Gene Details:
- Gene ID: AT5G37490
- Gene Symbol: CMPG5, PUB21
- Gene Name:
- Description: ARM repeat superfamily protein;(source:Araport11)
- TAIR Accession: locus:2169861
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0005737 — located in — cytoplasm
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0010035 — acts upstream of or within — response to inorganic substance
Function-related keywords:
Literature:
- The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. DOI: 10.1104/pp.103.036749 ; PMID: 15181213
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Arabidopsis PUB22 and PUB23 are homologous U-Box E3 ubiquitin ligases that play combinatory roles in response to drought stress. DOI: 10.1105/tpc.108.060699 ; PMID: 18664614
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Sequences:
cDNA Sequence
- >AT5G37490.1
CTGAGATTTAGTCCACAATAATTAACTACAGAACTAACCTCAACGAACTAATCAACTGAAAGTTCTTTTATTCCTTGAAAAATTCAATGGTCAAAAGTTTCCAGTCCCTAGACCAACACAACTTGCAAATTAGACCTAATTAAACCTTCCTCATTCTCTCTTTTCCCCTAATTTTGACCAACAAATATTGACTTAGAAAAAAAAAACCATTACATATAAATATAATCTCATCCCAACCCAAAATCTTAAAACCCAAGTCAATACTATTGACGTCAACCAAAACAAAAAAGTCACTATTTTTGCATTTTACAAAACATGGGTTTTTTATGGAGAACGAGATCTAACGAGAAGAAGATAACTCCGGTTTTGAGTTGGCCGGAATCAGAACCGGAGTCAGAGATAACAATTCCACCGGAGTTTCAATGTCCAATCTCGATCGATCTAATGAAAGATCCAGTAATAATCTCAACAGGCATTACTTACGACCGCGTAAGCATCGAAACATGGATCAATTCAGGCAACAAAACATGTCCAGTCACGAACACTGTCTTAACCACGTTCGATCAAATCCCAAACCACACGATTCGTAAGATGATTCAAGGATGGTGCGTGGAGAAAGGATCGCCGTTGATTCAACGTATTCCGACGCCACGTGTCCCTTTAATGCCATGTGAGGTCTACGAGATTAGTAGAAAATTATCGTCTGCGACGCGGCGTGGGGATTACGAGAAATGTGGGGTGATTATTGAGAAGATTAAGAAGTTAGGGGATGAGAGTGAGAAAAATCGAAAGTGTGTTAATGAAAACAGCGTCGGATGGGTTCTTTGTGATTGTTTCGACAAGTTCTCGGGAGATGAGAAATTAACGTTTATGTTGAATGAGATTTTGTCTTTGCTGACGTGGATGTTTCCGATTGGTTTAGAGGGTATTTCGAAACTCGCGTCTGCGACATCATTTCGTTGCGTGGCGGGTTTGTTGAAGAGTACGGATGATTCCGTTCGTCAAAACGCCGCGTTTATTATGAAGGAGATTCTCTCATTAGACGAAACGCGAGTTCACTCGTTTGCGGTTGAGAACGGAGTCGCCGAAGCGTTAGTAAAGTTGATTCGCGATTCGGTTTCGTCTAGTTCAACAAAATCTTCGTTGATAGCGATTTATCAAATGGTGTTGCAAAAGCCTGAAATCGCGTCGGAGTTTCTCGAAATTGGTTTGGTGAGTATAACGGTGGAGATGATCGTTGATGCCGAGAATAGCGTTTGTGAAAAAGCGTTAGCGGTTCTTGACGCGATTTGCGAAACAGAACATGGTAGAGAGGAAGTGAGGAAAAATGCGTTGGTGATGCCGCTTTTGGTGAAGAAGATTGCGAAGGTTTCTGAATTAGCGACTAGGAGCTCAATGTCAATGATTTTGAAGCTGTGGAAAACAGGAAACACGGTTGCGGTTGAAGATGCGGTGCGTTTGGGCGCGTTTCAGAAGGTGTTGCTTGTGTTGCAAGTTGGGTATGGAGAAGAGACTAAGGAGAAAGCGACAGAGTTGTTGAAGATGATGAATACACAAATGAAATTGATGAGTGATTGTGTTGATTCTTTAAAAGAGTTTAAGTATATCAAAAAGCCATTTTGACATAAACGACAGATTAGATTTCAACTAATAATACAAAAACCTTTGAAAGAAACATTGAATCTTGGGGATCAAGCAAATATTTTGGGCCCCCAACAATGGT
CDS Sequence
Protein Sequence