Gene Details:
- Gene ID: AT5G36170
- Gene Symbol: ATPRFB, HCF109
- Gene Name: high chlorophyll fluorescent 109
- Description: high chlorophyll fluorescent 109;(source:Araport11)
- TAIR Accession: locus:2158936
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0006396 — acts upstream of or within — RNA processing
- GO:0009570 — located in — chloroplast stroma
- GO:0003747 — enables — translation release factor activity
- GO:0009657 — acts upstream of or within — plastid organization
- GO:0006415 — involved in — translational termination
- GO:0006415 — acts upstream of or within — translational termination
- GO:0016149 — enables — translation release factor activity, codon specific
Function-related keywords:
Literature:
- Plant mitochondrial genes can be expressed from mRNAs lacking stop codons. DOI: 10.1016/j.febslet.2006.09.010 ; PMID: 17007845
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
Sequences:
cDNA Sequence
- >AT5G36170.3
CGTGGCTGCTAGCTTTGTATGGATAACTTGGCAAAGGTCAGAAATCTGAAGAAAAGCTTTGAGCAGAAACATGTCCATGGAGCTCACCGTTCTCGGACCCCTCGCCGGTCGGAGTTTCGCAATCGCCGGAAAACCTAAACTTCTGCTTCTTCGACCAACAAACCTCCCTCTTCTCCGTCTCTCACTCCCGCTTTCTCTTCCCAATTTCTCTTCGTCCTCTCGTTTTAATTCGCCCATAGTATTCGCTGCACAGGAGAGTAACTTGAGTGTATCCAACGAAAACGAAACCAGTGAGTGGCTGATGCAAGATTTTTATACATTGAGAAAAGATGTAGAAATAGCATCAGCTCGTGTTGAAGAGATTAGAGCTTCTGCTAATTTACAACAACTAGAACAAGAGATTACAAATCTGGAATCAAAAGCTACTGATACATCGTTTTGGGATGATCGTACTAAAGCTCAAGAAACTTTATCGTCTTTAAATGATCTTAAAGATCGTATGCGGTTACTCTCTGAGTTCAAAACGATGGTTGAAGATGCCGAAACGATTGTTAAACTAACAGAAGAGATGGACTCTACTGATGTTAGTTTACTTGAAGAAGCCATGGGAATCATTAAAGAGTTGAATAAATCTTTAGATAAATTTGAGCTTACTCAGCTTTTATCAGGACCTTATGACAAAGAAGGTGCTGTTGTTTACATTACAGCTGGAGCTGGAGGAACAGATGCACAGGATTGGGCTGATATGTTGCTTAGGATGTATATGAGATGGGGAGAGAAGCAGCGGTACAAGACGAAAGTTGTTGAAATGTCTAATGGAGAAGAGGCAGGGATTAAGTCAGCGACTCTTGAAATTGAAGGGCGTTATGCATATGGTTACATTTCAGGGGAGAAAGGAACTCATAGGATTGTCCGACAATCGCCTTTCAATTCGAAAGGTCTTCGCCAGACAAGCTTTTCTGGTGTGGAAGTGATGCCGCTTTTGCCTGAGGAAGCGGTGGGAATCGAAATACCAGAAGAGGACCTTGACATTAGTTTCACGAGGGCAGGTGGGAAAGGAGGACAGAATGTTAACAAGGTTGAAACTGCTGTACGGATTACTCATATCCCTACTGGTGTTGCTGTTCGTTGCACAGATCGCGTTGGATGTTGCAGAGGAGAGAAGTCAACTGGCGAACAAGACGAGAGCTCTGATCAGACTAAAAGCGAAACTGATGGTGATTGCGGAGGAGCAACGTGCTACTGAAATCAAGGAAATAAGAGGAGATGCAGTGAAAGCTGAATGGGGACAGCAGATCAGGAACTACGTGTTTCATCCGTACAAACTCGTTAAGGATGTCCGAACAGGTCATGAAACTTCTGATATCACATCTGTAATGGATGGTGACTTGGACCCTTTCATCAAAGCTTACCTTAAGCATAAGTACACCTTAGCCATGGCTTCTGCTGTAACCAATTAGAATGCTGAGGATAGGCTTGTTCCTTTATATTTCTCTACTTAGATAGAAATCATCTCCTACTAGACTGTTCAATTTTATAGCATAATCTTGAATTCCAACAGTCAATGTGGGATTGTGAGTCAAGTCTGTTTGTATCTAAATAAAACCGCATTTTGTTTTAAACAAAACGAAACATAAAACTAACCATAAGCCCTACCAAACCATATTAAAAACCATTGAGGGTAATAAAACTTCG - >AT5G36170.1
CGTGGCTGCTAGCTTTGTATGGATAACTTGGCAAAGGTCAGAAATCTGAAGAAAAGCTTTGAGCAGAAACATGTCCATGGAGCTCACCGTTCTCGGACCCCTCGCCGGTCGGAGTTTCGCAATCGCCGGAAAACCTAAACTTCTGCTTCTTCGACCAACAAACCTCCCTCTTCTCCGTCTCTCACTCCCGCTTTCTCTTCCCAATTTCTCTTCGTCCTCTCGTTTTAATTCGCCCATAGTATTCGCTGCACAGGAGAGTAACTTGAGTGTATCCAACGAAAACGAAACCAGTGAGTGGCTGATGCAAGATTTTTATACATTGAGAAAAGATGTAGAAATAGCATCAGCTCGTGTTGAAGAGATTAGAGCTTCTGCTAATTTACAACAACTAGAACAAGAGATTACAAATCTGGAATCAAAAGCTACTGATACATCGTTTTGGGATGATCGTACTAAAGCTCAAGAAACTTTATCGTCTTTAAATGATCTTAAAGATCGTATGCGGTTACTCTCTGAGTTCAAAACGATGGTTGAAGATGCCGAAACGATTGTTAAACTAACAGAAGAGATGGACTCTACTGATGTTAGTTTACTTGAAGAAGCCATGGGAATCATTAAAGAGTTGAATAAATCTTTAGATAAATTTGAGCTTACTCAGCTTTTATCAGGACCTTATGACAAAGAAGGTGCTGTTGTTTACATTACAGCTGGAGCTGGAGGAACAGATGCACAGGATTGGGCTGATATGTTGCTTAGGATGTATATGAGATGGGGAGAGAAGCAGCGGTACAAGACGAAAGTTGTTGAAATGTCTAATGGAGAAGAGGCAGGGATTAAGTCAGCGACTCTTGAAATTGAAGGGCGTTATGCATATGGTTACATTTCAGGGGAGAAAGGAACTCATAGGATTGTCCGACAATCGCCTTTCAATTCGAAAGGTCTTCGCCAGACAAGCTTTTCTGGTGTGGAAGTGATGCCGCTTTTGCCTGAGGAAGCGGTGGGAATCGAAATACCAGAAGAGGACCTTGACATTAGTTTCACGAGGGCAGGTGGGAAAGGAGGACAGAATGTTAACAAGGTTGAAACTGCTGTACGGATTACTCATATCCCTACTGGTGTTGCTGTTCGTTGCACAGATCGCGTTGGATGTTGCAGAGGAGAGAAGTCAACTGGCGAACAAGACGAGAGCTCTGATCAGACTAAAAGCGAAACTGATGGTGATTGCGGAGGAGCAACGTGCTACTGAAATCAAGGAAATAAGAGGAGATGCAGTGAAAGCTGAATGGGGACAGCAGATCAGGAACTACGTGTTTCATCCGTACAAACTCGTTAAGGATGTCCGAACAGGTCATGAAACTTCTGATATCACATCTGTAATGGATGGTGACTTGGACCCTTTCATCAAAGCTTACCTTAAGCATAAGTACACCTTAGCCATGGCTTCTGCTGTAACCAATTAGAATGCTGAGGATAGGCTTGTTCCTTTATATTTCTCTACTTAGATAGAAATCATCTCCTACTAGACTGTTCAATTTTATAGCATAATCTTGAATTCCAACAGTCAATGTGGGATTGTGAGTCAAGTCTGTTTGTATCTAAATAAAACCGCATTTTGTTTTAAACAAAACGAAACATAAAACTAACCATAAGCCCTACCAAACCATATTAAAAACCATTGAGGGTAATAAAACTTCG - >AT5G36170.2
CGTGGCTGCTAGCTTTGTATGGATAACTTGGCAAAGGTCAGAAATCTGAAGAAAAGCTTTGAGCAGAAACATGTCCATGGAGCTCACCGTTCTCGGACCCCTCGCCGGTCGGAGTTTCGCAATCGCCGGAAAACCTAAACTTCTGCTTCTTCGACCAACAAACCTCCCTCTTCTCCGTCTCTCACTCCCGCTTTCTCTTCCCAATTTCTCTTCGTCCTCTCGTTTTAATTCGCCCATAGTATTCGCTGCACAGGAGAGTAACTTGAGTGTATCCAACGAAAACGAAACCAGTGAGTGGCTGATGCAAGATTTTTATACATTGAGAAAAGATGTAGAAATAGCATCAGCTCGTGTTGAAGAGATTAGAGCTTCTGCTAATTTACAACAACTAGAACAAGAGATTACAAATCTGGAATCAAAAGCTACTGATACATCGTTTTGGGATGATCGTACTAAAGCTCAAGAAACTTTATCGTCTTTAAATGATCTTAAAGATCGTATGCGGTTACTCTCTGAGTTCAAAACGATGGTTGAAGATGCCGAAACGATTGTTAAACTAACAGAAGAGATGGACTCTACTGATGTTAGTTTACTTGAAGAAGCCATGGGAATCATTAAAGAGTTGAATAAATCTTTAGATAAATTTGAGCTTACTCAGCTTTTATCAGGACCTTATGACAAAGAAGGTGCTGTTGTTTACATTACAGCTGGAGCTGGAGGAACAGATGCACAGGATTGGGCTGATATGTTGCTTAGGATGTATATGAGATGGGGAGAGAAGCAGCGGTACAAGACGAAAGTTGTTGAAATGTCTAATGGAGAAGAGGCAGGGATTAAGTCAGCGACTCTTGAAATTGAAGGGCGTTATGCATATGGTTACATTTCAGGGGAGAAAGGAACTCATAGGATTGTCCGACAATCGCCTTTCAATTCGAAAGGTCTTCGCCAGACAAGCTTTTCTGGTGTGGAAGTGATGCCGCTTTTGCCTGAGGAAGCGGTGGGAATCGAAATACCAGAAGAGGACCTTGACATTAGTTTCACGAGGGCAGGTGGGAAAGGAGGACAGAATGTTAACAAGGTTGAAACTGCTGTACGGATTACTCATATCCCTACTGGTGTTGCTGTTCGTTGCACAGATCGCGTTGGATGTTGCAGAGGAGAGAAGTCAACTGGCGAACAAGACGAGAGCTCTGATCAGACTAAAAGCGAAACTGATGGTGATTGCGGAGGAGCAACGTGCTACTGAAATCAAGGAAATAAGAGGAGATGCAGTGAAAGCTGAATGGGGACAGCAGATCAGGAACTACGTGTTTCATCCGTACAAACTCGTTAAGGATGTCCGAACAGGTCATGAAACTTCTGATATCACATCTGTAATGGATGGTGACTTGGACCCTTTCATCAAAGCTTACCTTAAGCATAAGTACACCTTAGCCATGGCTTCTGCTGTAACCAATTAGAATGCTGAGGATAGGCTTGTTCCTTTATATTTCTCTACTTAGATAGAAATCATCTCCTACTAGACTGTTCAATTTTATAGCATAATCTTGAATTCCAACAGTCAATGTGGGATTGTGAGTCAAGTCTGTTTGTATCTAAATAAAACCGCATTTTGTTTTAAACAAAACGAAACATAAAACTAACCATAAGCCCTACCAAACCATATTAAAAACCATTGAGGGTAATAAAACTTCG - >AT5G36170.4
CGTGGCTGCTAGCTTTGTATGGATAACTTGGCAAAGGTCAGAAATCTGAAGAAAAGCTTTGAGCAGAAACATGTCCATGGAGCTCACCGTTCTCGGACCCCTCGCCGGTCGGAGTTTCGCAATCGCCGGAAAACCTAAACTTCTGCTTCTTCGACCAACAAACCTCCCTCTTCTCCGTCTCTCACTCCCGCTTTCTCTTCCCAATTTCTCTTCGTCCTCTCGTTTTAATTCGCCCATAGTATTCGCTGCACAGGAGAGTAACTTGAGTGTATCCAACGAAAACGAAACCAGTGAGTGGCTGATGCAAGATTTTTATACATTGAGAAAAGATGTAGAAATAGCATCAGCTCGTGTTGAAGAGATTAGAGCTTCTGCTAATTTACAACAACTAGAACAAGAGATTACAAATCTGGAATCAAAAGCTACTGATACATCGTTTTGGGATGATCGTACTAAAGCTCAAGAAACTTTATCGTCTTTAAATGATCTTAAAGATCGTATGCGGTTACTCTCTGAGTTCAAAACGATGGTTGAAGATGCCGAAACGATTGTTAAACTAACAGAAGAGATGGACTCTACTGATGTTAGTTTACTTGAAGAAGCCATGGGAATCATTAAAGAGTTGAATAAATCTTTAGATAAATTTGAGCTTACTCAGCTTTTATCAGGACCTTATGACAAAGAAGGTGCTGTTGTTTACATTACAGCTGGAGCTGGAGGAACAGATGCACAGGATTGGGCTGATATGTTGCTTAGGATGTATATGAGATGGGGAGAGAAGCAGCGGTACAAGACGAAAGTTGTTGAAATGTCTAATGGAGAAGAGGCAGGGATTAAGTCAGCGACTCTTGAAATTGAAGGGCGTTATGCATATGGTTACATTTCAGGGGAGAAAGGAACTCATAGGATTGTCCGACAATCGCCTTTCAATTCGAAAGGTCTTCGCCAGACAAGCTTTTCTGGTGTGGAAGTGATGCCGCTTTTGCCTGAGGAAGCGGTGGGAATCGAAATACCAGAAGAGGACCTTGACATTAGTTTCACGAGGGCAGGTGGGAAAGGAGGACAGAATGTTAACAAGGTTGAAACTGCTGTACGGATTACTCATATCCCTACTGGTGTTGCTGTTCGTTGCACAGATCGCGTTGGATGTTGCAGAGGAGAGAAGTCAACTGGCGAACAAGACGAGAGCTCTGATCAGACTAAAAGCGAAACTGATGGTGATTGCGGAGGAGCAACGTGCTACTGAAATCAAGGAAATAAGAGGAGATGCAGTGAAAGCTGAATGGGGACAGCAGATCAGGAACTACGTGTTTCATCCGTACAAACTCGTTAAGGATGTCCGAACAGGTCATGAAACTTCTGATATCACATCTGTAATGGATGGTGACTTGGACCCTTTCATCAAAGCTTACCTTAAGCATAAGTACACCTTAGCCATGGCTTCTGCTGTAACCAATTAGAATGCTGAGGATAGGCTTGTTCCTTTATATTTCTCTACTTAGATAGAAATCATCTCCTACTAGACTGTTCAATTTTATAGCATAATCTTGAATTCCAACAGTCAATGTGGGATTGTGAGTCAAGTCTGTTTGTATCTAAATAAAACCGCATTTTGTTTTAAACAAAACGAAACATAAAACTAACCATAAGCCCTACCAAACCATATTAAAAACCATTGAGGGTAATAAAACTTCG
CDS Sequence
Protein Sequence