Information report for AT5G36890
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009866 — involved in — induced systemic resistance, ethylene mediated signaling pathway
- GO:0019748 — involved in — secondary metabolic process
- GO:0009507 — located in — chloroplast
- GO:0030245 — involved in — cellulose catabolic process
- GO:0008422 — enables — beta-glucosidase activity
- GO:0009617 — involved in — response to bacterium
- GO:1990641 — involved in — response to iron ion starvation
- GO:0031349 — involved in — positive regulation of defense response
- GO:0102483 — enables — scopolin beta-glucosidase activity
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response. DOI: 10.1105/tpc.104.024315 ; PMID: 15539473
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1. DOI: 10.1007/s11103-004-0790-1 ; PMID: 15604686
- Ethylene and nitric oxide involvement in the up-regulation of key genes related to iron acquisition and homeostasis in Arabidopsis. DOI: 10.1093/jxb/erq203 ; PMID: 20627899
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- β-Glucosidase BGLU42 is a MYB72-dependent key regulator of rhizobacteria-induced systemic resistance and modulates iron deficiency responses in Arabidopsis roots. DOI: 10.1111/nph.12980 ; PMID: 25138267
- Multiplex Fluorescent, Activity-Based Protein Profiling Identifies Active α-Glycosidases and Other Hydrolases in Plants. DOI: 10.1104/pp.18.00250 ; PMID: 29555787
- MYB72-dependent coumarin exudation shapes root microbiome assembly to promote plant health. DOI: 10.1073/pnas.1722335115 ; PMID: 29686086
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A654G6E3
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G6E3
- EnsemblPlants: AT5G36890.1
- Gramene: AT5G36890.1
- KEGG: ath:AT5G36890
- Orthologous matrix: HGSNDFY
- ExpressionAtlas: AT5G36890
- InterPro: IPR001360, IPR017736, IPR017853
- PANTHER: PTHR10353, PTHR10353:SF310
- SUPFAM: SSF51445
- PROSITE: PS00653
- Gene3D: 3.20.20.80
- SWISS-MODEL: A0A654G6E3
Sequences
cDNA Sequence
- >AT5G36890.2
TTGATGCATTCTATTAAAATTGGTAGACCAAAACATTCGGGCTGATTTTGGCCTTCTTTCTGATATTTATTTATCTCCGAAACTTTTGCTTCTTAAGTCTGTCTCTCTCTTCTATCAGATTCCACACTAATCGGAAAAAATGGCACAGAAGCTTAACTTGCTTAATCTCGCCGTCCCTCCGGTCACCCACCGCTCTAACTTCCCTTCCACCTTCACCTTCGGCGTCGCCACTTCCGCTTACCAGATTGAAGGAGGTTGGAATGAAGGTAAAAAGGGACCAAGTATATGGGATAAGTTCACTCATATCGAAGGGAAGATTCTTGATGGAAGTAACGGCGATGTTGCTGTGGATCATTACCATAGATACAAGGAAGATGTTGATCTTATAGGACAATTAGGATTCGGTGCTTACAGATTTTCTATATCTTGGTCTCGAATTTTCCCTGATGGCCTGGGAACTGAAGTCAATGAAGAAGGCATTGCTTTCTACAACGATCTTATTAATACACTTCTTGAAAAAGGTATTCAGCCGTATGTAACTCTGTACCATTGGGATCTCCCATCACATCTCCAGGAAGCAATCGGAGGTTGGACAAATAGGAAAATTGTCGATTATTTTGGCCTCTATGCAGATGCTTGTTTTGCCAATTTTGGTGATAGAGTGAAGCACTGGATCACATTAAATGAACCTCTTCAGACCTCGGTGAATGGACACTGTATTGGTATATTTGCACCTGGAAGAAATGAGAAGCCCTTGATCGAACCATATTTGGTCTCACATCATCAGGTTCTGGCCCATGCAACTGCTGTATCCATATATAGAAGCAAGTACAAGGAAAGTCAAGGTGGACAAATCGGTTTGTCAGTTGATTGTGAATGGGCAGAGCCAAACTCTGAGAAACCAGAAGACAAGGTTGCTGCGGATAGGCGAATTGACTTTCAACTTGGATGGTTCTTGGATCCTTTGTTTTTTGGAGACTATCCTGCAAGTATGCGCCAGAAACTTGGAGACAATCTTCCTAGATTTACTCCGGAAGAAAAGGAGTTTATGCTTCAAAACTCATGGGACTTCCTTGGCCTGAACCACTATACGTCGAGGTTGATTTCTCATGTCTCAAACAAAGAAGCTGAGAGTAACTTTTACCAAGCACAAGAATTGGAGAGGATTGTTGAACTGGAAAATGGAGATTTGATAGGCGAAAGGGCTGCTTCGGATTGGCTTTATGCTGTGCCTTGGGGAATCCGAAAGACATTGAATTACATGAGCAAAAAATATAACCACCCTCCAATATTTATCACTGAAAATGGTATGGATGATGAAGATGATGGATCGGCCTCTATTCATGATATGCTTGACGATAAACGTAGAGTTGACTATTTCAAGAGTTACCTTGCCAACGTCTCCCAGGCTATTGAAGACGGAGTGGACATAAAGGGATACTTTGCGTGGTCGCTGCTGGACAACTTCGAGTGGGCGCAAGGGTACACCAAGAGATTTGGTTTGGTATATGTAGACTACAAGAACGGTTTAACCCGTCACCCAAAATCATCTGCTTACTGGTTCATGAAATTTCTGAAAGGTGATGAAGAAAACAAAGAATAAGCATGACGATAAGACTGATGAAGCCATTGTTCAACCAGATTCTGTCACATTCTAGGAACCTATGTTGACTGGAGGATCAAGCTTGAATGTTATTTTGTTTTGCATCTAATATGACGACACAACACGCTTTTAAGTTTCAAATTCTCAATAATACTCAAATAAGAAGTTCATATAATTACATTACTTGATTCCCATTATCTTAACTGTTTCCTTTAATTTGAAACTGATCTGTATGCTG - >AT5G36890.1
TTGATGCATTCTATTAAAATTGGTAGACCAAAACATTCGGGCTGATTTTGGCCTTCTTTCTGATATTTATTTATCTCCGAAACTTTTGCTTCTTAAGTCTGTCTCTCTCTTCTATCAGATTCCACACTAATCGGAAAAAATGGCACAGAAGCTTAACTTGCTTAATCTCGCCGTCCCTCCGGTCACCCACCGCTCTAACTTCCCTTCCACCTTCACCTTCGGCGTCGCCACTTCCGCTTACCAGATTGAAGGAGGTTGGAATGAAGGTAAAAAGGGACCAAGTATATGGGATAAGTTCACTCATATCGAAGGGAAGATTCTTGATGGAAGTAACGGCGATGTTGCTGTGGATCATTACCATAGATACAAGGAAGATGTTGATCTTATAGGACAATTAGGATTCGGTGCTTACAGATTTTCTATATCTTGGTCTCGAATTTTCCCTGATGGCCTGGGAACTGAAGTCAATGAAGAAGGCATTGCTTTCTACAACGATCTTATTAATACACTTCTTGAAAAAGGTATTCAGCCGTATGTAACTCTGTACCATTGGGATCTCCCATCACATCTCCAGGAAGCAATCGGAGGTTGGACAAATAGGAAAATTGTCGATTATTTTGGCCTCTATGCAGATGCTTGTTTTGCCAATTTTGGTGATAGAGTGAAGCACTGGATCACATTAAATGAACCTCTTCAGACCTCGGTGAATGGACACTGTATTGGTATATTTGCACCTGGAAGAAATGAGAAGCCCTTGATCGAACCATATTTGGTCTCACATCATCAGGTTCTGGCCCATGCAACTGCTGTATCCATATATAGAAGCAAGTACAAGGAAAGTCAAGGTGGACAAATCGGTTTGTCAGTTGATTGTGAATGGGCAGAGCCAAACTCTGAGAAACCAGAAGACAAGGTTGCTGCGGATAGGCGAATTGACTTTCAACTTGGATGGTTCTTGGATCCTTTGTTTTTTGGAGACTATCCTGCAAGTATGCGCCAGAAACTTGGAGACAATCTTCCTAGATTTACTCCGGAAGAAAAGGAGTTTATGCTTCAAAACTCATGGGACTTCCTTGGCCTGAACCACTATACGTCGAGGTTGATTTCTCATGTCTCAAACAAAGAAGCTGAGAGTAACTTTTACCAAGCACAAGAATTGGAGAGGATTGTTGAACTGGAAAATGGAGATTTGATAGGCGAAAGGGCTGCTTCGGATTGGCTTTATGCTGTGCCTTGGGGAATCCGAAAGACATTGAATTACATGAGCAAAAAATATAACCACCCTCCAATATTTATCACTGAAAATGGTATGGATGATGAAGATGATGGATCGGCCTCTATTCATGATATGCTTGACGATAAACGTAGAGTTGACTATTTCAAGAGTTACCTTGCCAACGTCTCCCAGGCTATTGAAGACGGAGTGGACATAAAGGGATACTTTGCGTGGTCGCTGCTGGACAACTTCGAGTGGGCGCAAGGGTACACCAAGAGATTTGGTTTGGTATATGTAGACTACAAGAACGGTTTAACCCGTCACCCAAAATCATCTGCTTACTGGTTCATGAAATTTCTGAAAGGTGATGAAGAAAACAAAGAATAAGCATGACGATAAGACTGATGAAGCCATTGTTCAACCAGATTCTGTCACATTCTAGGAACCTATGTTGACTGGAGGATCAAGCTTGAATGTTATTTTGTTTTGCATCTAATATGACGACACAACACGCTTTTAAGTTTCAAATTCTCAATAATACTCAAATAAGAAGTTCATATAATTACATTACTTGATTCCCATTATCTTAACTGTTTCCTTTAATTTGAAACTGATCTGTATGCTG
CDS Sequence
Protein Sequence