Information report for AT5G38110
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0005660 — hydathode — hidatodo (Spanish, exact), 排水組織 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009062 — gynoecium — ginoecio (Spanish, exact), gynaecium (exact), gynoecia (exact, plural), 雌蕊群 (Japanese, exact), Poaceae gynoecium (narrow), Zea gynoecium (narrow), apocarpous gynoecium (narrow), gynoecium of ear floret (narrow), gynoecium of lower floret of pedicellate spikelet of ear (narrow), gynoecium of lower floret of pedicellate spikelet of tassel (narrow), gynoecium of lower floret of sessile spikelet of ear (narrow), gynoecium of lower floret of sessile spikelet of tassel (narrow), gynoecium of tassel floret (narrow), gynoecium of upper floret of pedicellate spikelet of ear (narrow), gynoecium of upper floret of pedicellate spikelet of tassel (narrow), gynoecium of upper floret of sessile spikelet of ear (narrow), gynoecium of upper floret of sessile spikelet of tassel (narrow), syncarpous gynoecium (narrow), pistil (broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
Literature and News
- BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis. DOI: 10.1101/gad.295404 ; PMID: 15082530
- TOUSLED kinase activity oscillates during the cell cycle and interacts with chromatin regulators. DOI: 10.1104/pp.103.038117 ; PMID: 15047893
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- Arabidopsis homologues of the histone chaperone ASF1 are crucial for chromatin replication and cell proliferation in plant development. DOI: 10.1111/j.1365-313X.2011.04504.x ; PMID: 21251110
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- ANTI-SILENCING FUNCTION1 proteins are involved in ultraviolet-induced DNA damage repair and are cell cycle regulated by E2F transcription factors in Arabidopsis. DOI: 10.1104/pp.112.212837 ; PMID: 23596192
- Nuclear Chaperone ASF1 is Required for Gametogenesis in Arabidopsis thaliana. DOI: 10.1038/s41598-019-50450-3 ; PMID: 31562367
- Gametophytic Abortion in Heterozygotes but Not in Homozygotes: Implied Chromosome Rearrangement during T-DNA Insertion at the ASF1 Locus in Arabidopsis. DOI: 10.14348/molcells.2020.2290 ; PMID: 32259880
- RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation. DOI: 10.1073/pnas.0706986104 ; PMID: 17827277
Gene Resources
- UniProt: A0A178UQ02
- EMBL: CACSHJ010000096, LR881470, LUHQ01000005
- AlphaFoldDB: A0A178UQ02
- EnsemblPlants: AT5G38110.1
- Gramene: AT5G38110.1
- KEGG: ath:AT5G38110
- Orthologous matrix: DYADQEM
- ExpressionAtlas: AT5G38110
- InterPro: IPR006818, IPR036747
- PANTHER: PTHR12040, PTHR12040:SF18
- SUPFAM: SSF101546
- Gene3D: 2.60.40.1490
- OrthoDB: A0A178UQ02
- SWISS-MODEL: A0A178UQ02
Sequences
cDNA Sequence
- >AT5G38110.1
TTTTAAAGCTCTCCCGCCAATATAGTTGACCGGTAACTACCGGTTATTAGCCTTATACCAACCGGTTAAAAAAAAACCACCCAATAACTGGCAAATTGAAATCGCTCTAACCACGAACCGTCTCTGAATCTGACCGACCACCATTCTTCTCGCGCCGGCGATTTCACTGTTTACAGAGAAATCTCGAGAACCCTAACCTGGGTCTCTCTAGATTTCTTTGAAATTTCGAGAATCTAGGGTTTCAAACTAAAATCGAGTCCTTGAGTTTTCCCAATTTAAATCGTTATGAGCTCTATCAATATCACTAACGTCACCGTCTTGGACAATCCTGCTCCGTTTGTGAATCCATTCCAGTTCGAGATTTCTTACGAATGCTTGACCTCTCTCAAAGACGATTTGGAATGGAAGCTTATATACGTAGGGTCAGCTGAAGACGAAACGTATGATCAAGTTTTGGAAAGTGTTCTTGTTGGTCCTGTTAACGTTGGGAACTATCGATTTGTGTTGCAGGCTGACTCTCCAGATCCGTTAAAGATTCGTGAGGAAGATATTATTGGTGTTACTGTGTTATTGTTGACTTGCTCATACATGGATCAAGAGTTTATAAGAGTTGGCTATTATGTGAACAATGACTATGATGATGAACAGCTCAGGGAAGAGCCTCCTACCAAGGTTTTGATTGATAAGGTCCAAAGGAACATACTCACAGACAAACCTAGAGTAACTAAGTTCCCTATCAACTTTCATCCTGAGAATGAGCAGACTCTTGGTGATGGGCCTGCACCTACTGAACCATTTGCTGATTCTGTTGTAAATGGAGAAGCTCCGGTGTTTCTTGAGCAGCCACAAAAGCTTCAGGAGATAGAACAATTTGATGATTCTGATGTAAATGGAGAAGCTATAGCGTTGCTTGATCAGCCACAAAATCTCCAGGAGACATGATTCTTGTTTGACTCAAGCTTAACTGGAAACTGGATTAGAACTATCATCTCAATTCTAATCGAAAGATTTGTATTTTTGTTTCTTTTATCTGGAACTTGAACTCCAGTTGTGTTACTGTTTGTAGAAATTTAAGTTCTTCTTGCAACATCCCTATACTGTGCTATGTTCAGAGTTCTTAGTTCCCATTCTTCTTGTTATCCTAGTGGCTAATGCAAGCAGATCATTGCAAACACTAACAATTCACTTGAAGATAGTTGTTTAAGAAATGCAC
CDS Sequence
Protein Sequence