGAACCAAACGGGCGAACTTTGGCTTAAAGGGCCTTCTATCGCCAAAGGTTATTTCAGGAATGAAGAAGAAATTATAACTTCAGAAGGATGGCTTAAAACAGGAGATCTATGCTATATAGACAACGATGGATTTCTTTTTATCGTTGATCGATTGAAAGAGCTTATCAAATACAAAGGTTACCAGGTACCTCCAGCTGAACTAGAGGCTCTCTTACTAAACCATCCAGATATTCTCGATGCAGCCGTTATTCCGTAAAGTTTTACTATCATTTTTCTTTTCCTTGTTAAGACTTCCAAGATTTTTGCCTTTTAAACATAAAAACGACAAGAAGTTTATTTTGTTTTGTTTGAATTTTTGATTTGTTGCATGGCAAAGGTTTCCAGATAAAGAAGCAGGACAATTTCCGATGGCTTACGTAGCACGAAAGCCTGAGAGTAATCTTTGTGAGAAAAAGGTTATCGACTTTATTTCTAAACAGGTGGCACCATATAAGAAAATAAGAAAAGTCGCATTTATAGACTCTATACCAAAGACTCCATCGGGCAAAACACTTCGCAAGGATCTAATCAAATTTGCCATTTCAAAAATTTAAAAGAATCACTATTTTGTCATTTTTATTTGTATGAATTTCTGACATAATAAAAGAGAAGTTATATCCGC - >AT5G38120.4
CGACAGTCCACTTTTTACGAATATTTGTATTATAGTGAATATTTATAGTAAATAAGTAGTGAAAGATATTTAGATAGTTTCAGTGAACGTTTAACATATGCCTTATTAAGATGCTGATATTTCCATAAGGTAAGTACAACTATATGAGAGCTTGCATCAATCTAATCCAACCAAAGAATAATGGCGAATTCTCAAAGATCATCATCTCTGATCGATCCAAGGAACGGTTTCTGCACATCAAACTCCACATTTTACAGTAAACGCAAACCATTGGCACTTCCTTCAAAAGAATCACTCGACATCACAACATTCATCTCCTCCCAAACGTACCGTGGCAAAACCGCCTTCATAGACGCAGCCACGGACCACCGCATAAGCTTCTCCGATTTATGGATGGCCGTGGATCGTGTCGCCGACTGTCTCCTCCACGACGTGGGAATACGGAGAGGTGACGTGGTCCTAGTCCTCTCTCCCAACACCATCTCCATCCCCATTGTCTGCCTCTCCGTGATGTCTCTTGGCGCTGTCTTAACTACCGCTAATCCTCTCAACACCGCTAGTGAAATCTTAAGACAAATCGCGGATAGCAATCCAAAACTCGCCTTCACAACACCGGAACTGGCTCCCAAAATCGCCAGTTCCGGTATCTCTATCGTCCTCGAGCGCGTAGAAGACACTCTACGCGTTCCGAGAGGACTCAAAGTGGTTGGGAATCTAACTGAAATGATGAAGAAAGAACCAAGTGGACAAGCAGTCAGAAACCAAGTTCATAAAGACGACACGGCGATGTTGCTTTACTCCTCGGGGACGACGGGACGAAGCAAAGGAGTGAATTCGTCTCACGGGAACTTAATAGCACACGTGGCGAGATACATCGCGGAGCCATTCGAGCAGCCACAACAGACCTTCATTTGCACTGTTCCGTTGTTCCACACTTTTGGTTTACTAAACTTCGTTTTGGCCACCTTAGCGTTAGGTACGACCGTTGTCATCCTCCCGAGGTTTGACCTCGGAGAGATGATGGCGGCTGTCGAGAAATACAGAGCGACGACTCTGATTCTCGTGCCGCCAGTTTTAGTAACTATGATAAACAAAGCGGATCAAATAATGAAGAAGTACGACGTGAGCTTCTTGAGAACGGTGCGGTGCGGTGGAGCACCTTTGAGCAAGGAAGTTACTCAAGGGTTTATGAAGAAATATCCAACGGTTGATGTTTATCAAGGATACGCATTGACGGAATCTAACGGTGCAGGAGCTTCGATAGAATCAGTGGAGGAGAGTCGGAGGTACGGTGCGGTGGGGTTGTTGTCATGTGGTGTAGAAGCGAGGATTGTGGATCCGAATACGGGTCAGGTCATGGGTTTGAACCAAACGGGCGAACTTTGGCTTAAAGGGCCTTCTATCGCCAAAGGTTATTTCAGGAATGAAGAAGAAATTATAACTTCAGAAGGATGGCTTAAAACAGGAGATCTATGCTATATAGACAACGATGGATTTCTTTTTATCGTTGATCGATTGAAAGAGCTTATCAAATACAAAGGTTACCAGGTACCTCCAGCTGAACTAGAGGCTCTCTTACTAAACCATCCAGATATTCTCGATGCAGCCGTTATTCCGTAAAGTTTTACTATCATTTTTCTTTTCCTTGTTAAGACTTCCAAGATTTTTGCCTTTTAAACATAAAAACGACAAGAAGTTTATTTTGTTTTGTTTGAATTTTTGATTTGTTGCATGGCAAAGGTTTCCAGATAAAGAAGCAGGACAATTTCCGATGGCTTACGTAGCACGAAAGCCTGAGAGTAATCTTTGTGAGAAAAAGGTTATCGACTTTATTTCTAAACAGGTGGCACCATATAAGAAAATAAGAAAAGTCGCATTTATAGACTCTATACCAAAGACTCCATCGGGCAAAACACTTCGCAAGGATCTAATCAAATTTGCCATTTCAAAAATTTAAAAGAATCACTATTTTGTCATTTTTATTTGTATGAATTTCTGACATAATAAAAGAGAAGTTATATCCGC - >AT5G38120.1
CGACAGTCCACTTTTTACGAATATTTGTATTATAGTGAATATTTATAGTAAATAAGTAGTGAAAGATATTTAGATAGTTTCAGTGAACGTTTAACATATGCCTTATTAAGATGCTGATATTTCCATAAGGTAAGTACAACTATATGAGAGCTTGCATCAATCTAATCCAACCAAAGAATAATGGCGAATTCTCAAAGATCATCATCTCTGATCGATCCAAGGAACGGTTTCTGCACATCAAACTCCACATTTTACAGTAAACGCAAACCATTGGCACTTCCTTCAAAAGAATCACTCGACATCACAACATTCATCTCCTCCCAAACGTACCGTGGCAAAACCGCCTTCATAGACGCAGCCACGGACCACCGCATAAGCTTCTCCGATTTATGGATGGCCGTGGATCGTGTCGCCGACTGTCTCCTCCACGACGTGGGAATACGGAGAGGTGACGTGGTCCTAGTCCTCTCTCCCAACACCATCTCCATCCCCATTGTCTGCCTCTCCGTGATGTCTCTTGGCGCTGTCTTAACTACCGCTAATCCTCTCAACACCGCTAGTGAAATCTTAAGACAAATCGCGGATAGCAATCCAAAACTCGCCTTCACAACACCGGAACTGGCTCCCAAAATCGCCAGTTCCGGTATCTCTATCGTCCTCGAGCGCGTAGAAGACACTCTACGCGTTCCGAGAGGACTCAAAGTGGTTGGGAATCTAACTGAAATGATGAAGAAAGAACCAAGTGGACAAGCAGTCAGAAACCAAGTTCATAAAGACGACACGGCGATGTTGCTTTACTCCTCGGGGACGACGGGACGAAGCAAAGGAGTGAATTCGTCTCACGGGAACTTAATAGCACACGTGGCGAGATACATCGCGGAGCCATTCGAGCAGCCACAACAGACCTTCATTTGCACTGTTCCGTTGTTCCACACTTTTGGTTTACTAAACTTCGTTTTGGCCACCTTAGCGTTAGGTACGACCGTTGTCATCCTCCCGAGGTTTGACCTCGGAGAGATGATGGCGGCTGTCGAGAAATACAGAGCGACGACTCTGATTCTCGTGCCGCCAGTTTTAGTAACTATGATAAACAAAGCGGATCAAATAATGAAGAAGTACGACGTGAGCTTCTTGAGAACGGTGCGGTGCGGTGGAGCACCTTTGAGCAAGGAAGTTACTCAAGGGTTTATGAAGAAATATCCAACGGTTGATGTTTATCAAGGATACGCATTGACGGAATCTAACGGTGCAGGAGCTTCGATAGAATCAGTGGAGGAGAGTCGGAGGTACGGTGCGGTGGGGTTGTTGTCATGTGGTGTAGAAGCGAGGATTGTGGATCCGAATACGGGTCAGGTCATGGGTTTGAACCAAACGGGCGAACTTTGGCTTAAAGGGCCTTCTATCGCCAAAGGTTATTTCAGGAATGAAGAAGAAATTATAACTTCAGAAGGATGGCTTAAAACAGGAGATCTATGCTATATAGACAACGATGGATTTCTTTTTATCGTTGATCGATTGAAAGAGCTTATCAAATACAAAGGTTACCAGGTACCTCCAGCTGAACTAGAGGCTCTCTTACTAAACCATCCAGATATTCTCGATGCAGCCGTTATTCCGTAAAGTTTTACTATCATTTTTCTTTTCCTTGTTAAGACTTCCAAGATTTTTGCCTTTTAAACATAAAAACGACAAGAAGTTTATTTTGTTTTGTTTGAATTTTTGATTTGTTGCATGGCAAAGGTTTCCAGATAAAGAAGCAGGACAATTTCCGATGGCTTACGTAGCACGAAAGCCTGAGAGTAATCTTTGTGAGAAAAAGGTTATCGACTTTATTTCTAAACAGGTGGCACCATATAAGAAAATAAGAAAAGTCGCATTTATAGACTCTATACCAAAGACTCCATCGGGCAAAACACTTCGCAAGGATCTAATCAAATTTGCCATTTCAAAAATTTAAAAGAATCACTATTTTGTCATTTTTATTTGTATGAATTTCTGACATAATAAAAGAGAAGTTATATCCGC - >AT5G38120.3
CGACAGTCCACTTTTTACGAATATTTGTATTATAGTGAATATTTATAGTAAATAAGTAGTGAAAGATATTTAGATAGTTTCAGTGAACGTTTAACATATGCCTTATTAAGATGCTGATATTTCCATAAGGTAAGTACAACTATATGAGAGCTTGCATCAATCTAATCCAACCAAAGAATAATGGCGAATTCTCAAAGATCATCATCTCTGATCGATCCAAGGAACGGTTTCTGCACATCAAACTCCACATTTTACAGTAAACGCAAACCATTGGCACTTCCTTCAAAAGAATCACTCGACATCACAACATTCATCTCCTCCCAAACGTACCGTGGCAAAACCGCCTTCATAGACGCAGCCACGGACCACCGCATAAGCTTCTCCGATTTATGGATGGCCGTGGATCGTGTCGCCGACTGTCTCCTCCACGACGTGGGAATACGGAGAGGTGACGTGGTCCTAGTCCTCTCTCCCAACACCATCTCCATCCCCATTGTCTGCCTCTCCGTGATGTCTCTTGGCGCTGTCTTAACTACCGCTAATCCTCTCAACACCGCTAGTGAAATCTTAAGACAAATCGCGGATAGCAATCCAAAACTCGCCTTCACAACACCGGAACTGGCTCCCAAAATCGCCAGTTCCGGTATCTCTATCGTCCTCGAGCGCGTAGAAGACACTCTACGCGTTCCGAGAGGACTCAAAGTGGTTGGGAATCTAACTGAAATGATGAAGAAAGAACCAAGTGGACAAGCAGTCAGAAACCAAGTTCATAAAGACGACACGGCGATGTTGCTTTACTCCTCGGGGACGACGGGACGAAGCAAAGGAGTGAATTCGTCTCACGGGAACTTAATAGCACACGTGGCGAGATACATCGCGGAGCCATTCGAGCAGCCACAACAGACCTTCATTTGCACTGTTCCGTTGTTCCACACTTTTGGTTTACTAAACTTCGTTTTGGCCACCTTAGCGTTAGGTACGACCGTTGTCATCCTCCCGAGGTTTGACCTCGGAGAGATGATGGCGGCTGTCGAGAAATACAGAGCGACGACTCTGATTCTCGTGCCGCCAGTTTTAGTAACTATGATAAACAAAGCGGATCAAATAATGAAGAAGTACGACGTGAGCTTCTTGAGAACGGTGCGGTGCGGTGGAGCACCTTTGAGCAAGGAAGTTACTCAAGGGTTTATGAAGAAATATCCAACGGTTGATGTTTATCAAGGATACGCATTGACGGAATCTAACGGTGCAGGAGCTTCGATAGAATCAGTGGAGGAGAGTCGGAGGTACGGTGCGGTGGGGTTGTTGTCATGTGGTGTAGAAGCGAGGATTGTGGATCCGAATACGGGTCAGGTCATGGGTTTGAACCAAACGGGCGAACTTTGGCTTAAAGGGCCTTCTATCGCCAAAGGTTATTTCAGGAATGAAGAAGAAATTATAACTTCAGAAGGATGGCTTAAAACAGGAGATCTATGCTATATAGACAACGATGGATTTCTTTTTATCGTTGATCGATTGAAAGAGCTTATCAAATACAAAGGTTACCAGGTACCTCCAGCTGAACTAGAGGCTCTCTTACTAAACCATCCAGATATTCTCGATGCAGCCGTTATTCCGTAAAGTTTTACTATCATTTTTCTTTTCCTTGTTAAGACTTCCAAGATTTTTGCCTTTTAAACATAAAAACGACAAGAAGTTTATTTTGTTTTGTTTGAATTTTTGATTTGTTGCATGGCAAAGGTTTCCAGATAAAGAAGCAGGACAATTTCCGATGGCTTACGTAGCACGAAAGCCTGAGAGTAATCTTTGTGAGAAAAAGGTTATCGACTTTATTTCTAAACAGGTGGCACCATATAAGAAAATAAGAAAAGTCGCATTTATAGACTCTATACCAAAGACTCCATCGGGCAAAACACTTCGCAAGGATCTAATCAAATTTGCCATTTCAAAAATTTAAAAGAATCACTATTTTGTCATTTTTATTTGTATGAATTTCTGACATAATAAAAGAGAAGTTATATCCGC
CDS Sequence
Protein Sequence