Gene Details:

• Gene ID: AT5G37260
• Gene Symbol: CIR1, RVE2
• Gene Name: CIRCADIAN 1, REVEILLE 2
• Description: Homeodomain-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2169135
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G37260.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0007623  — acts upstream of or within — circadian rhythm
• GO:0005515  — enables — protein binding
• GO:0009909  — acts upstream of or within — regulation of flower development
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0009845  — acts upstream of or within — seed germination
• GO:0005634  — located in — nucleus
• GO:0003700  — enables — DNA-binding transcription factor activity

Function-related keywords:

• root

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Overexpression of spermidine synthase enhances tolerance to multiple environmental stresses and up-regulates the expression of various stress-regulated genes in transgenic Arabidopsis thaliana.   DOI:  10.1093/pcp/pch083 ;  PMID:  15215506
• Regulation of flowering time in Arabidopsis by K homology domain proteins.   DOI:  10.1073/pnas.0404552101 ;  PMID:  15310842
• The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.   DOI:  10.1104/pp.105.068171 ;  PMID:  16258011
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Expression profiling and local adaptation of Boechera holboellii populations for water use efficiency across a naturally occurring water stress gradient.   DOI:  10.1111/j.1365-294X.2006.02818.x ;  PMID:  16626450
• Functional profiling reveals that only a small number of phytochrome-regulated early-response genes in Arabidopsis are necessary for optimal deetiolation.   DOI:  10.1105/tpc.106.042200 ;  PMID:  16891401
• Co-expression of the stress-inducible zinc finger homeodomain ZFHD1 and NAC transcription factors enhances expression of the ERD1 gene in Arabidopsis.   DOI:  10.1111/j.1365-313X.2006.02932.x ;  PMID:  17233795
• PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth.   DOI:  10.1105/tpc.106.045658 ;  PMID:  17220200
• Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings.   DOI:  10.1111/j.1365-313X.2006.02979.x ;  PMID:  17217462
• Constitutive expression of CIR1 (RVE2) affects several circadian-regulated processes and seed germination in Arabidopsis.   DOI:  10.1111/j.1365-313X.2007.03156.x ;  PMID:  17587236
• A putative CCAAT-binding transcription factor is a regulator of flowering timing in Arabidopsis.   DOI:  10.1104/pp.107.102079 ;  PMID:  17631525
• Light has a specific role in modulating Arabidopsis gene expression at low temperature.   DOI:  10.1186/1471-2229-8-13 ;  PMID:  18230142
• Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes.   DOI:  10.1104/pp.107.115592 ;  PMID:  18305208
• Knocking out cytosolic cysteine synthesis compromises the antioxidant capacity of the cytosol to maintain discrete concentrations of hydrogen peroxide in Arabidopsis.   DOI:  10.1104/pp.108.117408 ;  PMID:  18441224
• REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways.   DOI:  10.1073/pnas.0813035106 ;  PMID:  19805390
• A DEAD box RNA helicase is critical for pre-mRNA splicing, cold-responsive gene regulation, and cold tolerance in Arabidopsis.   DOI:  10.1105/tpc.112.108340 ;  PMID:  23371945
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• Phytochrome B and REVEILLE1/2-mediated signalling controls seed dormancy and germination in Arabidopsis.   DOI:  10.1038/ncomms12377 ;  PMID:  27506149
• FHY3 interacts with phytochrome B and regulates seed dormancy and germination.   DOI:  10.1093/plphys/kiab147 ;  PMID:  33764465
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103

Sequences: