Gene Details:

• Gene ID: AT5G37055
• Gene Symbol: ATSWC6, SEF
• Gene Name: SERRATED LEAVES AND EARLY FLOWERING
• Description: HIT-type Zinc finger family protein;(source:Araport11)
• TAIR Accession: locus:505006661
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G37055.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000014  — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0009049  — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)

Gene Ontology:

• GO:0005634  — located in — nucleus
• GO:0042742  — acts upstream of or within — defense response to bacterium
• GO:0005515  — enables — protein binding
• GO:0009909  — acts upstream of or within — regulation of flower development
• GO:0000812  — part of — Swr1 complex
• GO:0031491  — enables — nucleosome binding
• GO:0000812  — located in — Swr1 complex
• GO:0048638  — acts upstream of or within — regulation of developmental growth
• GO:0006338  — involved in — chromatin remodeling
• GO:0042802  — enables — identical protein binding

Function-related keywords:

• root ,  rosette leaf ,  shoot axis apex ,  root ,  vascular leaf ,  stem ,  inflorescence

Literature:

• SEF, a new protein required for flowering repression in Arabidopsis, interacts with PIE1 and ARP6.   DOI:  10.1104/pp.106.092270 ;  PMID:  17142478
• Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development.   DOI:  10.1242/dev.001891 ;  PMID:  17470967
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Imaging of endogenous messenger RNA splice variants in living cells reveals nuclear retention of transcripts inaccessible to nonsense-mediated decay in Arabidopsis.   DOI:  10.1105/tpc.113.118075 ;  PMID:  24532591
• Regulation of MicroRNA-Mediated Developmental Changes by the SWR1 Chromatin Remodeling Complex.   DOI:  10.1104/pp.16.00332 ;  PMID:  27208270
• SKIP controls flowering time via the alternative splicing of SEF pre-mRNA in Arabidopsis.   DOI:  10.1186/s12915-017-0422-2 ;  PMID:  28893254
• H2A.Z promotes the transcription of MIR156A and MIR156C in Arabidopsis by facilitating the deposition of H3K4me3.   DOI:  10.1242/dev.152868 ;  PMID:  29361556
• Arabidopsis SWC4 Binds DNA and Recruits the SWR1 Complex to Modulate Histone H2A.Z Deposition at Key Regulatory Genes.   DOI:  10.1016/j.molp.2018.03.014 ;  PMID:  29604400
• A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding.   DOI:  10.15252/embj.2019102008 ;  PMID:  32115743
• Histone H2A.Z and homologues of components of the SWR1 complex are required to control immunity in Arabidopsis.   DOI:  10.1111/j.1365-313X.2007.03361.x ;  PMID:  17988222

Sequences: