AT5G35910

Gene Details

Gene ID: AT5G35910
Gene Symbol: AtRRP6L2, RRP6L2
Gene Name: RRP6-like 2
Description: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11)
TAIR Accession: locus:2165189
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

GO:0000467 — involved in — exonucleolytic trimming to generate mature 3-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000467 27813 P other metabolic processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent CUT catabolic process GO:0071039 32922 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent tRNA catabolic process GO:0071038 32921 P other metabolic processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in histone mRNA catabolic process GO:0071044 32927 P other cellular processes IBA none PANTHER:PTN000252264|UniProtKB:Q01780|SGD:S000005527 Communication:501741973 2023-04-13 AT5G35910 locus:2165189 AT5G35910 involved in exonucleolytic trimming to generate mature 3-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003727 — enables — single-stranded RNA binding
GO:0005634 — located in — nucleus
GO:0071037 — involved in — nuclear polyadenylation-dependent snRNA catabolic process
GO:0071044 — involved in — histone mRNA catabolic process
GO:0071036 — involved in — nuclear polyadenylation-dependent snoRNA catabolic process
GO:0071040 — involved in — nuclear polyadenylation-dependent antisense transcript catabolic process
GO:0071035 — involved in — nuclear polyadenylation-dependent rRNA catabolic process
GO:0000175 — enables — 3-5-RNA exonuclease activity
GO:0043633 — involved in — polyadenylation-dependent RNA catabolic process
GO:0000176 — part of — nuclear exosome (RNase complex)
GO:0071039 — involved in — nuclear polyadenylation-dependent CUT catabolic process
GO:0071038 — involved in — nuclear polyadenylation-dependent tRNA catabolic process
GO:0006364 — acts upstream of or within — rRNA processing
GO:0005730 — is active in — nucleolus
GO:0071051 — involved in — polyadenylation-dependent snoRNA 3-end processing GO:0071051 32934 P other metabolic processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent snRNA catabolic process GO:0071037 32920 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 located in cytoplasm GO:0005737 231 C cytoplasm IDA none Publication:501724110|PMID:18285452 2016-08-01 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent antisense transcript catabolic process GO:0071040 32923 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent antisense transcript catabolic process GO:0071040 32923 P other metabolic processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 located in nucleolus GO:0005730 527 C nucleolus IDA localization of GFP/YFP fusion protein Publication:501724110|PMID:18285452 TAIR 2015-06-03 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent antisense transcript catabolic process GO:0071040 32923 P catabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent tRNA catabolic process GO:0071038 32921 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 gene:2165188 AT5G35910.1 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent rRNA catabolic process GO:0071035 32918 P catabolic process IBA none PANTHER:PTN000252264|UniProtKB:Q01780|SGD:S000005527 Communication:501741973 2023-04-13 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent CUT catabolic process GO:0071039 32922 P other metabolic processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent snRNA catabolic process GO:0071037 32920 P catabolic process IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in polyadenylation-dependent RNA catabolic process GO:0043633 23376 P catabolic process IMP none Publication:501724110|PMID:18285452 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in histone mRNA catabolic process GO:0071044 32927 P catabolic process IBA none PANTHER:PTN000252264|UniProtKB:Q01780|SGD:S000005527 Communication:501741973 2023-04-13 AT5G35910 locus:2165189 AT5G35910 involved in nuclear polyadenylation-dependent tRNA catabolic process GO:0071038 32921 P other cellular processes IBA none PANTHER:PTN000252264|SGD:S000005527 Communication:501741973 2021-03-31 AT5G35910 locus:2165189 AT5G35910 involved in polyadenylation-dependent snoRNA 3-end processing

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT5G35910.1
ATTGAATAATGTTCCTAAAACCCTAGCCAAGCCCAGAGATACCCTAAAATCACAATTCTCTGATTTGATCTTTTCTCCAGCGGAGATAATGAGCGACGGTAACATGGACGTCGACGAATCACCAGTCTCTTGGAAGGTAAAGTCTCTGGAGAAATTAATCGATGGTTCTTCTTTCTCTTCGACTCTCTCGAGACTCTCATCGTCTTCTCGCCTAATTCCAACGAGTAGAGATTTTCACTTTTACTACAATTTCGATGAGTTCAAACGCCCAATCGATGAGATAACTGGAACCTCGCAATCAACTCTTGCAACGATCGGTGATTCCGAGCAAGTTTGGGGGAAATCGATGAAGTTTCCTGGCGATGTTGATGACGTATATGCGGAGGATTGGTTATGTAACGTGAATGATGAATTGATTGAGAGATTTGATGTTTCTGTTGATGAGTTTCAGAGGATTAGGAAGAAAGAGAAGGAAATTGGTAGGTCTGTTGTTGCTGATGATGGAGATGATGGGTTTCAGATGGTTTATGGGAAGAAGAAGAAGCCTGTTGGTAATGTGGTTACTGGCTCGGCAGCGGTTAATGGTGGTGGTTCTGTGATTGATGTTAAGATGGCTGAGAGGGATAAGAATTCATCTGGTAAGGCTAAAGTTCCTTTTCATGTACCAACTATAAAGAAGCCTCAAGAGGAGTATAACATATTGGTGAACAATGCGAATCTACCGTTTGAGCATGTTTGGTTGGAGAGGAGCGAGGATGATCTGCGGGCTATGCATCCTTTGGAGAAATTTTCAGTGCTTGACTTCGTTGACAAAGATGTAAACGAGATGGAACCTGTGAAGCCCCTTCCACTGGAACAGACTCCATTCAAGTTCGTCCAGGAAGTGAAAGATCTGAAAGAATTAGTTGCCAAACTGCGTAGTGTTGAAGAGTTTGCGGTTGATCTGGAGCATAATCAGTATAGATCTTTTCAAGGATTGACATGCTTGATGCAAATTTCCACCAGAACAGAGGATTATATAGTTGATACATTTAAGCTTCGTATTCACATTGGGCCTTATCTAAGGGAGATATTCAAAGACCCTAAAAAGAAAAAGGTAATGCATGGAGCAGATCGAGATATTATCTGGCTTCAACGGGACTTCGGCATATATGTCTGCAATCTCTTTGACACAGGACAGGCCTCCAGGGTTCTAAATTTGGAGAGAAATAGCCTGGAGTTTCTTTTGCAGCATTTTTGTGGAGTGACTGCAAATAAAGAGTACCAAAATGCAGACTGGAGAATAAGACCCCTTCCAGAGGAAATGACAAGATATGCAAGAGAAGATACCCACTACCTCTTATACATATATGATTTAATCAAACTAGAACTGCAGAGAATGGCAAAGGATGACGCGCATACTGACTCTCCTCTACTTGAGGTCTACAAGCGGAGTTACGATGTGTGCACACAACTATATGAGAAAGAGTTATTGACCGAGAATTCATATCTTCACGTATATGGGCTTCAAGCAGCGGGCTTTAATGCAGCTCAACTTGCCATTGTTGCGGGGCTTTGTGAATGGAGGGATTTCATTGCACGTGCGGAGGATGAGAGCACTGGTTATGTATTGCCAAACAAAGTTCTCCTTGAAATAGCCAAGGAGATGCCTGATAGTGTTGGAAAATTGCGTCGGATGTTGAAGTCAAAGCATCCTTATATCGAGCGTAATGTTGATTCGGTGGTCAGTGTCATCAGGCAATCAATGCAACATTATGCAGCATTTGAGTCTGCTGCTCTATCTTTAAAAGATGTGTCTCCTGGAAATGTAATGGATAAGAATATTGAACCTATAAGTGAGAAGAAAGACCTGCACACAGGAGATGTGGCTTCTCCAAGTCTGAAGGAAAATTCTTCGCAGCTTGAGAGTACCAGGGACCTAATTATGGGTGCAGCAAATACTAATGAAGGGAGAGGTTTAGGATCCGGCTTGTTTGGTTCTGCTAAGGTTTCTGCGGCTGTTCGGATCTCTAAGAAACCAAGCAGTGGTTTAGGAGCTTTGCTGGGAAATGCAGCCTCCAAGAAGAAATCTCGAACTGATGAGAAGGTGAAGGAAGATGTGAAGCTCGAACAGATAAGATCATCTGTAAACCTGTCATTCCATTCGTTTACAGAGAAAGTTCCTGACTCAAAGTCAACTTCTGAAACATCTCCGAAAGTTTATGGGAAGCCTGAAGAGATGTCCAGTACTATGCCAGCCTCTGTTTCCAAGGAAGATGGTGTGAAAGAGTTGAAAGATGATTCAGAAGAAGCCTCAGAGATCGTTGGTACTTCTGGTAGAGTTTCAGAGTCCAAAGTGTCTAGCTCCGAGATGGGCGATATTATACTACTAGAAAATGGTGATGAGAAAAAAGTTGACGCTGAAGATGAACCAATGTCTCTCTCGGAGTTGTCCACAAACTTTCAGAAGTGCTTTAAATCCATGAATAAGAGCAAGAAGGCCCAAAAGCAGACCGAGTTTTTAAACATAGAGCCTTTTGATTATGAAGCTGCAAGGAAAGAGGTGAAATTTGGGGAAGGACACAAGGGAAGACAAGGAAAGAGAGAAGCTGCAGCAGGTCAGAAGAAGGGGTCTACACAGGAGCAGTCAGAGTTTGGTCAAGGAAAACGGCGTCAAGCTTTTCCGGCATCCGGGAACCGAAGTATGTCCTTTAAAAATTGATCTTCTGGCAGTCAATATTGATTGATGGTTCTGTTTAAGATCATTTATTTGTTTTGGTTGTGGGCTATGGTGAATTTTATGTTTTGATCGTTTTCATTTTATCAACTTCATAACTCAAACTTTGATGGGACTTAGGGATACAAACTCTTAGCTCAAACCATCAAATCTGATTCATAGTTAAGATTATGAACCAGTCTCCTTGTGCTTTTATATATATATCTAGTTTAGTGTCTGGCTTGAAGTAGTAAAGTTCTTGTTCCAGTCAATTGTTTTACTCAACTTTCATTCTCAAGTTTT

CDS Sequence

Protein Sequence